G53884


Basic Information

Item Value
gene id G53884
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 28955560 ~ 28955816 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU72007
ggcccgctgcctcgcaacggagggacagagtcaggctacccgtgagagagaagagagagagatagagagagagtgatgcgggggggctcgctgccctgtcggagagtctgagcaggatggatcagagactgattacacacttaatttcagtgagagatgtgaggagaggaagagcaagggaaaaggagagatctggccgcgagggggggggcccatctaagatctcgtcccgggcccaggcaagactgtcagctggc

Function

NR:

description
PREDICTED: hepatic triacylglycerol lipase-like isoform X1

GO: NA

KEGG:

id description
ko05217 Basal cell carcinoma

RNA

RNA id representative length rna type GC content exon number start site end site
TU72007 True 257 lncRNA 0.59 1 28955560 28955816

Neighbor

gene id symbol gene type direction distance location
nphp4 nphp4 coding upstream 257651 28512047 ~ 28697909 (+)
c5h1orf174 NA coding upstream 447020 28504486 ~ 28508540 (+)
cep104 cep104 coding upstream 455084 28459161 ~ 28500476 (+)
LOC120559027 NA coding upstream 513177 28420529 ~ 28442383 (+)
LOC120558753 NA coding upstream 556479 28390403 ~ 28399081 (+)
cfap74 cfap74 coding downstream 227510 29183326 ~ 29245568 (+)
gnb1a gnb1,ol-gb1,gnb1a,LOC107385217,LOC103044197 coding downstream 295158 29250974 ~ 29294158 (+)
LOC120559728 slc35e2b coding downstream 383890 29339706 ~ 29348037 (+)
mad2l2 mad2l2 coding downstream 405182 29360998 ~ 29364410 (+)
tmem82 tmem82,LOC104921441 coding downstream 412639 29368455 ~ 29372181 (+)
G53782 LOC103356136,LOC104946517,LOC101486029 non-coding upstream 452647 28500587 ~ 28502913 (+)
LOC120558758 NA non-coding upstream 501285 28446442 ~ 28454275 (+)
G53770 NA non-coding upstream 630627 28324728 ~ 28324933 (+)
G53734 NA non-coding upstream 758804 28196546 ~ 28196756 (+)
G53696 NA non-coding upstream 797627 28156713 ~ 28157933 (+)
G53885 NA non-coding downstream 8820 28964636 ~ 28970345 (+)
G53897 NA non-coding downstream 149978 29105794 ~ 29106722 (+)
G53948 NA non-coding downstream 392718 29348534 ~ 29349109 (+)
G53956 NA non-coding downstream 416993 29372809 ~ 29373489 (+)
G53960 NA non-coding downstream 426936 29382752 ~ 29383131 (+)
LOC120558754 NA other upstream 539813 28407271 ~ 28415747 (+)
G53775 NA other upstream 609644 28341922 ~ 28345916 (+)
casp9 LOC104954971 other upstream 632781 28319637 ~ 28322779 (+)
bsna bsn,LOC102782891,LOC106513106 other upstream 811759 27954399 ~ 28143801 (+)
LOC120559343 NA other upstream 1360151 27585525 ~ 27595409 (+)
nadka nadk other downstream 340788 29296604 ~ 29323242 (+)
plekhm2 plekhm2 other downstream 568207 29524023 ~ 29545886 (+)
ano11 ano7l1,LOC102309663,LOC103367289,LOC103384790 other downstream 592928 29548744 ~ 29567773 (+)
G54103 LOC103366252 other downstream 796630 29752446 ~ 29758010 (+)
szrd1 LOC103366254,LOC108233026,LOC106518923,LOC101072016,LOC107390353 other downstream 814036 29769852 ~ 29782937 (+)

Expression


Co-expression Network