LOC120558406


Basic Information

Item Value
gene id LOC120558406
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 10593784 ~ 10747553 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799394.1
TTCTATCTGTGTGCTGCATGTGTGAGTTTCCGGTTTTCTGTGCTGTTTGGTCGTGCCTGCTCGTTCTGGTCTTCCTGGCCTGCGTGTTTTTTGGAACCACTTGTTAAAGCTCCCAGACTTCAGTCAGACTTGGCAGACTCCGTCATGTTTGTCACTTACTTCCTACTGCTGAGCAGTCTTGGTCTTGTCATTACAACTCAAGCTCAAGACTGCTCCAAACCTGCAGGAGGAGACAACATGGGTTTGAAGGGCGATGACATTCTTTTACAAACATTCCCAGAGGGGAAGAAAGTGACTTTTGCCTGCGATGTTGGCTATGTGACTGCAGGAGGGTCTCCATCCATTACTTGTACTGCTGGCAACTGGACTCCTCTGAAGCTGAAATGCGAGAGGAGGAACTGTGGCAATGCTGGAGAAGTGGACAATGGAAATGTCGATTACCCTGAAGGGACAGAGTTTGGTGATAAACTAGTGGTCACTTGCAACACCGGCTTCCATATGGTCCCCAAGAAAGGTCAAATCCTTTGTGGAGCCCAAGGGTGGATGGACAGGTTGCCTGAATGTGAAGTGGTGACTTGTGATCCGCCAACTGAGGTAGCGAATGCTGTTTTCAGTCCAGTCAAAGAATCCTATGACTATAGAGAAGTTGTACAGTACAGATGTCAAAATGGTTATACAAGTTCAATATCATGTTCAGATCATGGAACATTTGTTCCTGCTCCAACATGTTTCCTGGTTCGTTGTGAGGATCCTAATATAGCCAATGGTCAACAGGTTGATGGTTCTCGACCCCCTCATGGATACAGGTCTACGGTGACATATGAGTGCATATCTGGGTATGTTATGGAAGGAGGACGCACCCTGACATGTGGAGTAGATAGTCAGTGGTTACCTGGACTTCCAACATGTCAAAGGAGGGACTGTGGCTCTGCTGGAGAAGTGGACAACGGAAATGTCGATTACCCTGAAGGGACACGGTTTGGTGATAAACTAGTGGTCACTTGCAACACCGGCTTCAATATAGTCCCCAACAAAGGTCAAATCCTTTGTGGAGCCCAAGGGTGGATGGACAGGTTACCTACATGTGAAGTGGTGACTTGTGATCCGCCACCTGCAGTAGCGAAGGGTGTTTTCAGTCCAGTCAAAGAATCCTATGACTATAGAGAAGTTGTACAGTACAAATGTCAAAGTGATTATACACTTAATGGATCAAGTTCAATATCATGTTCAGAACATGGAACATTTGGTCCTGCTCCAACATGTGTCATTGTTCGATGTGAGGATCCTAATATAGCCAATGGTCAACAGGTTGATGGTTCTCGACCCCCTCATGGATACAGGTCTACGGTGACATATGAGTGCAAATCTGGGTATGTTATAGAAGGAGGACGCACCCTGACATGTGGAATAGATAGTCAGTGGTTACCTGGACTTCCAACATGTCAAAGGAGGGACTGTGGCTCTGCTGGAGAAGTGGAAAACGGAAATGTCGATTACCCTGAAGGGACACGGTTTGGTGATAAACTAGTGGTCACTTGCAACACCGGCTTCAAAATGGTCCCCAACAAAGGTCAAATCATTTGTGGAGCCCAAGGGTGGATGGACAGGTTACCTACATGTGAAGTGGTTCGATGTGAGGATCCTAATATAGCCAATGGTTACCAGGTTAATGGTTCTCGACCCCCTCATGGATACAATTCTACGGTGACATATGAGTGCATATCTGGGTATGTTATGGAAGGAAGACGCACCCTGACATGTGGAATAGATGGTCAGTGGTTACCTGGACTTCCAACATGTCAAAGGAAGAACTGTGGCTCTGCTGGAGATGTGGACAACGGAAATGTCGATTACCCTGAAGGGACACGGTTTGGTGATAAACTAGTGGTCACTTGCAACACCGGCTTCAAAATGGTCCCCATCAATAAAGGTCAAATCTTTTGTGGATCCAAAGGATGGATAGACAGGTTGCCTGTATGTGAAGTGGTGACTTGTGATCCGCCACCTGCGGTAGCAAATGGTGTTTTCAGTCAAGTCAAAGAATCCTATGACTATAGAGAAGTTGTACAGtacaaatgtcaaaatgattATACACTTAATGGATCAAGTTCAGTATCATGTTCGGAATATGGAACATTTGGTCCTTCTCCAACATGTGTcaTGGTTCAATGTGAGGATCCTAATATAGCCAATGGTGAACAGGTTGATGGTTCTCGACCCCCTCATGGATACAGGTCTACGGTGACATACAAGTGCAAATCTGGGTATGTTATGGAAGGAGGACGCACCCTGACATGTGGAATAGATAGTCAGTGGTCACCTGGACTTCCAACATGTCAAAggAGGGACTGTGGCTCTGCTGGAGAAGTGGACAACGGAAATGTTGATTACCCTGAAGGGACACAGTTTGGTGATAGACTAGTGGTCACTTGCAAGACCGGCTTCAATATGGTCCCCAACAAAGGTCAAATCCTTTGTGCAGCCCAAGGGTGGATGGACAGGTTGCCTGAATGTGAAGTGGTGACTTGTGATCCGCCACCTGTGGTAGCGAATGGTGTTTTCAGTCCAGTCAAAGAATCCTATGACTATAGAGAAGTTGTACAGtacaaatgtcaaaatgattATACACTTTCTGGTTCAAGTTCAATATCATGTTCAGAACATGGAACATTTGGTCCTTCTCCAACATGTGTCATGGTTCGATGTGAGGATCCTAATATAGCCAATGGTGAACAGGTTGATGGTTCTCGACCCCCTCATGGATTCAGGTCTACGGTGACATACAAGTGCAAATCTGGGTATGTTATGGAAGGAGGACGCACACTGACATGTGGAATAGATAGTCAGTGGTTACCTGGACTTCCAACATGTCAAAGAGTAACACCCCCACCTaaacccaccaccaccaccaccaccaccaccaccacaacagATTCTCCCCCAGAGACACCAGACAATAACAGACAGACGTTGGCTATAGGCTTGGGTGTAACTGTTGTTGCCCTCGTTGCTATCGTTTCTGGAGCCCTGGTATACAAGcacaaaaaaagCTCCGGGAAAGGTTCTCCTGACAATGTGGctccaaaagagagagaggatgtaGAACTCCCGTTACAAGGATAGACTGCCAAGCACAGCTGAACTCATTTATGCCAAATAAATGGATGtAAGTAAAAAGGGCTGGTTGAGAAGAGGACTTCTTTGACTGACCTGTGCTGTCCCTGTGCAGGCTCAGGGAAatcatcacccccccccccgaacAACAGTCTTAAGCTCAATCCTTAGCTCGTGCTTCAAGCGGCTCCTCCAATAAATCGACAATATTTCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799394.1 True 3329 mRNA 0.46 27 10593784 10747553

