fam43b (fam43b)


Basic Information

Item Value
gene id fam43b
gene name fam43b
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 9996288 ~ 9999314 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799236.1
gaggaggaggagaggaaggaggagcgagcgagcgagcgagTGGGGGAACAGACTGGCTGAAGCTCGCAGCTCTCAGTCTCTCTTCAGTGCTTTGTGAAGCAGCTTCTTTTTGCTTTCCCTCTCGCACGCACCTGCCCCTCCTACTCTTTTGCCTGAGCTGACAAGAGCAAACGCGGCGGCAAAAAAAGGGGCTCACTCGCTCCAACTCTCCCCGTGCCATGCTGCCCTGGAGAAGGAATAAGTTTGTTCTGGTGGAAGATGAGGCCAAGAGTAAACCCAAGAGCCTGGGGACGGGGCTGACCTACCActccatcctctcctctcttctgcgCTCCTGTCCGGACTTGCTGCCTGACTGCCCCTTCGACTGGGTGGGCAACATCTTCCATACCAAACGGCAAAAGGTGGAGCTGAACAAAGAGGAGCCTGTTTACAACGTGCGCTACCTGGGGAGTGTGGTCACCATCACAGCAAAGGGAGACGGCTGCACCCAGGAGGCAGTGGCCAAGATCTGGGTGAGGAGCAACTACGGGGAGCAGAGTGTCAAGATGAGGTTATCAGTGGGGCCGCAGGGCATCAGGATGAGTGCTGACAAATCTGGGAAAAAGAAACCCATCCATCTTTACTCACTGAACAGAATCACCTACTGCGGCGCTGACCCGTGCCGGCCCAAGATCCTGGCTTGGATCTACAGGCACCAGGTCAAGAACATGGCCGTGGTGCTCCGGTGCCACGCCGTCCTGGTTAGCAAGTCGGAGAAGGCCCAGGCCATAGGCCACAGCCTCTACCAGAATGCCACCTCCGCCTTCAGCGAGTTCAAGCGGCTGAAGCGTCAGAGCGATTTCCGGCACtgccagcagcagctgctgggGGAGGAAGCGGTGCCCCTGATGCCTCTGAGGAGGCTGCTGAACGGGCAGTGCCACTACAGACCGCCGGCCAACAACCCCGGCAGCGCCACCCGCCTCTGCTCcatcacagaggaagaagaagaggaggaagaggaggacatGGAAGATGAGAGGCAAGAGATGGAGGAACCAGATGAGCAGCAGGAGAAGCAGGTTTTTACAACAAAAACAGACCCGACTCAGTTATTATCAGAGCTGGACATTGGGGATATTGCCAGACTGGAGCAGTGCCAAATCAACTTTGTCAgtgacagcaacaacaacacgtTTACATTTATAACCTCTCTGGTGTGACAATAATGCAATTTAAAGAATTCTGCAACACTACAGTGACACATTCGTCTCTTGGCCCTTCTCTGGTACCCCACTCAGGCTCCTTCCTTCCCCGTTCCATGAAATGTGAAGGGTTTACTAGAAACTTCTCCTACTCCCGGGTGGTGGAGAAAAGGCAGAGGATCGTTCTGTGGGAGCAATTTCTATGCTGGCCAGATGGCTCAGATGCTGGTTTTGACGATAGCAGTTTGGGAAACTGCGTGTTTACAAAGAGGGCTGGGGATGCACAGACTAACTATAGCACAATGACGAATGAGGACAATggtttcagaaaaaaaaggagagatcaCTGGGTCACATATTGATCACAGCACCAAGCAGGATGTGTTTATTAGTCCTCTATCTTCTTATATTTGTGAGTATAATTTATGCCGTGTTTGCCAGCGGGAACATATTTCGGATCGATTTGTAATATATTTTTCAGGGAGGTTCTTTGTAAATTTGTGTGATTTTTCTAATATGACAATCCTCACTGAAATTGTTCACAGACTGACCTTTTCCCAATGCTTACAATCGCGAGAAGTTATCAAGGTTTTACTAATGACCACGGCCGACTAATGAATAAGGCTGTCATTTAGGAAGCAAGCCATTGAGTCGACATGTTTATTGCTGTCATCTGTTACGGTTCTTATCATTTATGCATGACATGTCAGCAGTAACCTTTTCGTGCGGAGCTTCTGTCTTTTTTCATGTGACATCTTTGATCCTCGGGGCTTTCAAAATGAGCACTGTGATAAATGTGTTGCTGGGGATAAAATATACAACTGTTCACGTAGCAATGTCTAACTATGACCTGAAGCTaagcttttttttcacatacctaTTGCTTTGTCACCTGGTTTgccaacacaacagcaaaaatttatttaaatttgccTTCGCTTTTTAGCCAAGTTTTGCTAATACAGTTTTTCCACATGAGCCCTTACAAATGCAGATGGACCCTTACAATTTAACACAAACTGTTTTGAATATGACTTTGGCTAATTTCCTGTTGATAATTTATGTCCTACTGTCAAAGATGCATTGTGATTATTATGAGATGAAGCTATCTATTTTCCAAATATGATGAATAAAAATTACCCTTACTTGGGTTTACTTCTTGAATCACGGAGGGAGGGTATTTCTAGATGTTTTCAGAGATTATTTAAATGAATCCAACAATTTTTGCATTCCACTACCGTGCATTTGCATATTTCTGATGTGAAAATATGCCTGACCTACACttcaaaaagggaaaaaaacatatttacaccAGCATAATCTGCTTCCTGAGCTATACAACTGTAtgaaaaagatgtttttttgtcacaagAAAAGACATAACTTTATACTGCCAGTCAGTCCAATTAGATGTTAATGTGGTTTGATACATTTCTGCAGGCCTTGTACTGGCTTCTCAGCCTTTTTTTACTCTGAGGGGAGCAATTAATCAGCAGATTGAATTGTCCAGGAAATGAACATAAAGCACCTGCCTCGGCAGGACAGCTGTCAGGCTCTGACAGAAGCGAGTGATCCAAAACGGGGACCGGGAAGTTGACTCACCCCATCAACCACTTTACTGCAAACATCAGCCATTTCAGTGACGTCTTTAAAATCTTTTACTGGAATCGCACAAACACCAGCAAGTGACGACAATGAACCAGTGCCTGGTGTTTCACAATCATCAGCATCTCTGTCTTTGAACAACTCTGAATTAATATATTCCATATTATATCACCACCAATATAATCTTGCAGGGCAATAAATATATTGATGATCTGTGGAATTATTGAAGCCCAAA

