LOC120558402 (LOC103357835,LOC104954328)


Basic Information

Item Value
gene id LOC120558402
gene name LOC103357835,LOC104954328
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 4005265 ~ 4014601 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799383.1
CTTCCAGCGCGGCGCCCAGCAGTCCAGGCCCGGAGTCTAACAAACATCTTTAAACTTGTTCCAAAATGTCGATATGGAGACGAAATGGAGGCCGGACCGAGGCTCAGTCGGTCTGTAAAGATGTCAAGCTGCCCCTGTGATTCAGCCGCTGTGACCGGCGTTCAGGGCTGCTGAATACTAAAATAGACCGCGGGCCAACACAAGAGCTCTTCTCAGGAAACACAGGCCCAGTCAGAGCTTCCACAGCTCCTCATCACCGCAGCCCTTTTGGGGTTGCTATGGCAGCTGCTGTCACAGAAAGCAAGTGCTGGACACAGCATGCCCCAGTAAGGCAGGACAGAGCACTAGTCATTGCCACAAGAGACCATCAAACAGTCAACAAGCGGCACTTAGCAGTAATTCTAGCACTCCAAGTTAACAAAACGACCAGAGGTCTTGTAGGCTGATGCTGAGCTCTCTGGAGGATCCTCATGAgtcttgtctgtgtgttctcCGGCTCTTGGCCAGAGTCCctgtgcagcagcagagccaCTACTGTTTCTCCTGTTAGACCATGTTTCACCAGCAGGACCATCTAAAGAGCCAGCTGCAGGACAGCCCCCCCGCCAGCAGGCAGCTCTTCCACTGCCACGAGTGTGGAAAGCAGTACAACACCCAGCTGGGTTATAGACGCCACCTGGTGGCAGCCCACAGTGCTGCAGCGGGCCTGCCCTGTCCAGAGGGGGCGCCGTCCCTGCTGGAGCACCTGAGCAGCCATATTGACAGGCCTCCGCCATCCGAGGCTAGCGCTACCGTGCCAGTGCGGGAGAGGAAGTACTCGTGCGAGCGATGCGACCGCCGCTTTTACACTCGTAAGGATGTACGGCGTCACGCCGTGGTGCACACTGGGCGCCGTGACTTCCTGTGCCCGCGCTGTGCACAGCGCTTTGGCCGCAGAGACCACCTGACCCGCCATTTGAAGAAGAGCCATGCCCAGGAGTCAGGGTTGATGCCACCCTGTGCACCCAGCACTCCTGTGGCCACACCGAGCCCTGCCCCCCCCCAGGGCTCGGTGAAGGAGGAGCCCAGCCCCGTGGCCTGTGATATGGGCTCTGTCTCCAAGGAGCCCATGGAGACTTTCTCCAGGGACATGTACAACTCCTACCCCATGGCCAACGCTGTCCCCGGGATGGGCCACCCTCATGGCCTCATGCAGGGCTCCTTGTCCTCGAGTATGGGTGTGGCTCGCCACATGCCCCCCCAATCTTCTCACCCCCACCACCATCACCTGCAGCCCCCAGTGGCTCCGCAGCAGCAGCCCTACAGCAACATGGCCAGGTACCAACACGGATCTACCTCATATCCTCGTGCCGACGTGGACAGTTTCCTGCTGGACCTGCAGAGTGCCCCCCCACCTCACCTGGGTGCAGTCAACTCCTCTACCTCTACTTCCGCCTCCCCTCAGAGGGAGGTGCCGGGTGAAGGCTTGTGTGCTGGCAGCGACCCCCACCTGCTGTCCAGGAGCCCCGCCATCACCTCCACCGAGCTGTCCTGCACCACTAACATGGACCTCGGGCCCCTGCTGGGCTTCTTGCCTTTCAGCCTGCCGCCCTACAGCCCCCACATGGGGATGGGAGGGTTGGTGATGAGCTATCCCcccgccaccaccaccacctcccccTCATCCTCTTCCACTGGGCTGTCCTCCCAGGCTCCGGGGCCTTTCACCTTCTTCCAGCCTCCCCAGGCTCATGTACCACAGGGCCCTGGAGCCCATAACCACAGCCAGCTACCTCAGGCATACAGCAGTCCTGCTATGAGCACTTCCAGCTCCCTACCTCACTACTACCAGGCCTTTCAGCAGTAAGCAGCTCTGGCTCCACAAAAGTTGCCTTCACACGTGCTCACACTTTTTTCACGAAAAGGCTAAGACATGAAACTGGCATCTTTTATTGTAAAACAAATATGTAACTTTAGCCTGTCAGTGCTAATGAAGCtaatcttacttttttttttttttttttt

