LOC120558427 (LOC104958737)


Basic Information

Item Value
gene id LOC120558427
gene name LOC104958737
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 15841943 ~ 15847795 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799421.1
AAGGACAGCTGACACTGACAGAGCAGAGTGAACAAAAGTAGTCTCTTAGGCTTTAAACATAACATCCTCTCAGTTCTGACTGGTCATAGATTAGTGTGGAATCAGTCATGTTTCGCAAGACATTTTTCATCTGTTACATTAAGGTGGACTGGGATGTgttcagAACAAGAGTATCGCATATGGACGCAGTGATCCGCAGGTGCCCTTTCCTCACTGTGGTGCCTAGTGTTGTCCTGCAGCTGGCTGGGAAGTCATCACTGGCGAGCTATGCCCAAAAGTGCCCTGTGATGATGGACCTGGCCTCCAGACCTCTGGCCAGAGCTCTGTCCTCTTCAGCTTTTGAATCCAAAGGCTCTCCAACAAATGATGATCAAAAGAATGAAGTGAAGTTGGCCCCAGGGCATGTCACGCCACCTGCTGGCCAGACTGTAGGCTCTAAATGCCCTTTCCTGGCTGCAGAAATGGTGCAGAAAAACAACAGGGTAGTAAGAGAGGCCAGCTTGGAGCTGCAAGAGGACGTCCAGGAAATGAACTCTGTGCCCACAGGGAAACAAGATGTGGATTTATCTGTTGTGGATCTTATCGAGGAAGACAAGGCCAACACAGGGGCACCAAAAACCCGTTTTATACCCATATCTTTCAAAGTGTCACACCTGCTAAAGACTAATCTGCCTGAGGTCACCTTCCAGTATGACGAGTATTTTGAGAAGAAGATTGAAAGCAAGAAGACAGACCACACATACAGGGTTTTTAAGACAGTGAACCGGCGTGCCTCCTCGTTCCCCATGGCAGACGACTACTCCGAGTCCATTCATGCCAAGAGAGACGTGTCTGTGTGGTGCAGCAATGACTACCTCGGCATGAGCCGTCACCCCAAAGTCACCCAGACAATCATcgaGACTTTAAGGAAGCACGGTGCTGGTGCTGGAGGCACACGAAACATTTCAGGGACGAGCAAATTCCACGTGGAACTCGAATACGAGCTAGCTGACCTGCATGACAAAGATGCTGCACTGCTGTTCACTTCTTGCTTTGTAGCCAACGACTCCACATTGTTTACCCTGGCAAAAATGCTACCAGGTTGTGAAATCTACTCCGACGCTGGCAACCACGCCTCAATGATCCAGGGTATAAGAAACAGTGGGGTCAAGAAGTTTATCTTCCGTCACAATGACGTCAGCCACCTGCAAGAGCTGCTTGAGAAGTCTGACCCCTCCACTCCAAAGATTGTTGCCTTTGAGACGGTGCATTCAATGGATGGGGCTGTGTGCCCACTCGAAGAGATGTGTGATATTGCCCACAAGTTTGGTGCCATTACCTTTGTGGATGAAGTTCATGCTGTGGGCTTGTATGGGCTCAGAGGAGGAGGGATCggggacagagacagagtcaTGCACAAGATGGACATCATCTCTGGAACCCTTGGCAAGGCATTTGGCTGCGTGGGTGGCTACATCGCCAGCACCAGCGCCCTGGTGGACACGGTGCGCTCTTACGCTGCAGGCTTCATCTTCACCACTTCCCTGCCCCCTATGCTGCTGGCAGGGGCAAAGGAGtccatcaaggttctgaaaagTGAGGAAGGCCAGGTGCTCAGGAGGAAACATCAGAGGAGCGTCAAGCTGCTCCGACAGATGCTGATGGACTCAGGCCTTCCGGTGGTCCACTGCCCGAGCCACATTATTCCTGTCCGGGTGGCAGACGCAGAGAAGAACACTGAGATCTGTGACATCATGATGTCTCATTACAACATCTACGTCCAGGCAATCAACTACCCCACTGTGGCTAAAGGAGAGGAGCTGCTGCGCATCGcacccacaccacaccacactcCCCAGATGATGTTCTACTTTGTTGACCGGCTGGTGAAAACGTGGAAGGAGGTGGGTATGGAACTGAGGCCACACTCCTCAGCAGAGTGTGACTTCTGCCAGCAGCCTCTTCACTTTGAGCTGATGAGTGAGAGGGAGAAGTCCTATTTCACAGGCCTCAGTCACATGATATCAGCAGTAGCCTGatataaattaaaacattaaatccCTACCAGCCCCACCTCCTATATTCAAgctatttatttaaattcacattaaatagtcaaaataataatacattttatttatagagcacttttcagggtactcaaagacactttacaaaagTTAAAATGATCATCCATTATTATTAATCACACATTAGCATGGCTCTGGCGCCCCAGGTCCGATGCTTGGTCCTGAGTGGTGGGCATCAGATATGTGTATAAAATGTTCTATGTCACCAAAAAAATGTGTGGGTAAAGTGTTGATTTACTCTTGTGTCTTCACTTTTGCATGTATTGACTATGACTTCAAAAGGCCAAACTTTTACAAATACATATATTTGTACATATGTTTGACATTTTCATCATGTAAAGGAATCcctcaataaaaaaacaaatgcaaagcaTTTTAATGAGGCTTTTTACATAGCGCTAGGTTCCAGAGCATCTAAAGGTTGAACTAACATTTTCCAACTCCTATGGGTTGGAGTCCTAAGTGCTGTTTCAGAGAAGCTATGCTAGTAGCAAACATCAGCAAAGGCAATTATGTAttgtttaattgtgttttttatgcTGCCTTTCTAAAAAGTGTATTACTAGGTGGGTTGTCTTATTGATTAGTTGCAAATGTGCATATTACGCGTTCCCCAATATCTATGAGGTGTTACGCAAAATCTAGAATAATCTTCAAGTATGAAGGGAATGAGATAGCAAATGGCATGGAATATCACACACTCACTCCAACCCAGTTGTACAGCGAACACACAGTATCTCAAACCATGTCTCACTTATAGTGTTatctttttacatttacacCAAGGGTATTTGCTGCACATACATGTACTTTATATGTAAACTATTTCATTACATGCAGTTCTTCTGGCTTGTATCAGTTATAACATGTTATGGAGTGTTGCTGTAAGAGCCAATTAGTTCCCTTGGTATAAACCGGAACCAATCTTTGGTTCCTCGGGTGCAACCCCGAAGCACATACAGTTTTTGaccacacgaacacacacacacacacacacacacacacacacaaacacaccaaca
>XM_039799422.1
GAGTAATAgaagcagcagaagaagaagcgttttttttttggaaaactgCCGAGGAACACAAGACTGAGCATCATTTACATGATAAAGGATAAACCAGAACAAGAGTATCGCATATGGACGCAGTGATCCGCAGGTGCCCTTTCCTCACTGTGGTGCCTAGTGTTGTCCTGCAGCTGGCTGGGAAGTCATCACTGGCGAGCTATGCCCAAAAGTGCCCTGTGATGATGGACCTGGCCTCCAGACCTCTGGCCAGAGCTCTGTCCTCTTCAGCTTTTGAATCCAAAGGCTCTCCAACAAATGATGATCAAAAGAATGAAGTGAAGTTGGCCCCAGGGCATGTCACGCCACCTGCTGGCCAGACTGTAGGCTCTAAATGCCCTTTCCTGGCTGCAGAAATGGTGCAGAAAAACAACAGGGTAGTAAGAGAGGCCAGCTTGGAGCTGCAAGAGGACGTCCAGGAAATGAACTCTGTGCCCACAGGGAAACAAGATGTGGATTTATCTGTTGTGGATCTTATCGAGGAAGACAAGGCCAACACAGGGGCACCAAAAACCCGTTTTATACCCATATCTTTCAAAGTGTCACACCTGCTAAAGACTAATCTGCCTGAGGTCACCTTCCAGTATGACGAGTATTTTGAGAAGAAGATTGAAAGCAAGAAGACAGACCACACATACAGGGTTTTTAAGACAGTGAACCGGCGTGCCTCCTCGTTCCCCATGGCAGACGACTACTCCGAGTCCATTCATGCCAAGAGAGACGTGTCTGTGTGGTGCAGCAATGACTACCTCGGCATGAGCCGTCACCCCAAAGTCACCCAGACAATCATcgaGACTTTAAGGAAGCACGGTGCTGGTGCTGGAGGCACACGAAACATTTCAGGGACGAGCAAATTCCACGTGGAACTCGAATACGAGCTAGCTGACCTGCATGACAAAGATGCTGCACTGCTGTTCACTTCTTGCTTTGTAGCCAACGACTCCACATTGTTTACCCTGGCAAAAATGCTACCAGGTTGTGAAATCTACTCCGACGCTGGCAACCACGCCTCAATGATCCAGGGTATAAGAAACAGTGGGGTCAAGAAGTTTATCTTCCGTCACAATGACGTCAGCCACCTGCAAGAGCTGCTTGAGAAGTCTGACCCCTCCACTCCAAAGATTGTTGCCTTTGAGACGGTGCATTCAATGGATGGGGCTGTGTGCCCACTCGAAGAGATGTGTGATATTGCCCACAAGTTTGGTGCCATTACCTTTGTGGATGAAGTTCATGCTGTGGGCTTGTATGGGCTCAGAGGAGGAGGGATCggggacagagacagagtcaTGCACAAGATGGACATCATCTCTGGAACCCTTGGCAAGGCATTTGGCTGCGTGGGTGGCTACATCGCCAGCACCAGCGCCCTGGTGGACACGGTGCGCTCTTACGCTGCAGGCTTCATCTTCACCACTTCCCTGCCCCCTATGCTGCTGGCAGGGGCAAAGGAGtccatcaaggttctgaaaagTGAGGAAGGCCAGGTGCTCAGGAGGAAACATCAGAGGAGCGTCAAGCTGCTCCGACAGATGCTGATGGACTCAGGCCTTCCGGTGGTCCACTGCCCGAGCCACATTATTCCTGTCCGGGTGGCAGACGCAGAGAAGAACACTGAGATCTGTGACATCATGATGTCTCATTACAACATCTACGTCCAGGCAATCAACTACCCCACTGTGGCTAAAGGAGAGGAGCTGCTGCGCATCGcacccacaccacaccacactcCCCAGATGATGTTCTACTTTGTTGACCGGCTGGTGAAAACGTGGAAGGAGGTGGGTATGGAACTGAGGCCACACTCCTCAGCAGAGTGTGACTTCTGCCAGCAGCCTCTTCACTTTGAGCTGATGAGTGAGAGGGAGAAGTCCTATTTCACAGGCCTCAGTCACATGATATCAGCAGTAGCCTGatataaattaaaacattaaatccCTACCAGCCCCACCTCCTATATTCAAgctatttatttaaattcacattaaatagtcaaaataataatacattttatttatagagcacttttcagggtactcaaagacactttacaaaagTTAAAATGATCATCCATTATTATTAATCACACATTAGCATGGCTCTGGCGCCCCAGGTCCGATGCTTGGTCCTGAGTGGTGGGCATCAGATATGTGTATAAAATGTTCTATGTCACCAAAAAAATGTGTGGGTAAAGTGTTGATTTACTCTTGTGTCTTCACTTTTGCATGTATTGACTATGACTTCAAAAGGCCAAACTTTTACAAATACATATATTTGTACATATGTTTGACATTTTCATCATGTAAAGGAATCcctcaataaaaaaacaaatgcaaagcaTTTTAATGAGGCTTTTTACATAGCGCTAGGTTCCAGAGCATCTAAAGGTTGAACTAACATTTTCCAACTCCTATGGGTTGGAGTCCTAAGTGCTGTTTCAGAGAAGCTATGCTAGTAGCAAACATCAGCAAAGGCAATTATGTAttgtttaattgtgttttttatgcTGCCTTTCTAAAAAGTGTATTACTAGGTGGGTTGTCTTATTGATTAGTTGCAAATGTGCATATTACGCGTTCCCCAATATCTATGAGGTGTTACGCAAAATCTAGAATAATCTTCAAGTATGAAGGGAATGAGATAGCAAATGGCATGGAATATCACACACTCACTCCAACCCAGTTGTACAGCGAACACACAGTATCTCAAACCATGTCTCACTTATAGTGTTatctttttacatttacacCAAGGGTATTTGCTGCACATACATGTACTTTATATGTAAACTATTTCATTACATGCAGTTCTTCTGGCTTGTATCAGTTATAACATGTTATGGAGTGTTGCTGTAAGAGCCAATTAGTTCCCTTGGTATAAACCGGAACCAATCTTTGGTTCCTCGGGTGCAACCCCGAAGCACATACAGTTTTTGaccacacgaacacacacacacacacacacacacacacacacaaacacaccaaca
>XM_039799423.1
tgtGGCACTAGGAGACTATTAAGAGAAGAACAAGAGTATCGCATATGGACGCAGTGATCCGCAGGTGCCCTTTCCTCACTGTGGTGCCTAGTGTTGTCCTGCAGCTGGCTGGGAAGTCATCACTGGCGAGCTATGCCCAAAAGTGCCCTGTGATGATGGACCTGGCCTCCAGACCTCTGGCCAGAGCTCTGTCCTCTTCAGCTTTTGAATCCAAAGGCTCTCCAACAAATGATGATCAAAAGAATGAAGTGAAGTTGGCCCCAGGGCATGTCACGCCACCTGCTGGCCAGACTGTAGGCTCTAAATGCCCTTTCCTGGCTGCAGAAATGGTGCAGAAAAACAACAGGGTAGTAAGAGAGGCCAGCTTGGAGCTGCAAGAGGACGTCCAGGAAATGAACTCTGTGCCCACAGGGAAACAAGATGTGGATTTATCTGTTGTGGATCTTATCGAGGAAGACAAGGCCAACACAGGGGCACCAAAAACCCGTTTTATACCCATATCTTTCAAAGTGTCACACCTGCTAAAGACTAATCTGCCTGAGGTCACCTTCCAGTATGACGAGTATTTTGAGAAGAAGATTGAAAGCAAGAAGACAGACCACACATACAGGGTTTTTAAGACAGTGAACCGGCGTGCCTCCTCGTTCCCCATGGCAGACGACTACTCCGAGTCCATTCATGCCAAGAGAGACGTGTCTGTGTGGTGCAGCAATGACTACCTCGGCATGAGCCGTCACCCCAAAGTCACCCAGACAATCATcgaGACTTTAAGGAAGCACGGTGCTGGTGCTGGAGGCACACGAAACATTTCAGGGACGAGCAAATTCCACGTGGAACTCGAATACGAGCTAGCTGACCTGCATGACAAAGATGCTGCACTGCTGTTCACTTCTTGCTTTGTAGCCAACGACTCCACATTGTTTACCCTGGCAAAAATGCTACCAGGTTGTGAAATCTACTCCGACGCTGGCAACCACGCCTCAATGATCCAGGGTATAAGAAACAGTGGGGTCAAGAAGTTTATCTTCCGTCACAATGACGTCAGCCACCTGCAAGAGCTGCTTGAGAAGTCTGACCCCTCCACTCCAAAGATTGTTGCCTTTGAGACGGTGCATTCAATGGATGGGGCTGTGTGCCCACTCGAAGAGATGTGTGATATTGCCCACAAGTTTGGTGCCATTACCTTTGTGGATGAAGTTCATGCTGTGGGCTTGTATGGGCTCAGAGGAGGAGGGATCggggacagagacagagtcaTGCACAAGATGGACATCATCTCTGGAACCCTTGGCAAGGCATTTGGCTGCGTGGGTGGCTACATCGCCAGCACCAGCGCCCTGGTGGACACGGTGCGCTCTTACGCTGCAGGCTTCATCTTCACCACTTCCCTGCCCCCTATGCTGCTGGCAGGGGCAAAGGAGtccatcaaggttctgaaaagTGAGGAAGGCCAGGTGCTCAGGAGGAAACATCAGAGGAGCGTCAAGCTGCTCCGACAGATGCTGATGGACTCAGGCCTTCCGGTGGTCCACTGCCCGAGCCACATTATTCCTGTCCGGGTGGCAGACGCAGAGAAGAACACTGAGATCTGTGACATCATGATGTCTCATTACAACATCTACGTCCAGGCAATCAACTACCCCACTGTGGCTAAAGGAGAGGAGCTGCTGCGCATCGcacccacaccacaccacactcCCCAGATGATGTTCTACTTTGTTGACCGGCTGGTGAAAACGTGGAAGGAGGTGGGTATGGAACTGAGGCCACACTCCTCAGCAGAGTGTGACTTCTGCCAGCAGCCTCTTCACTTTGAGCTGATGAGTGAGAGGGAGAAGTCCTATTTCACAGGCCTCAGTCACATGATATCAGCAGTAGCCTGatataaattaaaacattaaatccCTACCAGCCCCACCTCCTATATTCAAgctatttatttaaattcacattaaatagtcaaaataataatacattttatttatagagcacttttcagggtactcaaagacactttacaaaagTTAAAATGATCATCCATTATTATTAATCACACATTAGCATGGCTCTGGCGCCCCAGGTCCGATGCTTGGTCCTGAGTGGTGGGCATCAGATATGTGTATAAAATGTTCTATGTCACCAAAAAAATGTGTGGGTAAAGTGTTGATTTACTCTTGTGTCTTCACTTTTGCATGTATTGACTATGACTTCAAAAGGCCAAACTTTTACAAATACATATATTTGTACATATGTTTGACATTTTCATCATGTAAAGGAATCcctcaataaaaaaacaaatgcaaagcaTTTTAATGAGGCTTTTTACATAGCGCTAGGTTCCAGAGCATCTAAAGGTTGAACTAACATTTTCCAACTCCTATGGGTTGGAGTCCTAAGTGCTGTTTCAGAGAAGCTATGCTAGTAGCAAACATCAGCAAAGGCAATTATGTAttgtttaattgtgttttttatgcTGCCTTTCTAAAAAGTGTATTACTAGGTGGGTTGTCTTATTGATTAGTTGCAAATGTGCATATTACGCGTTCCCCAATATCTATGAGGTGTTACGCAAAATCTAGAATAATCTTCAAGTATGAAGGGAATGAGATAGCAAATGGCATGGAATATCACACACTCACTCCAACCCAGTTGTACAGCGAACACACAGTATCTCAAACCATGTCTCACTTATAGTGTTatctttttacatttacacCAAGGGTATTTGCTGCACATACATGTACTTTATATGTAAACTATTTCATTACATGCAGTTCTTCTGGCTTGTATCAGTTATAACATGTTATGGAGTGTTGCTGTAAGAGCCAATTAGTTCCCTTGGTATAAACCGGAACCAATCTTTGGTTCCTCGGGTGCAACCCCGAAGCACATACAGTTTTTGaccacacgaacacacacacacacacacacacacacacacacaaacacaccaaca

