mad2l2 (mad2l2)


Basic Information

Item Value
gene id mad2l2
gene name mad2l2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 29360998 ~ 29364410 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799349.1
TCAATGTAATGCGCTACCAAGCTTTGAATAGGTTTGGGAGGAAAAGCCGCGTTTCGTGCATTTCGGGTCGTGAAATTGATTATATCCTAAGTTAGTTTTAAACTATGCATATGCATCTTTGTAAAAACTGACATTTTACTCCTCCCCTTCCATTGGTGGTCATTGTCAAGCCAGACAGCGACAAAGGAATTATAGCCTCAATATAATGACGAACGCTTGACAGCCTGCTGCTTTGCCAACGTTAGCTAGCGAGACAATTAGCTATTCGTTTCATTTGACAGTTTTGGAATAGAAAATATGACAACTCTAACAAGGCAAGACCTCAATTTTGGACAAGTGGTTGCGGACATCCTGTGTGAGTTCCTGGAGGTCGCTATTCATCTCATCCTGTATGTCCGTGAAGTTTATCCCTCGGGAATATTTcagaagagaaagaaatacAATGTACCTGTGCAGatgTCATGTCATCCAGAGCTGAATCAATATATCCAAGATACACTTCATTGTGTAAAGCCACTCATTGAGAAGAATGATGCAGAGAAGGTGGTGGTGGTCATCATGGACAAAGAGCATCATCCAGTAGAGAGATTTGTGTTTGAGATGTCCCAACCTCCTCTGctctccatcagCTCAGACACATTACTGTCACATGTGGAGCAGCTGCTGAGGGCATTCATACTGAAGATcagtgtgtgtgatgctgttttAAATAATAACCCACCAGGgtgttcatttacagtactgGTACATACCAGAGATGCTGCGACACGCAACATGGAGAAGGTTCAAGTCATCAAGGATTTTCCTTGGATAGTTGCTGATGAGCAGGAGGTCCACATGCAGGAGCCTAGACTCATCCCACTGAAGACCATGACATCTGATATAGTAAAAATGCAGCTCTATGTGGAAGAGAGGGCCCAGAAAACGTAGTCCTGTGACGATGTTGAGTCATGAGCAAAGTATATAACACGGCCCATCAGAGCTGGAACAGTCAAAAAGAAACATGAGTTTTTGTTGAACACATGGGATCATCAAGAAAGAGATGTGGAGTGTGTTCAGGAGGTGTGAACATTCTGCAGCTAGCGTTGGTGTGTATGGTGTCTACacgtacgtttacatgcacaccactattccactattattcagaatatgacaatataccGAATTTGATACATGTCATGTATACAGCATATTgcggttggatattccgaataaggcctttttccgaatatagcattttccgattaagacgtgggatattccagtattattcaggttttagaggcattctttggacatgtatacagcgcatttggA

Function

symbol description
mad2l2 Predicted to be involved in DNA damage response, signal transduction resulting in transcription; positive regulation of transcription, DNA-templated; and regulation of protein metabolic process. Predicted to act upstream of or within cell division and cellular response to DNA damage stimulus. Predicted to be located in nucleus and spindle. Predicted to be part of zeta DNA polymerase complex. Human ortholog(s) of this gene implicated in Fanconi anemia complementation group V. Orthologous to human MAD2L2 (mitotic arrest deficient 2 like 2).

NR:

description
PREDICTED: mitotic spindle assembly checkpoint protein MAD2B

GO: NA

KEGG:

id description
K13728 MAD2L2; mitotic spindle assembly checkpoint protein MAD2B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799349.1 True 1317 mRNA 0.42 8 29360998 29364410

Neighbor

gene id symbol gene type direction distance location
LOC120559728 slc35e2b coding upstream 12961 29339706 ~ 29348037 (+)
gnb1a gnb1,ol-gb1,gnb1a,LOC107385217,LOC103044197 coding upstream 66840 29250974 ~ 29294158 (+)
cfap74 cfap74 coding upstream 115430 29183326 ~ 29245568 (+)
nphp4 nphp4 coding upstream 663089 28512047 ~ 28697909 (+)
c5h1orf174 NA coding upstream 852458 28504486 ~ 28508540 (+)
tmem82 tmem82,LOC104921441 coding downstream 4045 29368455 ~ 29372181 (+)
spen spen coding downstream 10564 29374974 ~ 29401377 (+)
epha2b LOC104966854 coding downstream 61066 29425476 ~ 29448947 (+)
fam131c fam131c coding downstream 96228 29460638 ~ 29473304 (+)
hspb7 hspb7 coding downstream 132181 29496591 ~ 29500461 (+)
G53948 NA non-coding upstream 11889 29348534 ~ 29349109 (+)
G53897 NA non-coding upstream 254276 29105794 ~ 29106722 (+)
G53885 NA non-coding upstream 390653 28964636 ~ 28970345 (+)
G53884 NA non-coding upstream 405182 28955560 ~ 28955816 (+)
G53782 LOC103356136,LOC104946517,LOC101486029 non-coding upstream 858085 28500587 ~ 28502913 (+)
G53956 NA non-coding downstream 8399 29372809 ~ 29373489 (+)
G53960 NA non-coding downstream 18342 29382752 ~ 29383131 (+)
G53962 NA non-coding downstream 19540 29383950 ~ 29384191 (+)
G53963 NA non-coding downstream 44301 29408711 ~ 29409113 (+)
G54057 NA non-coding downstream 203765 29568175 ~ 29569618 (+)
nadka nadk other upstream 37756 29296604 ~ 29323242 (+)
LOC120558754 NA other upstream 945251 28407271 ~ 28415747 (+)
G53775 NA other upstream 1015082 28341922 ~ 28345916 (+)
casp9 LOC104954971 other upstream 1038219 28319637 ~ 28322779 (+)
bsna bsn,LOC102782891,LOC106513106 other upstream 1217197 27954399 ~ 28143801 (+)
plekhm2 plekhm2 other downstream 159613 29524023 ~ 29545886 (+)
ano11 ano7l1,LOC102309663,LOC103367289,LOC103384790 other downstream 184334 29548744 ~ 29567773 (+)
G54103 LOC103366252 other downstream 388036 29752446 ~ 29758010 (+)
szrd1 LOC103366254,LOC108233026,LOC106518923,LOC101072016,LOC107390353 other downstream 405442 29769852 ~ 29782937 (+)
agrn agrn other downstream 850200 30214610 ~ 30486565 (+)

Expression


Co-expression Network