Function

NR:

description
PREDICTED: zinc finger protein PLAGL2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799383.1 True 2004 mRNA 0.58 2 4005265 4014601

Neighbor

gene id symbol gene type direction distance location
LOC120558400 NA coding upstream 22984 3958556 ~ 3982281 (+)
LOC120559447 lactbl1,LOC103362248,LOC100707689,LOC101473793,LOC102312186 coding upstream 270874 3725961 ~ 3734391 (+)
LOC120559389 NA coding upstream 820085 3178297 ~ 3185180 (+)
LOC120558536 NA coding upstream 1178553 2825257 ~ 2826712 (+)
LOC120558526 NA coding upstream 1248218 2753513 ~ 2757047 (+)
mfn2 mfn2 coding downstream 15922 4030523 ~ 4059713 (+)
LOC120559787 LOC103357833 coding downstream 70093 4084694 ~ 4180336 (+)
LOC120558381 LOC100699862,LOC103374679,LOC104941073 coding downstream 240039 4254640 ~ 4258571 (+)
LOC120559099 NA coding downstream 252274 4266875 ~ 4281526 (+)
LOC120558632 LOC101473708,LOC108431628,LOC107592856 coding downstream 416787 4431388 ~ 4587064 (+)
G47045 NA non-coding upstream 69675 3934329 ~ 3935590 (+)
LOC120559454 NA non-coding upstream 79400 3920578 ~ 3925865 (+)
G47006 NA non-coding upstream 124265 3878792 ~ 3881000 (+)
G46997 NA non-coding upstream 133126 3870375 ~ 3872139 (+)
G46996 NA non-coding upstream 135027 3867151 ~ 3870238 (+)
G47062 NA non-coding downstream 591 4015192 ~ 4019079 (+)
G47076 NA non-coding downstream 41073 4055674 ~ 4055963 (+)
G47113 NA non-coding downstream 59427 4074028 ~ 4074900 (+)
LOC120558383 NA non-coding downstream 244218 4258819 ~ 4264632 (+)
LOC120558318 NA non-coding downstream 644865 4659466 ~ 4666871 (+)
gpr173 LOC104932793,LOC101475032,LOC100694027,LOC104957049 other upstream 139467 3843064 ~ 3865798 (+)
LOC120559404 NA other upstream 490507 3448104 ~ 3514758 (+)
LOC120559414 NA other upstream 700628 3279361 ~ 3304637 (+)
LOC120559392 NA other upstream 717176 3146481 ~ 3288089 (+)
G46574 NA other upstream 1234812 2745898 ~ 2770453 (+)
LOC120559501 NA other downstream 758331 4772932 ~ 4775358 (+)
G47444 NA other downstream 2184445 6199046 ~ 6200594 (+)
ccm2l ccm2l,LOC102778549 other downstream 2683392 6697993 ~ 6720932 (+)
G47903 LOC104965021 other downstream 4097840 8112441 ~ 8116228 (+)
pkig pkig other downstream 4328149 8342750 ~ 8380578 (+)

Expression


Co-expression Network