G53962


Basic Information

Item Value
gene id G53962
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 29383950 ~ 29384191 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU72102
GTTTGTTTTCCATTAAAATCTGGCACCGCCTTGAGTCTTAATAATTTTCCATTCTCTTGTTTGAACTGGACAAAGAATAAAACATATCCTTTTATTTAAAGAACCAGTACAATGAGGGTTTGTAAGTGTTGTTATATTAAACCATATTCCGCCCTGTGTTGGAACATCATGGCTAATTTGCTGATATAATGTGATCTGGATTCAAACAGTGGTAATTGCTGTCCTGTCCCGCTCATTACGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU72102 True 242 lncRNA 0.37 1 29383950 29384191

Neighbor

gene id symbol gene type direction distance location
tmem82 tmem82,LOC104921441 coding upstream 11769 29368455 ~ 29372181 (+)
mad2l2 mad2l2 coding upstream 19540 29360998 ~ 29364410 (+)
LOC120559728 slc35e2b coding upstream 35913 29339706 ~ 29348037 (+)
gnb1a gnb1,ol-gb1,gnb1a,LOC107385217,LOC103044197 coding upstream 89792 29250974 ~ 29294158 (+)
cfap74 cfap74 coding upstream 138382 29183326 ~ 29245568 (+)
epha2b LOC104966854 coding downstream 41285 29425476 ~ 29448947 (+)
fam131c fam131c coding downstream 76447 29460638 ~ 29473304 (+)
hspb7 hspb7 coding downstream 112400 29496591 ~ 29500461 (+)
zbtb17 zbtb17 coding downstream 118035 29502226 ~ 29517190 (+)
ddost ddost,LOC102799190 coding downstream 133488 29517679 ~ 29523452 (+)
G53960 NA non-coding upstream 819 29382752 ~ 29383131 (+)
G53956 NA non-coding upstream 10461 29372809 ~ 29373489 (+)
G53948 NA non-coding upstream 34841 29348534 ~ 29349109 (+)
G53897 NA non-coding upstream 277228 29105794 ~ 29106722 (+)
G53885 NA non-coding upstream 413605 28964636 ~ 28970345 (+)
G53963 NA non-coding downstream 24520 29408711 ~ 29409113 (+)
G54057 NA non-coding downstream 183984 29568175 ~ 29569618 (+)
G54079 mib2,LOC106936770,LOC103150490,LOC106926266 non-coding downstream 252336 29636527 ~ 29771801 (+)
G54094 LOC104942893 non-coding downstream 319057 29703248 ~ 29707067 (+)
G54101 ubiad1 non-coding downstream 352850 29737041 ~ 29739244 (+)
nadka nadk other upstream 60708 29296604 ~ 29323242 (+)
LOC120558754 NA other upstream 968203 28407271 ~ 28415747 (+)
G53775 NA other upstream 1038034 28341922 ~ 28345916 (+)
casp9 LOC104954971 other upstream 1061171 28319637 ~ 28322779 (+)
bsna bsn,LOC102782891,LOC106513106 other upstream 1240149 27954399 ~ 28143801 (+)
plekhm2 plekhm2 other downstream 139832 29524023 ~ 29545886 (+)
ano11 ano7l1,LOC102309663,LOC103367289,LOC103384790 other downstream 164553 29548744 ~ 29567773 (+)
G54103 LOC103366252 other downstream 368255 29752446 ~ 29758010 (+)
szrd1 LOC103366254,LOC108233026,LOC106518923,LOC101072016,LOC107390353 other downstream 385661 29769852 ~ 29782937 (+)
agrn agrn other downstream 830419 30214610 ~ 30486565 (+)

Expression


Co-expression Network