zgc:194282 (srms,LOC103385165)


Basic Information

Item Value
gene id zgc:194282
gene name srms,LOC103385165
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 782791 ~ 821180 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799261.1
ctGACGTACGCAGTACGCAGGTGTGTGAGCAGCAGGAGGTGTGTGCGGAGCGCCAAACTGAAACTTTTTACGCACCGTGCCGCCGCTTCAcattcacatctttctctcttcctctcgtGCGCAACAAGTGCTGCGGCCGTTTTCCCGTTTGCACCAGATTACAATGGATTAATATTTCCTCGAGAGCCATGCTCACGGTCTTGGTTGGTCTTGGCTCGCGCCGCCGAGTCCTCGCAGGGAACCGATCCGACTTGGATGCCCTCCATTCCCGTTTCCTTTCCGCATTCCCGCAGCCGCCGTGCGCAATGCAGGCGTGGAGCTCAGATCCGTGatctcaacagaaaaaaacCGGTTCCTCCGGCTAATCTAGCCAACTATTGTTGGCGGTGCATTATGTTTCCAgccagaggaagagaggaagccCGGAGGACTGAACGGCTATTCGCTGTAGGCGCTAAAAGGCCGTTTTCAACGCACTGAAAGCCTGAAACCGCGTTTTATTGATCGGTGTTACGGTAAAACCTGGAACAACCCCCCCGCCGCCGCGCTCCTTCATGTCCCGGGATGGAGGGCTGCTGTCGCGCCTGTATGCCGTGTTTGAGCGGGCTCTGGAACTGCCTATGGCCGGACTCCCGCGACCCGGACGtccccaacaacaaccatgtCATTGCCAACCCAGCCGCGGAGACGGCGGAGATCCGCACCGTGTCCGGGGACATCCGCGTCCCGTCGCCCAAGAAGCGGCCGGTGCAGCTTTACGCGGCGCTCTTTGACTTCGAGGCCCGCAGCGACGACGAGCTGACGGTGAAGGAGGGGGACAAGCTGTCGGTGATCGAGAAGCGGGGGGAGTACGTGCTGGCCAAGAAGCTGACGGGGTCTCTGGAGTCCGGACTGATCCCGGCCAACTACGTGGCTCTGCTGCAGGACGAGTTCGCCAAACACAAGTGGTACTATGGGAATATAAACCGTGTGAAAGCTGAGAAGCTGCTGCTAGCTTCCCAAAACAAAGATGGCTCCTTCCTAGTTCGCATCAGTGAGAGTCACAGTGACGAGTACACAATCTCTGCCCGAAATGAGGGGAATGTGTACCACTTCAGGATCCAGCGCTCCACCATCGGGGCCTACTTCGTCTCAGATAAGATCTCCTTCTCTACGCTGGGAGAGCTGATCTCCTACTACCAGAAATACCCTCGCAGCCTAGGGGTGCTGCTGGAAGAGCCCTGCACCCAGCAGCGGGAGCTGTTCGACATGGAGCCGTGGGAGAGACCTCGAGAGGAGTTCAGACTCCACAACAAACTGGGAGAGGGACACTTTGGAGAGGTGTGGGAGGCCATGTGGACCACAGAGAACAGGAAAGTGGCCATAAAGACGCTGAAACGAGAGGACACGAAGCAGGACGAGTTTGTGAAGGAGGTTCAGGCGTTGAAGAGCCTCCATCACCCGAAGCTGATCCAGCTGCTGGCCATGTGCTCCAGGGGAGAGCCGGTCTACATCGTGACCGAACTCATGAGCAAAGGAAGCCTCAAGTCTTACCTCGCCTctgcTGAAGGCCAGGTGCTGACATCAGCTCATCTGATCTACATGGGCAGTCAGATCGCCGAGGGCATGGCCTACCTGGAGGACCGAAACATCGTCCACAGGGACCTGGCTGCCAGGAACATCCTGGTGGGAGAAGATCTCATCTGCAAGGTGGCCGACTTCGGACTGGCTCGGATTATAAGGGACAGTGTGTATACAGCCAGTCGAAACACAAAGATCCCGGTGAGGTGGACAGCTCCCGAAGCAGCAATTTACCAGCGCTTCTCTGTAAAATCAGATGTCTGGTCGTTTGGGGTCCTGCTGTATGAGATGATGTCACGGGGCAAGATGCCTTATGATGGAAAAAGCAACAAGGAAGTGTTGGATCTGCTGTCATCGGGGTTTCGGCTGCCCTGTCCAACGCGCTGTCCTCCGAATATTTACCGCATCATGATGGACTGCTGGGCTGCTGAGCCCTCCAAGAGACCCTCCTTCCACGCCCTACACAGCCAATTGGATTCAATATATGCCAGGATCTATTTTAAGACTATAGAAGTATAGAAAGAAGGAGATATGGATGAAGAAGAGGACAGTGAGAGCCAATTGTGATAACTGGTCACCGACAGCAGCATGGACTGCAAATATGAAAGGGATAGGTAGGGAAGGAATATTCTCCTCCCGCATGAAATCCACTTCCACAACAGGGTATATGTACTTTAAAAAACACCAAGGTGTGACAGGACAAAGAGAGGAGAGCAGCAGACCGAACAAACACGGGTGAAATGTTCAAGACGGAGAAGATGCTCACCAAGTCAAAGAGGAAATATAAGGAATACTTCATTTCTTAAGCTAAAAGAAAGCAAGATGGACAGATACAATTTGTCTAAAAAAATAGTCTAAGAAAGGTGTGTAAATACACTCctacataaaaaaacactgaacaatAAAACCCTCTGCACATTCACAGAAccaactgtttttatttttatacccttttgtgttttataaataatattttattaCTGCGCCATGTCTGAATATATGCACACTTTGAAATGTTATAATATCCTATGTCAATTGTCTGTCTTTTGACTGTGCTAAAATCGAGGTTATGTGCAATAATGAAGTGCTTGCTGAGTTttcagccatgctagcggcacAGTGCTCCAGATGCTGATGTGGCTCGCTCTGTTGCTTCACCACTTTGGGTTAcattgaaatatctcaacacagGTTGAACTGATTGTCATGATATTTAGTACAGACCATCACACTCCACAAAGGACGACTCTGGTGATCACATCACTTTTCATATAGCGCCACCATCAAGCCTTCTATCTTGTTATGAACTAATGAACAAACTATTATCAGATTCAGCTGATGATTAAATGATAGGATAATTTAAAGGTATCACTGAATGAATGCAGAGACCAATAACTCTTTCATTCAACATGTGGCATGCAAGTATCCAAATCTATCActcaaaggaatagtttgacattttggaatatGTGCTTCTGGTGGTTTTGTGCATTCTCGTAACAGTGTGGAAGTGTTATTGCTTTtacataaataatttatttgaacAAGTTCTGAAAAAATCTATCTACTCCTAGCTCTTGATGTAGATGCTGCGATGGttgacagtgtttcctttagaattgttttctgcagcgggggtgggggtgttgaaCGTCAAAAAAAGTAACATTACCTTAAAACAGCGTACGTAGATTCTTCttagcatctcacatcacactttgagtcactatgaccactactgctacggtcagaaacattgactgtgccaaaatatgaacaataacgtcgCTGTCAACGGGcatatctgctaatgttagctaccgaccGTTGGCttaaaaccatccagcaaatagacggtgccGTTACTTGAAACAGGTGATTAACGTCCAGTTACAACTAGAGTGCCTATGTTTACACCACAGACGGTCCACAGACTACTTCAAACCATGGACTGTAAAGAactacaaaaattaaaaaatgaaggCAAGAAGGCtctttgggggtgggggggtgttaaACAATGTTGCAATGCAATGCAATTTTGAGAACAATGCAACTTTTGTCTATTATGCATGAGAATATACAGCAGACAAAGCCAAGTTCAGGAAACTTTAGCCATAATCACCAAATCACGAGATTGAGGTGTATGTGTTAGGCTGAGTACCATCATGTACCAAACACCAGTAGTGCAaagaataaaatattttaagtaT

