G53645


Basic Information

Item Value
gene id G53645
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 27843910 ~ 27844634 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU71709
CATCACATTTACAAAGAAGACAAACCACATACAAATAGGTTGTAATAGGGAAACATGCAACAAGGACACATTAAACAGCAACCTTCACTCAGATGTTACCACCAGCCCATAACTTTAAGTACTTGGCCTATAACTTTGATTTAGAAgcaacatttcattttaaaatcctagtCTAGTTCTATGGTGATAGTGGGTGTAAATTTAGCAATTTATAGTCATTGTGGATGGTAAATTGGAACATAATGGTTATGGATCAAATGAGATCTAATGAAACGCAGGTGTACATACAAAACCAAAACAGGTAGTTAGGTTCTGCAATTTAATTAGCATGCAAATGAGCCAGTGAGCTATGGGAATTCAGTCATTTGTTTCTGCAAAACCATCCCCCTCTGTGTGCAGGATATTAATCCAATGAAACGAGATACTCCTTGATGTTCACACCTCTCACTGGAAATGGAGGTCGATTTATTCATTACATTTATCTGTTTTATCCTCTTTTGGTGGGTGGAATAAACTATATATGACACCACCAACAAGCCAACAACTCAAGTAACCTGCAAAATAAAGGCTGGTGAATTTTGGGATTTACACTATTGTCAGGTGACACATTTGTTGGTTTTAATGCCCTAATTAAATTTTAAAGATTTCAATTCTACTAatccaaatttaaaataaataaacatctgcttgtatatatacaaatccaaatttaaaataaataaaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU71709 True 725 lncRNA 0.34 1 27843910 27844634

Neighbor

gene id symbol gene type direction distance location
trnar-ccu_2 NA coding upstream 51346 27792492 ~ 27792564 (+)
trnar-ccu_1 NA coding upstream 80473 27763365 ~ 27763437 (+)
si:dkey-72l14.3 LOC100706739,LOC101069958,LOC103385031,LOC104952267 coding upstream 119447 27706496 ~ 27724463 (+)
trnam-cau_3 NA coding upstream 464943 27378896 ~ 27378967 (+)
trnam-cau_2 NA coding upstream 467616 27376223 ~ 27376294 (+)
soga1 NA coding downstream 354939 28199573 ~ 28304278 (+)
LOC120559025 NA coding downstream 518542 28363176 ~ 28377171 (+)
LOC120558753 NA coding downstream 545769 28390403 ~ 28399081 (+)
LOC120559027 NA coding downstream 575895 28420529 ~ 28442383 (+)
cep104 cep104 coding downstream 614527 28459161 ~ 28500476 (+)
G53640 NA non-coding upstream 10729 27831285 ~ 27833181 (+)
G53629 NA non-coding upstream 29471 27811505 ~ 27814439 (+)
G53623 NA non-coding upstream 173326 27670369 ~ 27670584 (+)
G53596 NA non-coding upstream 181812 27661648 ~ 27662098 (+)
G53588 NA non-coding upstream 196581 27644756 ~ 27647329 (+)
G53649 LOC102314191,LOC102208045,LOC101465377,LOC102783560 non-coding downstream 8844 27853478 ~ 27855141 (+)
G53681 NA non-coding downstream 101017 27945651 ~ 27945855 (+)
G53696 NA non-coding downstream 312079 28156713 ~ 28157933 (+)
G53734 NA non-coding downstream 351912 28196546 ~ 28196756 (+)
G53770 NA non-coding downstream 480094 28324728 ~ 28324933 (+)
LOC120559343 NA other upstream 248501 27585525 ~ 27595409 (+)
LOC120559859 LOC101468803,LOC100690459 other upstream 426451 27412252 ~ 27417459 (+)
G53488 NA other upstream 588194 27255374 ~ 27255716 (+)
si:dkey-20d21.12 LOC101471973,LOC106098224,LOC107390607 other upstream 655967 27184494 ~ 27187943 (+)
G53305 NA other upstream 1043164 26800096 ~ 26800746 (+)
bsna bsn,LOC102782891,LOC106513106 other downstream 109765 27954399 ~ 28143801 (+)
casp9 LOC104954971 other downstream 475003 28319637 ~ 28322779 (+)
G53775 NA other downstream 497288 28341922 ~ 28345916 (+)
LOC120558754 NA other downstream 562637 28407271 ~ 28415747 (+)
nadka nadk other downstream 1451970 29296604 ~ 29323242 (+)

Expression


Co-expression Network