G53640


Basic Information

Item Value
gene id G53640
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 27831285 ~ 27833181 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU71704
TATTTCATATAGAGATAAAGAAATATATCTGAAAACTAAAACAGAAAAGTCGGTGCAACAGCcacagtgcagagagagagagagagagagagatacactgTCATTAGTATGAACAAGATCTGATGGTGCAAAAGTAGGGacagataaagaaaaaataaataaataaagggaaaacattGCGGTGATGCAGATCAGCCTCATCTGTAATCTGTCATTCATTTTAGGGCAGGAAAACAGCATTCATAGAGTCCAGGAGACAGGTGTTACCCCAAAGTCACTATTTTACCAAACAATTAGATTGTAACGTGATTTGTTGCCTACCTGGCTAAAAAATAAGTCAAGCTACTAAAATACGTGACTACACCACTACACCGTATAACTCATAATAAAACCATAGTTACATGTGACTTACAAATGACTGATTTTATGTCATGCTGATGTAGTCACGTAACTAAATTCTTGACTCGACGAAGCCCTCTGATAGCTACTGTAGTAATCGATTTGCACCTGCAAATGAAGACTAGCAAATAAATCACTTTAAAGTATAATTGTCGAAGAATTGTTTCCCCCCTGGTTATATTAAAATCCCATTTATTCGAGTTTACATAAAGATTGGTAAGTAACTTGACATTCATCTGCACTTTGACAGAAAACCAACCAGGGAAAATCTAACTGTTTGGTTAAAACCGAGAAAGCACCGGCTGAGGTTTAAATAACACGTCTACCTGGCCTGTCTGTGGTAATGTAACgtaatatactttattaatcccacaaggggaaattacaatgtggtGTGTCTCTTTAATAATGACAACACACTTATGAACCATGTATGTATGCCACACTGGAATCCTAGCAATCAAGTACCTGTtcattgactaaaaaggcttgCCCACTGACAAACCCAGTGACATCGTGCATTTCCCTCGCCTGTAGTTTTCCTAGTTTGGTAACACcaactgtaacacacacacacacacacacacacacacacacacacacacaccTTTCTTCTCTTTGAGGATGATTACAGCCAGAACAaatttaaatacagaaaaaaaacaaagggaaCAGGGATGGAGAGTGGAGGTTTGGCTGTGTGGCCAGGCTCAATCTGAAACCTCAGAGTGCCAACTACAACATTCTTACACATTCTCACTGATCAAATTACACAACTTCACAGTTATCTTCAGGCATCCATGTTCCAATGGGTTTTGCTGCATTGCTGCTTTTTATTGTGGCATCCGAGCTGAGTTGTGCCAGCAGCtaagatacaaaaaaaagatatcatGCTATTTCCAAGGTAACTTGCAATTAAAAATGGTGAGAATAACAGCATACAACTGTGATTGCGCTGTTACCATCTGTAATTACTGTATTCACTGGCAGTTTGAGATTTCAGATATTTAACTGGTGCTCTATATTCTGCACTATGAAGCTGAATTTGGATTAAATACCACAAGTCATCCATATTTAACTAAAGAATGGCCCCACACATACAAGGTAAACATCGTCTTGCCAAAACAAGAGCACAGGGAGCACAGGGAAATGAGCAGAAGGAACAAGGAGAAACATGATAGGACACACAGAATTTCACTCTAATATGGCTTATTACTTCCCATACAACACCTTCCATCAGGTGAAAAGCAACTCTCTCGTCCTGTTTTCCCAGGAGCATCTGTTCCTAAACTGCGACATTATCGCTTATTCTACAGCTCTACACATCAAGTCGCACTGCACCATTTGTCAAAAAGCAAATCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU71704 True 1761 lncRNA 0.39 2 27831285 27833181

Neighbor

gene id symbol gene type direction distance location
trnar-ccu_2 NA coding upstream 38721 27792492 ~ 27792564 (+)
trnar-ccu_1 NA coding upstream 67848 27763365 ~ 27763437 (+)
si:dkey-72l14.3 LOC100706739,LOC101069958,LOC103385031,LOC104952267 coding upstream 106822 27706496 ~ 27724463 (+)
trnam-cau_3 NA coding upstream 452318 27378896 ~ 27378967 (+)
trnam-cau_2 NA coding upstream 454991 27376223 ~ 27376294 (+)
soga1 NA coding downstream 366392 28199573 ~ 28304278 (+)
LOC120559025 NA coding downstream 529995 28363176 ~ 28377171 (+)
LOC120558753 NA coding downstream 557222 28390403 ~ 28399081 (+)
LOC120559027 NA coding downstream 587348 28420529 ~ 28442383 (+)
cep104 cep104 coding downstream 625980 28459161 ~ 28500476 (+)
G53629 NA non-coding upstream 16846 27811505 ~ 27814439 (+)
G53623 NA non-coding upstream 160701 27670369 ~ 27670584 (+)
G53596 NA non-coding upstream 169187 27661648 ~ 27662098 (+)
G53588 NA non-coding upstream 183956 27644756 ~ 27647329 (+)
G53586 arih2,LOC102785176 non-coding upstream 187321 27638846 ~ 27643964 (+)
G53645 NA non-coding downstream 10729 27843910 ~ 27844634 (+)
G53649 LOC102314191,LOC102208045,LOC101465377,LOC102783560 non-coding downstream 20297 27853478 ~ 27855141 (+)
G53681 NA non-coding downstream 112470 27945651 ~ 27945855 (+)
G53696 NA non-coding downstream 323532 28156713 ~ 28157933 (+)
G53734 NA non-coding downstream 363365 28196546 ~ 28196756 (+)
LOC120559343 NA other upstream 235876 27585525 ~ 27595409 (+)
LOC120559859 LOC101468803,LOC100690459 other upstream 413826 27412252 ~ 27417459 (+)
G53488 NA other upstream 575569 27255374 ~ 27255716 (+)
si:dkey-20d21.12 LOC101471973,LOC106098224,LOC107390607 other upstream 643342 27184494 ~ 27187943 (+)
G53305 NA other upstream 1030539 26800096 ~ 26800746 (+)
bsna bsn,LOC102782891,LOC106513106 other downstream 121218 27954399 ~ 28143801 (+)
casp9 LOC104954971 other downstream 486456 28319637 ~ 28322779 (+)
G53775 NA other downstream 508741 28341922 ~ 28345916 (+)
LOC120558754 NA other downstream 574090 28407271 ~ 28415747 (+)
nadka nadk other downstream 1463423 29296604 ~ 29323242 (+)

Expression


Co-expression Network