Function

symbol description
srms Enables protein tyrosine kinase activity. Involved in peptidyl-tyrosine autophosphorylation. Located in cytoplasm.

NR:

description
PREDICTED: tyrosine-protein kinase SRK3

GO: NA

KEGG:

id description
K08895 SRMS; tyrosine-protein kinase Srms

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799261.1 True 3773 mRNA 0.48 8 782791 821180

Neighbor

gene id symbol gene type direction distance location
LOC120558328 nol4l,LOC103385166,LOC103361530 coding upstream 11735 558217 ~ 771056 (+)
commd7 commd7,LOC102794680 coding upstream 296896 476464 ~ 485895 (+)
vps13d vps13d coding upstream 573054 74750 ~ 209737 (+)
LOC120558443 LOC104919493 coding upstream 716736 63849 ~ 66055 (+)
ptk6b NA coding downstream 4075 825255 ~ 847622 (+)
LOC120558777 LOC102225534,LOC103148188,LOC103148186,LOC103356007,LOC103385155 coding downstream 117796 938976 ~ 986271 (+)
trim101 NA coding downstream 162989 984169 ~ 1010837 (+)
LOC120558589 LOC103356004 coding downstream 194208 1015388 ~ 1045239 (+)
adrm1 NA coding downstream 227792 1048972 ~ 1053010 (+)
G46042 NA non-coding upstream 281232 501349 ~ 501559 (+)
LOC120559841 NA non-coding upstream 406318 375096 ~ 376473 (+)
G46014 mapre1 non-coding upstream 417524 358822 ~ 365267 (+)
G46013 mapre1 non-coding upstream 442113 332243 ~ 340678 (+)
G46011 NA non-coding upstream 452383 323243 ~ 330408 (+)
G46078 NA non-coding downstream 41011 862191 ~ 871239 (+)
G46132 NA non-coding downstream 81259 902439 ~ 902678 (+)
G46133 NA non-coding downstream 81636 902816 ~ 903470 (+)
G46134 LOC104947167 non-coding downstream 82378 903558 ~ 907128 (+)
G46154 NA non-coding downstream 96912 918092 ~ 918334 (+)
LOC120559832 rps21 other downstream 415135 1236315 ~ 1247771 (+)
G46238 NA other downstream 456108 1277288 ~ 1284379 (+)
G46305 NA other downstream 701505 1522685 ~ 1523231 (+)
G46328 NA other downstream 814768 1635948 ~ 1638170 (+)
LOC120559409 NA other downstream 1384161 2205341 ~ 2232659 (+)

Expression


Co-expression Network