emilin3a


Basic Information

Item Value
gene id emilin3a
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 12343319 ~ 12347248 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799407.1
tttacttttaacacGTGGATATTCAAGGATGCATTTTGTGATGGCTGTGAGTCCTTTTGTTTTCGTGACTCTATTTTTGTCACCAGTCGAAACCAAGTTCTACAGACCACTCCAGTTTAACCAGTATAAATCTGGGTATAGTCAACACCATGACCAAGGGAAACCCACCAGCAGACACAAGAACCACTGTGCCTATGTGGTTGAAAAGACAGTGTCCTTCACCCTGCAGGATGGGGCAGCCCCATATGTCAAAGCTGAGTACAACAAGTGTTCCTGGGGTCAAAAATGTCCAACTCTTCAGTATCATCTGATGTACAAACCAATCTACAAGGTGGCACATAAAACCGTCACAGAGCTGGAATGGCGTTGTTGCCCCGGGTATTCTGGTTATGGCTGTATGGAGGGACATCCAGTTTACCAACACCCTATGAAAATGATGCCACCATTCAAGGGCCCACCAATGAAAGGCCCACAATTAAAGGGGCCACAGTTCAAGGGTCCACAGTACAAAGGTCCCATGTTCAAGGGTCCCATGTTCAAGGGCCCACCTATTAACACTTTTGTGAAGGCCAACCCATGGAGTCAACCCAAAGGACCTTCCACCGGCAGTTTTAACTCTTACCAAATGGGCCACTTTGGGCCTCCGAGAACCTCCTCCTACCCAGACACCTCCTTCGAGCCTTATCCGTCTGAGCCAGAGCCAATGCCAGAGCACCAGGAACCACATCACACAGAGCATGACCAAGAACATGAGCATAGCCAAGGACCTGAGGAACATATACCAGAGGAAATCCATCATCCTCCCTCTGGTGGTGACCAGCCCCAGGGCCCAGCTCTAGACAGCGAGACAGAGGAGCGAATATATCGAATGGAGGAGGATGTGCGACGTCTAAACCAGGGTCTGGAGATCCTGAGGGGAACTGTGAATGGACTGGAAGATAGTCTACGAGCCTCGCTGAGAGAGGACGCCAACAGGATGCTGtcagctctgctctctgctgccccTGGTCCTGTTCCTGCTCCAGTTGTAGCATCTGGTCCATCCACTGTAGGGTTTGTAGAGATTCCTGGGGGAGACCCTGAGACAGAGGGTCTAGATGGCAGACACGTGTTTCCAGGCCTTACAGAACTGAATGGAAGGGTCGAGGAGCTCAGGACAGAGCTGCAAGCcaaaacaacagagctacagGAACTCAAAGCAACAGTGACGGGACATGATGAAGCACTGAAGAAGACGTTGAATAGAACAGGGTTGGTATCAGACTCCAATGGCAATCTTGGGGAAAATGCCCAGAAAGCTATGGAGAACTTGATGGATGCCAAGCTGAGTGCAGCCAGGACAGAAATTCTTGGTGGGTTCGAGGAACGTGTAGAGAGTGCAGAGGGCCGATGCAAGGAGAAAGCTGGGCATTTGGGTGGTCAGTGTGAGAGGGAGAAAAGTCAGAGGCAGGAGCAGATGGAGGATGCTCTTGAGGTAAGTAACACACACTTAAGAACAGAGCTGAGAAACCTCAAGGCACAGATCCATGGTTTAAAGGCTACAGAGAGCTGCTCTGGtagactgagtggactggttgaAAGGGTGCACATGCTGGAAACATCAGTGGCAGGCCTCAACCAGTCCCAGGGGCACCTGAGAGTGGAGCTGGGTGGACACAAGGACCACATAGAGGGAATGCTGGAGGGGCGTCTGGGGTATGTAGAGGCCAAGCTCAACCTGACTGGGCAGATTAAAAGTGAGGAGTCTGGAAGAAGGAGGAGTGTCACAGACTCAAATGAGACAGGACAGGGCATGGAGGCCAGAATGGAGGGTAAAATGAGGGATCTGGAAGACCGTTTACTGACGGCTTTAGAGGAGCTGGGTAATGTCACTGCCCCTGCACTGCTGGAGGGTCATGCTGTTCCCACTCTGGAGACAGAGCTGGAATCTCTCCGAGGGAGACTAGAAGTGGATGTGGACAGAGTGCAGAAGCACCTGAGCAACCTTGAGAttctctgctcctcttcctgTTCCTCACCTCAAAACCCATCTGCTTTCCTGGGAGACTCTGCTGTGCCAAGTGCTAACCTGGCAGAGCAGCAGAATGTGAAGGAGGCACTAAACATGCAAAGTGACCAATTAAATAGCCTCAACGTAACACTGCAGAACATCCTGAGTCGTCTGACCCTCAGGGACCAGCAGAAACAAGCAGAGGGAGAGTATCCCATCCAGGGAGAGCTCACAATCCTTAAGTTCAATGTCCGCTCAGTCAACCACACCCTCAAAGGCCTCCAGGATTCTCTGGGGACAATGGTCCACCAGGTGGGTCAAGCCAACAGCTCCTGGCATGAGAGAGAGGCTCGTCTGGCCCAGCAGATGAAGGGCGTGGTGCAGCTGGTTGGGCATCAGGCTTCCATGCTCGGGGCAGGTGAGCGCAGACTGATCCGAGTTAAAGGTGAGCTGCAGGAGATGAAGAGACGACTAGCCGATGAGGTCCGGGGCTGCCGGAGCACAGCTATGGGGGTCCAGAAAGAGGTAACTGAGGTTGGAGGGCGTGTTACCAGTGTGGAGGACCAGTGTAAGGGCCTGAATAACTTGGCAGAGGACCTGGAGAAAATCAGGGAGGAGCTGGAGAGACAATCGAATGGGCTTCTCGTGCAAGTCAATGGGACTCTCTCCAGCCATGCTCAGCAGCTGTCGGAGCTGAGAGGCGGACTCAGAAACTGCACTTCCCAGGTAGAGCCAACACAACAGAGTTTGGAGCCAGAGCTGAGACGAGGGGACACCTTCACTTTGAATTAGTTTAGTTCATATggacaatacttttaaaaaatgaatgaaagagGGGAAATACTCTGCAGGTTTAGTAGGGGTCTACTAAACCTCATCTTATTatctgaaaaaaatacaatggtTTTGAACCTGCACTGAAATAATGGGTTTAGTTAGCTTACATTataaattgaaaacaaaaatggCAGCTAATTCCAACTGTATTAATAACACAGACACGTGAAATTGAATCACGAAGGTGCTAAAATGAAATCTTTGTTTTAATGGACCTTTATTTAGAGCATCAGAGATTGAGGAAGAGAAAAACAACTGTAGAGCTTTCTGTAGGTTTCTGTAGAGCTTACATAGAAATTATTGTATGTAACGGTTGTTTACCAATGTTTACAAGTTTAAGTTTTTGTATTGATTTTTCTTATGTCTAGACTAGAAGTATacgaaatatgtttttatatgaTTTCAGTTCTTGA