Neighbor

gene id symbol gene type direction distance location
LOC120559192 NA coding upstream 10255 10574601 ~ 10583529 (+)
LOC120559190 LOC103365742 coding upstream 53432 10530663 ~ 10540352 (+)
magi3a magi3 coding upstream 67450 10326748 ~ 10526334 (+)
tmem269 LOC103365731,LOC102791044,LOC104928629,LOC100689985,LOC100710458,LOC108237576,LOC101473555 coding upstream 277148 10303395 ~ 10316636 (+)
hspg2 hspg2 coding upstream 305644 10163002 ~ 10288140 (+)
LOC120558407 NA coding downstream 10844 10758397 ~ 10811552 (+)
LOC120558497 NA coding downstream 569877 11317430 ~ 11328619 (+)
rapgef3 LOC103365870 coding downstream 605061 11352614 ~ 11382149 (+)
dazap2 dazap2 coding downstream 751319 11498872 ~ 11503554 (+)
si:ch211-210c8.6 LOC103365959,LOC103139179,LOC106936181,LOC105935261,LOC100690432,LOC102797068,LOC102213155 coding downstream 769091 11516644 ~ 11520131 (+)
G48639 NA non-coding upstream 7241 10586159 ~ 10586543 (+)
LOC120559193 NA non-coding upstream 33544 10544009 ~ 10560240 (+)
G48602 NA non-coding upstream 50858 10511822 ~ 10542926 (+)
G48594 NA non-coding upstream 189025 10404052 ~ 10404759 (+)
G48507 NA non-coding upstream 579401 10010836 ~ 10014383 (+)
G48670 NA non-coding downstream 107949 10855502 ~ 10899132 (+)
G48671 LOC103365835,LOC104948831,LOC100710642 non-coding downstream 120305 10867858 ~ 10871077 (+)
G48680 NA non-coding downstream 159807 10907360 ~ 10960482 (+)
G48679 NA non-coding downstream 162590 10910143 ~ 10912072 (+)
G48755 NA non-coding downstream 460734 11208287 ~ 11208634 (+)
agmat agmat,LOC102790280 other upstream 442533 10139598 ~ 10151251 (+)
ubxn10 NA other upstream 668703 9922600 ~ 9925081 (+)
G48347 NA other upstream 1163837 9404224 ~ 9429947 (+)
LOC120559255 tshz2 other upstream 1471872 8990487 ~ 9121912 (+)
G48162 NA other upstream 1867232 8716767 ~ 8726552 (+)
G48752 NA other downstream 425042 11172595 ~ 11173654 (+)
G48765 NA other downstream 567109 11314662 ~ 11315992 (+)
xkr5l xkr7,LOC103354446,LOC100690518 other downstream 1336899 12084452 ~ 12090773 (+)
LOC120559364 cables2,LOC103354454,LOC100695798 other downstream 1345226 12092779 ~ 12103899 (+)
nol4la LOC103354513,LOC100696587 other downstream 1434656 12182209 ~ 12210409 (+)

Expression


Co-expression Network