G53696


Basic Information

Item Value
gene id G53696
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 28156713 ~ 28157933 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU71770
GTCGGGCATGTCGTCTGCGTCATCGTTCTCTGctccctcctgctcctcATTTTTGTGCTTCCTGttgtctcctttcctctctgacTTCTTGTGGGCCTCATAGGCCTGAGGGTCGACACTCCACATGCACTCGGTCCACTTTCCATAGATTACACAGTGCTTCTTTTTaCTCTTATCCTGGATGTATCCCTCCACTTTGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU71770 True 201 lncRNA 0.51 3 28156713 28157933

Neighbor

gene id symbol gene type direction distance location
trnar-ccu_2 NA coding upstream 364149 27792492 ~ 27792564 (+)
trnar-ccu_1 NA coding upstream 393276 27763365 ~ 27763437 (+)
si:dkey-72l14.3 LOC100706739,LOC101069958,LOC103385031,LOC104952267 coding upstream 432250 27706496 ~ 27724463 (+)
trnam-cau_3 NA coding upstream 777746 27378896 ~ 27378967 (+)
trnam-cau_2 NA coding upstream 780419 27376223 ~ 27376294 (+)
soga1 NA coding downstream 41640 28199573 ~ 28304278 (+)
LOC120559025 NA coding downstream 205243 28363176 ~ 28377171 (+)
LOC120558753 NA coding downstream 232470 28390403 ~ 28399081 (+)
LOC120559027 NA coding downstream 262596 28420529 ~ 28442383 (+)
cep104 cep104 coding downstream 301228 28459161 ~ 28500476 (+)
G53681 NA non-coding upstream 210858 27945651 ~ 27945855 (+)
G53649 LOC102314191,LOC102208045,LOC101465377,LOC102783560 non-coding upstream 301572 27853478 ~ 27855141 (+)
G53645 NA non-coding upstream 312079 27843910 ~ 27844634 (+)
G53640 NA non-coding upstream 323532 27831285 ~ 27833181 (+)
G53629 NA non-coding upstream 342274 27811505 ~ 27814439 (+)
G53734 NA non-coding downstream 38613 28196546 ~ 28196756 (+)
G53770 NA non-coding downstream 166795 28324728 ~ 28324933 (+)
LOC120558758 NA non-coding downstream 288509 28446442 ~ 28454275 (+)
G53782 LOC103356136,LOC104946517,LOC101486029 non-coding downstream 342654 28500587 ~ 28502913 (+)
G53884 NA non-coding downstream 797627 28955560 ~ 28955816 (+)
bsna bsn,LOC102782891,LOC106513106 other upstream 12912 27954399 ~ 28143801 (+)
LOC120559343 NA other upstream 561304 27585525 ~ 27595409 (+)
LOC120559859 LOC101468803,LOC100690459 other upstream 739254 27412252 ~ 27417459 (+)
G53488 NA other upstream 900997 27255374 ~ 27255716 (+)
si:dkey-20d21.12 LOC101471973,LOC106098224,LOC107390607 other upstream 968770 27184494 ~ 27187943 (+)
casp9 LOC104954971 other downstream 161704 28319637 ~ 28322779 (+)
G53775 NA other downstream 183989 28341922 ~ 28345916 (+)
LOC120558754 NA other downstream 249338 28407271 ~ 28415747 (+)
nadka nadk other downstream 1138671 29296604 ~ 29323242 (+)
plekhm2 plekhm2 other downstream 1366090 29524023 ~ 29545886 (+)

Expression


Co-expression Network