Function

NR:

description
EMILIN-3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799407.1 True 3240 mRNA 0.49 5 12343319 12347248

Neighbor

gene id symbol gene type direction distance location
LOC120559656 gid8,LOC100691864,LOC107090700,LOC102225438,LOC105935248,LOC101169608,LOC101073127,LOC108231957,LOC103139083 coding upstream 99518 12241046 ~ 12243801 (+)
LOC120558724 NA coding upstream 201517 12129836 ~ 12141802 (+)
rap1aa LOC106952760,LOC107389464,LOC101074250,LOC103139095,LOC100690250,LOC107090729,LOC105935262,LOC102226994 coding upstream 260477 12068413 ~ 12082842 (+)
kdm5bb LOC103354421 coding upstream 280056 12043095 ~ 12063263 (+)
tuba5 LOC103354413,LOC100695265,LOC101484757,LOC102298344 coding upstream 319372 12017664 ~ 12023947 (+)
opn7d LOC104933009,LOC103354604 coding downstream 4385 12351633 ~ 12363904 (+)
rad21l1 NA coding downstream 21548 12368796 ~ 12379697 (+)
LOC120558417 NA coding downstream 33784 12381032 ~ 12386273 (+)
pqbp1 pqbp1 coding downstream 152121 12499369 ~ 12504342 (+)
LOC120558783 LOC103354697 coding downstream 166006 12513254 ~ 12556372 (+)
G49106 NA non-coding upstream 120265 12220013 ~ 12223054 (+)
G49105 NA non-coding upstream 130804 12211744 ~ 12212515 (+)
G49094 NA non-coding upstream 196793 12146204 ~ 12146526 (+)
G49086 NA non-coding upstream 200792 12142142 ~ 12142527 (+)
G48978 NA non-coding upstream 360584 11953174 ~ 11982735 (+)
G49157 NA non-coding downstream 16845 12364093 ~ 12364441 (+)
G49221 NA non-coding downstream 123202 12470450 ~ 12472272 (+)
G49223 NA non-coding downstream 126839 12474087 ~ 12476025 (+)
G49230 NA non-coding downstream 162794 12510042 ~ 12511578 (+)
G49241 LOC101072313 non-coding downstream 313179 12660427 ~ 12661371 (+)
si:dkey-70p6.1 LOC100692404,LOC101477341 other upstream 39916 12283427 ~ 12303403 (+)
LOC120559657 LOC102305201 other upstream 89259 12245645 ~ 12254060 (+)
trnae-cuc_14 NA other upstream 119681 12223567 ~ 12223638 (+)
nol4la LOC103354513,LOC100696587 other upstream 132910 12182209 ~ 12210409 (+)
LOC120559364 cables2,LOC103354454,LOC100695798 other upstream 239420 12092779 ~ 12103899 (+)
G49209 NA other downstream 105287 12452535 ~ 12458439 (+)
LOC120558314 porcn other downstream 305136 12652384 ~ 12658308 (+)
LOC120559236 LOC103354867 other downstream 447695 12794943 ~ 12844434 (+)
LOC120559134 dvl1 other downstream 513473 12860721 ~ 12886224 (+)
G49538 lmod3 other downstream 1185142 13532390 ~ 13534922 (+)

Expression


Co-expression Network