LOC120558400



Basic Information


Item Value
gene id LOC120558400
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 3958556 ~ 3982281 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XM_039799378.1
ATGAGCCAAGACACTACAGAGACACGAACACGAACCCGCAAGGGCAACCGGgTGTCGTCGGAACTTACGGGACAGGAGATGAAGCAGGAGTTAAGCAGCTGTCCCACGCCCGGATGTGATGGCAAAGGCCACGTCAGTGGAAGATACTCGCGGCACAGAAGCATACTGGGATGCCCGATTGTGAAGAAAAGgaagctggaggaggctgaggcTGAGGCTGAGGCTGAGGAGAACCACTCTGCTCCCAAGAGGAGGAACCAGCCCGCCATGGCTGGAGCGGAGGAAGGCTTCACAGCAGACAGCGACGccgcagaggaggaggaggaagaggaggaggaggaggaggtggcgcagaaagaagaggaagaggaggaggaagaagtagacctcaaagagaagaagaacaacaacacaaagagCAGACCGGAGTCGACAAAAACAGACTGCTCCCTGGTGACGACAGaggacacacaaacagcagTTTGTCCTCCGGCTGAGGTTGGAGACAACCAAAGCCTCACCTCCGAGATTGAGAACCAAACGGAGCAGGACAACACTAGTGAGGAAGTCAGCCATGTTCCTCAGccggaggaaaggaaggagcaggaggaggaaggtCAGCTGCCGTCAAAGGACCAGTCCTCAGAGCAACCTGAAGGAGAACTTACTGAGCCTGAAGAGACAaaagaagagaaggaagaggaagcAGAAGAAGTAAAGGAAGAGCAGCAGGAGAGGCTAAAGAATATCGTAGAAGAGAAGGTGATAAAAAGACATGTGATGAGCCAGGAAAACTGTGATCACCAATACTCCAGCGGAGATTACAACCATCAGGCCAAAGAATCCACAGAGGAGCAGAGgaagagggatgaagaggaggaggaggaggaggaggaggagggacaggaggagcaagagcaggaggaggaggaggaagaggaggaggaggaagaggaggagggagaggtcCACCAAGAGCTTGACACTCCTTACACTTTGAGTCCACACGCTGAGGGCTGTGAGGCGGAGCTGTCACTCAGGGAAGAGAAGCTCAGCAGCCCAATgactgaggaagaggaggaggacgaagaggagagagaggaagaggaggaggagaggcaggGGAAGGAAGTAGGcgaggtggtggaggaggaagaggaggaagaggaggaccgAGACTCCAGCAAAGCCTCGCCGACTACAGTGGTTATAGAGGTCCGCtctgaggaggatgaagaggaagaggaggaggaagaggaagaagaggaggaggaagaggaggaggaggaggatgatgaggaggaaggagaggagcaGGACCATGTCTCAGAGGGCTCAGGAATCACCGACGACTCAGAGAACTGGGATATGACGCGGGGGAACCTGGGGCTGCTGGAGCAGGCCATCGCCCTGAAGGCCGAGCAGGTGAGGGGGGGCCAGGAGGCGCGCAGCTCCCCGGACTACCAGCCGGACTACCAGCCGGACTACCAGCACGACTACCAGCCCGACTACCAGCCGTACAGCAGTGGCTCCAGCAAGAGCTGCGAGGCTGCTGCTATGAGCCGCCGCACGCCGCACTACAGCAAAGAGAAGAAGGAGGTGAAGTGTCCAACCCCAGGGTGTGATGGGACAGGCCATGTTACCGGGCTGTACCCTCACCACCGCAGTCTCTCTGGATGTCCTCACAAAGACAGAATCCCTCCAGAGAtCCTGGCCATGCATGAGAACGTCCTGAAGTGTCCCACTCCTGGCTGCACAGGCCAGGGCCATGTCAACAGTAACCGCAACACACACCGCAGTCTGTCCGGCTGCCCCATCGCAGCAGCCACTAAGCTGAACAAGAGCCAGGACAAGCAGGTTCATTTACAGGCCTCAGCCAGCGAACCCTCTTCCAACTCGGACAGAGTGCTCAGGCCCAtgtgttttgtgaaacagcTGGAGATCCCTCAGTACGGCAGCTACGGGCCCAACGCAGTGACCACCACGCCTCGAGCTAACCTGGCCAAGGAGCTGGAGAAATACTCCAAGGTGTCTTTTGACTATGCAAGCTTTGATGTCCAGGTGTTTGGAAAGCGTATGCTCATTCCAAAGACGCCCGGCAGCACTGAAACATCACCCAAAGCCTTCAAATCTAAAACATTCCCTAAGGCCTCCTCCCCCAGCCACAGTGTGTCGGGAGGCTTTTCTAAGAGCGCCTCATCCTCCAGCAGTTATGACTATAGCCAAGACGCAGAGGCAGCCCACATGGCAGCAACAGCCATCCTCAACCTGTCCACGCGCTGCTGGGAGAGACCAGACACCATCAGCACCAAGCCCAGGGAGCCCTGCACCAAGGAGTCGGACATTGAAGTGGATGAGAACGGCACCTTGGACCTCAGCATGAAGAAGACCAAGAGGGAGGGTGTGCAGCCTCCAGAGCCTTCATCCTCCTCATCTTCATCCTCTCAACACATGGGAGCCCCCTTGTCTCAGGGCCACACTCCGCCAGAGTGGGAGGGGCCACTGGACTTCACCAAACCAAGTGAAGTCAAAGAGGAAGACCACGCAGAGGTGGAATATACGGCTCCCTCATACACCTCATCTGATGGTGAGGAAGAGGACCAGGAGAACCTGGAGGACAGGAAATACCCCGGTGAAGTCACCACCGGCAGCTTCAAGCTCAAGTTTCAGCCCAAAGACAGCAAAAAAGATATTCTTGCATGTCCCACCCCAGGTTGTGACGGCAGTGGACACATCACCGGCAACTATGCATCCCATCGAAGtctgtcaggctgtccTCTTGCTGATAAATCACTTCGGACCCTCATGGCTGCCCACACAGCTGAACTAAAgtgtCCCACTCCAGGTTGTGACGGATCAGGCCACATCACAGGAAACTACGCCTCACATAGAAGTCTGTCCGGATGCCCTCGAGCCAAGAAGAGCGGGGTCAAATCCACCCCCACCAAGGACGACAAGGAAGACTCTGAGCTGTTGAGGTGTCCAGTTCCTGGCTGTGACAGCCTGGGCCACATCAGTGGGAAGTACGCCACGCACCGCAGTGCCTACGGCTGTCCGCTGGCTGCCCGGCGGCAGAAGGAAGGTCTCCTTAACGGCACTCCCTTCTCCTGGAAGGCCTTCAAGAACGAGGGCCCAACGTGCCCCACGCCGGGCTGCGATGGCTCGGGCCACGCTAACGGCAGCTTCCTGACGCACCGCAGCCTGTCAGGTTGCCCCAGAGCGTCGGCCAACAAGAAGAGAGCCAAATTCCCCGGAGACGAGTATATAACTGCCAAGTTCCGAGCCAGCGATGTTCTGGACAACGACGAGGACATCAAGCAGCTCAACCAGGAGATCAACGAGCTGAGCGAGTCCAACTCCGAGATGGAGGCCGACGTGATGAACCTGCACACTCAGATCTCTTCAATGGAGAAGAACCTGCAgagcatggaggaggagaacCAACATATCGAGGAGAGGAATGAGGCGTTGTTCCTGGAGCTGTCGGGCCTGAGTCAGGCCCTGATCCGCAGCCTGGCCAACATCCGCCTGCCCGCCATGCAGGAGCCGCTGTCAGAGCAGAACTTGGACAGCTACGTGGAAACCCTGACCCACATGTTCACCAATAAAGACTGCACCCAGAACCCGGAGAACCGGGCTCTGCTGGAGTCCATCAACCAGGCGGTGAAGGGCATCGAGGTGTGACAGACACAAGGGAGGAACACAGGGCGTCACCGGGGACTACATCAATCTTTTCTTTCCGAAAACCCTttagatactgtatgtaattaATTCTTCTCATTTAGAACTCTTGTCATCCGTTCTATGCATTAGTTTGCTGTTTGCATGTATCTTTACGATTGGTAACGAGCGTGAACAGGTTAGGGCGTGGACGCAAAGTGCGCTAGCACACTGGAATCAAACGGTTACTGTAAGCAAGGTATCCGCAGAACAAAGTCAGGATGCAGTATAGAGCCTGAGTTAGTTAGTGAACACACCCCGTCTCCACTCAATAATGTTGATAGTATTCTATATGAGCATAGTGATGTTGCACCTCCAGGACTAGTTTATAGATTCATTCTTACTATTGCTGTGTTACTATTTAAGTCCTTTGCAAATGTTGGTTTAATAACGTATTCATTCATGTctgctgtattatttttttatgttgaccTATTTATGATTCAttatctatttattatttaagttATTTCAAAAATGCTACCTGAGAAGATTTTAAATGGTAACAAAGAGAAGGAAATCATTTCCTCTGCATTGTTGAACAAAGAGGAAATATTTTAAGATATCAACTATGAATTGTTTTATAtatcttattatttatttaaaatactgGGATCTTTTTAAGTGCAAATATTTTGTAACGGAaagttttttaataattttctaaagatgttttttttttttcttctttttttggtgCTTCTGTTTTTTATGATttcccctttttattttcacaaacTATTTTTGAGTACATTGCAATACACCGGGAATATTGAGCTGCACATATTTGGTATTTATTTGGtgatgaaggaaaaaaaaaaaaaagtgattgtgaatatttattttgtattgtctCTGTGTTAATTATGGCTGTGTCTGGATAAGTCTTTAAGTTGCTCTTAAAATAAAGGTTAACCCACAGTGAA

