G54103 (LOC103366252)


Basic Information

Item Value
gene id G54103
gene name LOC103366252
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 29752446 ~ 29758010 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU72298
TCTGGGCCTCTTTTCCCCTGAAAGAACAAAGTACAGAGACAAAGTGTGCACTGCAAAGAATGACATCACTTTTGGACAGCGACTACCAAGTTGGGTTCAAGgctggatctttttttttttttttttgcacaacttccctcaattttttttctcctctggcAGCGTGCGGTTGTGTTTGACAGAGTTTATAAATATAGGGAGAACGGCAGACAAAACAAAGtttcaaactttatttctaccAAAAACATCGTCTCCCTGTCATCAAGTGACAGTCCTTAGTAAATTTCTCACATAATGCTGGATGGAAAGCACAGCCAATGCTGCATCATTATACAGTAGCTCAGGCAGCCAGGAAATACCAACCATTTAGAAAATCTGGTCCTCTCTCATGAAGTATAAaagggaaaataaaacaaaagtcaaaCATGAGAGCTACAATTCTAACAAATGTATGGTTGCGTATCCTATTTAAGAGCTAAAATGGACACATTTAAAATGGTGAAATGGCTTGAAAATACAGAGAACAAGCCAAAAAGTCGAGCGAAAATTCGGGAGATTCAACATGTTTGAGCCACCAGTCTTGCTGTGAGACAGTCCTGACTATTTGGTAACAGTTGTAGTTGATCAGATATGGATCTGGTTTACAGCTGTAAACCAGTGACACCGTCCAAGTCCCAGAACTGTTTGCTCCCGACAGCCAGGTATCCTGCAGTTTTGGGCTCAGAATTTGAGGCTAAATCCTGGACCGACTGCCGACACTCCCTGGTTGCTGGTTGTCAGGTGGAAGCCTGTGTCTTTGAGGTCGTCATCGCCCAGGTGACTGTAGCCCAGGCCTCCCTCGGGTGGACGAGGACTGGTGCCTCTCTTCACCCTCTGTTGCTCGCTCTTGGCCGGCCAGGTGGGGAACATGGACGGCTCGATAGGCAACGGCGTCTCGCGAAAGTACTCGTGCTTGAGCCCCTCGTCCGATAATATCCTCTTACTGGGGCAGTAGGTGAGGAATTTGTTCATGAGGTCAAAGCCTTGATCTGAGAGCAGCGCACCAAAGCGCTTTCGCAGATTGTTGTAGGGATACTCTGTAAAAGTCATCTTCTTCACAGCGGGCAGCTCGCCGTAGCCAGGCCAGATCTTCTCGCTGGGTGACCCCAGATcctTTAAAAACCTTGTTAATTTGGTCAATTTCAGATTTTCCAGGGAAGAGAGGTTTCTGGGTGAGGAGCTCGCCAAATATGCAGCCCACTGACCACATGTCCACAGCTGTGGAGTACTCCtgtggagagaaaaacaaacacagtggCAGACCGCAGAAACACAAAGTAGACAGTCTGCATGGCAAGCTTCTACGTTGGAGTCTGTCTCGTGTGTGAAAGTGGATGTGCTCTGATGGGCTCC
>TU72299
TCTGGGCCTCTTTTCCCCTGAAAGAACAAAGTACAGAGACAAAGTGTGCACTGCAAAGAATGACATCACTTTTGGACAGCGACTACCAAGTTGGGTTCAAGgctggatctttttttttttttttttgcacaacttccctcaattttttttctcctctggcAGCGTGCGGTTGTGTTTGACAGAGTTTATAAATATAGGGAGAACGGCAGACAAAACAAAGtttcaaactttatttctaccAAAAACATCGTCTCCCTGTCATCAAGTGACAGTCCTTAGTAAATTTCTCACATAATGCTGGATGGAAAGCACAGCCAATGCTGCATCATTATACAGTAGCTCAGGCAGCCAGGAAATACCAACCATTTAGAAAATCTGGTCCTCTCTCATGAAGTATAAaagggaaaataaaacaaaagtcaaaCATGAGAGCTACAATTCTAACAAATGTATGGTTGCGTATCCTATTTAAGAGCTAAAATGGACACATTTAAAATGGTGAAATGGCTTGAAAATACAGAGAACAAGCCAAAAAGTCGAGCGAAAATTCGGGAGATTCAACATGTTTGAGCCACCAGTCTTGCTGTGAGACAGTCCTGACTATTTGGTAACAGTTGTAGTTGATCAGATATGGATCTGGTTTACAGCTGTAAACCAGTGACACCGTCCAAGTCCCAGAACTGTTTGCTCCCGACAGCCAGGTATCCTGCAGTTTTGGGCTCAGAATTTGAGGCTAAATCCTGGACCGACTGCCGACACTCCCTGGTTGCTGGTTGTCAGGTGGAAGCCTGTGTCTTTGAGGTCGTCATCGCCCAGGTGACTGTAGCCCAGGCCTCCCTCGGGTGGACGAGGACTGGTGCCTCTCTTCACCCTCTGTTGCTCGCTCTTGGCCGGCCAGGTGGGGAACATGGACGGCTCGATAGGCAACGGCGTCTCGCGAAAGTACTCGTGCTTGAGCCCCTCGTCCGATAATATCCTCTTACTGGGGCAGTAGGTGAGGAATCTGGAAAACAGTCAATGATCGAGTTCATATGGTCAGCTACGTTTCAATGAAGAAGCACAGGTAACCAGGTAGCTTAAATTGTCGTGTGGACCTTTATTCTTTATACACAGACGTCTGTGTTTAAAAATTTGTAAAATTTTTAGGTAAAAAGGTTATCTGCTTCCAGTCCCCTTTATTACCGATCAAGACATATCTGGCATTTCTGTGCCAGTGCCAGAAAAATAGTGAcatggcaac