Function

NR:

description
PREDICTED: 5-aminolevulinate synthase, nonspecific, mitochondrial-like isoform X1

GO: NA

KEGG:

id description
K00643 E2.3.1.37, ALAS; 5-aminolevulinate synthase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799421.1 True 3091 mRNA 0.46 11 15842747 15847795
XM_039799422.1 False 3025 mRNA 0.46 11 15841943 15847795
XM_039799423.1 False 2956 mRNA 0.46 11 15842931 15847795

Neighbor

gene id symbol gene type direction distance location
spo11 spo11,LOC103368783 coding upstream 1166 15833183 ~ 15840777 (+)
mtg2 mtg2 coding upstream 141567 15697279 ~ 15700376 (+)
LOC120559909 ss18l1,LOC102784650 coding upstream 145065 15687325 ~ 15696878 (+)
lsm14b NA coding upstream 155752 15682257 ~ 15686191 (+)
LOC120558693 cdh4,LOC100707506,LOC101477622 coding upstream 204520 15375411 ~ 15637423 (+)
LOC120559823 LOC103368780,LOC104958736,LOC100707957 coding downstream 2857 15850652 ~ 15855043 (+)
syn2a LOC103368776,LOC108232134,LOC102310081,LOC100708766,LOC102780991,LOC102197631,LOC101471639 coding downstream 74579 15922374 ~ 15934225 (+)
cnbpa cnbp,LOC100709667,LOC101470196 coding downstream 104707 15952502 ~ 15956674 (+)
LOC120559633 LOC102199705,LOC100709941 coding downstream 109788 15957583 ~ 15961003 (+)
LOC120559610 fbln2 coding downstream 255564 16103359 ~ 16127076 (+)
G50029 NA non-coding upstream 136475 15705096 ~ 15705468 (+)
G50017 NA non-coding upstream 172399 15667249 ~ 15669544 (+)
G50011 NA non-coding upstream 202642 15637483 ~ 15639301 (+)
G50014 NA non-coding upstream 419335 15422319 ~ 15422608 (+)
G50003 NA non-coding upstream 564297 15277446 ~ 15277646 (+)
G50077 NA non-coding downstream 101454 15949249 ~ 15951172 (+)
G50218 NA non-coding downstream 437762 16285557 ~ 16285759 (+)
G50280 NA non-coding downstream 577823 16425618 ~ 16425820 (+)
LOC120558722 NA non-coding downstream 696474 16544269 ~ 16545835 (+)
G50318 NA non-coding downstream 719206 16567001 ~ 16569382 (+)
zmp:0000000926 LOC104958731,LOC103370836,LOC104919619 other upstream 42986 15772217 ~ 15798957 (+)
G49776 NA other upstream 1264371 14574542 ~ 14577572 (+)
G49773 LOC103358639 other upstream 1274487 14564867 ~ 14567456 (+)
uhrf1bp1 uhrf1bp1 other upstream 1614055 14205597 ~ 14227888 (+)
hmga1a hmga1,LOC103355299 other upstream 1720921 14113015 ~ 14121022 (+)
slc6a1a iqsec1,LOC104940213,LOC107088165 other downstream 38195 15885990 ~ 15969331 (+)
LOC120559121 NA other downstream 456517 16304312 ~ 16311017 (+)
LOC120559119 LOC104967193 other downstream 475026 16322821 ~ 16379645 (+)
brpf1 brpf1 other downstream 532249 16380044 ~ 16396208 (+)
LOC120559923 NA other downstream 549874 16397669 ~ 16408461 (+)

Expression


Co-expression Network