Function


GO: NA

KEGG:

id description
K23192 MYT1; myelin transcription factor 1

RNA


RNA id representative length rna type GC content exon number start site end site
XM_039799378.1 True 4646 mRNA 0.52 22 3958556 3982281

Neighbor


gene id symbol gene type direction distance location
LOC120559447 lactbl1,LOC103362248,LOC100707689,LOC101473793,LOC102312186 coding upstream 224165 3725961 ~ 3734391 (+)
LOC120559389 NA coding upstream 773376 3178297 ~ 3185180 (+)
LOC120558536 NA coding upstream 1131844 2825257 ~ 2826712 (+)
LOC120558526 NA coding upstream 1201509 2753513 ~ 2757047 (+)
LOC120559413 NA coding upstream 1296214 2661572 ~ 2662342 (+)
LOC120558402 LOC103357835,LOC104954328 coding downstream 22984 4005265 ~ 4014601 (+)
mfn2 mfn2 coding downstream 48242 4030523 ~ 4059713 (+)
LOC120559787 LOC103357833 coding downstream 102413 4084694 ~ 4180336 (+)
LOC120558381 LOC100699862,LOC103374679,LOC104941073 coding downstream 272359 4254640 ~ 4258571 (+)
LOC120559099 NA coding downstream 284594 4266875 ~ 4281526 (+)
G47045 NA non-coding upstream 22966 3934329 ~ 3935590 (+)
LOC120559454 NA non-coding upstream 32691 3920578 ~ 3925865 (+)
G47006 NA non-coding upstream 77556 3878792 ~ 3881000 (+)
G46997 NA non-coding upstream 86417 3870375 ~ 3872139 (+)
G46996 NA non-coding upstream 88318 3867151 ~ 3870238 (+)
G47062 NA non-coding downstream 32911 4015192 ~ 4019079 (+)
G47076 NA non-coding downstream 73393 4055674 ~ 4055963 (+)
G47113 NA non-coding downstream 91747 4074028 ~ 4074900 (+)
LOC120558383 NA non-coding downstream 276538 4258819 ~ 4264632 (+)
LOC120558318 NA non-coding downstream 677185 4659466 ~ 4666871 (+)
gpr173 LOC104932793,LOC101475032,LOC100694027,LOC104957049 other upstream 92758 3843064 ~ 3865798 (+)
LOC120559404 NA other upstream 443798 3448104 ~ 3514758 (+)
LOC120559414 NA other upstream 653919 3279361 ~ 3304637 (+)
LOC120559392 NA other upstream 670467 3146481 ~ 3288089 (+)
G46574 NA other upstream 1188103 2745898 ~ 2770453 (+)
LOC120559501 NA other downstream 790651 4772932 ~ 4775358 (+)
G47444 NA other downstream 2216765 6199046 ~ 6200594 (+)
ccm2l ccm2l,LOC102778549 other downstream 2715712 6697993 ~ 6720932 (+)
G47903 LOC104965021 other downstream 4130160 8112441 ~ 8116228 (+)
pkig pkig other downstream 4360469 8342750 ~ 8380578 (+)

Expression



Co-expression Network