Function

NR:

description
PREDICTED: cyclin-dependent kinase 11B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU72298 True 1392 TUCP 0.47 4 29752446 29758010
TU72299 False 1240 TUCP 0.44 2 29752446 29754247

Neighbor

gene id symbol gene type direction distance location
mmp23ba mmp23b coding upstream 854 29741558 ~ 29751592 (+)
arhgef19 arhgef19 coding upstream 159394 29572007 ~ 29593052 (+)
ddost ddost,LOC102799190 coding upstream 228994 29517679 ~ 29523452 (+)
zbtb17 zbtb17 coding upstream 235256 29502226 ~ 29517190 (+)
hspb7 hspb7 coding upstream 251985 29496591 ~ 29500461 (+)
LOC120559844 atad3a,LOC103366266,LOC102783555 coding downstream 54153 29812163 ~ 29821637 (+)
otud3 otud3 coding downstream 82194 29840204 ~ 29846246 (+)
trim33 trim33 coding downstream 95960 29853970 ~ 29891523 (+)
slc66a1 pqlc2 coding downstream 135995 29894005 ~ 29902494 (+)
nr1h5 LOC100699579,LOC102785665,LOC102209452,LOC102302160,LOC101474965 coding downstream 145849 29903859 ~ 29927978 (+)
G54101 ubiad1 non-coding upstream 13202 29737041 ~ 29739244 (+)
G54094 LOC104942893 non-coding upstream 45379 29703248 ~ 29707067 (+)
G54057 NA non-coding upstream 182828 29568175 ~ 29569618 (+)
G53963 NA non-coding upstream 343333 29408711 ~ 29409113 (+)
G53962 NA non-coding upstream 368255 29383950 ~ 29384191 (+)
G54107 LOC102235830,LOC104955916,LOC108233146 non-coding downstream 1034 29759044 ~ 29760415 (+)
G54108 NA non-coding downstream 3066 29761076 ~ 29765810 (+)
LOC120558370 NA non-coding downstream 234117 29992127 ~ 29994409 (+)
G54221 NA non-coding downstream 336042 30094052 ~ 30103983 (+)
G54229 NA non-coding downstream 372057 30130067 ~ 30131917 (+)
ano11 ano7l1,LOC102309663,LOC103367289,LOC103384790 other upstream 184673 29548744 ~ 29567773 (+)
plekhm2 plekhm2 other upstream 206560 29524023 ~ 29545886 (+)
nadka nadk other upstream 429204 29296604 ~ 29323242 (+)
LOC120558754 NA other upstream 1336699 28407271 ~ 28415747 (+)
G53775 NA other upstream 1406530 28341922 ~ 28345916 (+)
szrd1 LOC103366254,LOC108233026,LOC106518923,LOC101072016,LOC107390353 other downstream 11842 29769852 ~ 29782937 (+)
agrn agrn other downstream 456600 30214610 ~ 30486565 (+)
micos10 minos1 other downstream 881750 30639760 ~ 30642621 (+)
G54383 NA other downstream 931642 30689652 ~ 30690404 (+)
LOC120559580 LOC101486775 other downstream 1040183 30798193 ~ 30837415 (+)

Expression


Co-expression Network