Function

symbol description
fam43b Acts upstream of or within vasculature development. Is expressed in forebrain; somite border; and vasculature. Orthologous to human FAM43B (family with sequence similarity 43 member B).

NR:

description
protein FAM43B-like

GO:

id name namespace
GO:0001944 vasculature development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799236.1 True 3027 mRNA 0.46 1 9996288 9999314

Neighbor

gene id symbol gene type direction distance location
vwa5b1 vwa5b1 coding upstream 26365 9936549 ~ 9969923 (+)
LOC120559339 cptp coding upstream 77656 9916527 ~ 9918632 (+)
LOC120559338 NA coding upstream 91845 9901990 ~ 9904443 (+)
sdf4 sdf4 coding upstream 234364 9754069 ~ 9761924 (+)
syt6a syt6,LOC103150978,LOC106928401,LOC103467834 coding upstream 306958 9597626 ~ 9689330 (+)
LOC120558778 NA coding downstream 24026 10023340 ~ 10116835 (+)
pink1 pink1 coding downstream 119371 10118685 ~ 10131254 (+)
hspg2 hspg2 coding downstream 163688 10163002 ~ 10288140 (+)
tmem269 LOC103365731,LOC102791044,LOC104928629,LOC100689985,LOC100710458,LOC108237576,LOC101473555 coding downstream 304081 10303395 ~ 10316636 (+)
magi3a magi3 coding downstream 327434 10326748 ~ 10526334 (+)
G48481 NA non-coding upstream 75480 9920048 ~ 9920808 (+)
G48415 LOC103359731 non-coding upstream 191942 9803739 ~ 9804346 (+)
G48400 NA non-coding upstream 229893 9764056 ~ 9766395 (+)
G48399 NA non-coding upstream 243743 9752026 ~ 9752545 (+)
G48398 NA non-coding upstream 244640 9751330 ~ 9751648 (+)
G48507 NA non-coding downstream 11522 10010836 ~ 10014383 (+)
G48594 NA non-coding downstream 404738 10404052 ~ 10404759 (+)
G48602 NA non-coding downstream 512508 10511822 ~ 10542926 (+)
LOC120559193 NA non-coding downstream 544695 10544009 ~ 10560240 (+)
G48639 NA non-coding downstream 586845 10586159 ~ 10586543 (+)
ubxn10 NA other upstream 71207 9922600 ~ 9925081 (+)
G48347 NA other upstream 566341 9404224 ~ 9429947 (+)
LOC120559255 tshz2 other upstream 874376 8990487 ~ 9121912 (+)
G48162 NA other upstream 1269736 8716767 ~ 8726552 (+)
G48077 NA other upstream 1308324 8680282 ~ 8687964 (+)
agmat agmat,LOC102790280 other downstream 140284 10139598 ~ 10151251 (+)
G48640 NA other downstream 614717 10614031 ~ 10750428 (+)
G48752 NA other downstream 1173281 11172595 ~ 11173654 (+)
G48765 NA other downstream 1315348 11314662 ~ 11315992 (+)
xkr5l xkr7,LOC103354446,LOC100690518 other downstream 2085138 12084452 ~ 12090773 (+)

Expression


Co-expression Network