tspy (LOC103354774)


Basic Information

Item Value
gene id tspy
gene name LOC103354774
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 12697896 ~ 12704089 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799436.1
CGTACCGTAACCAATCAGAGGATTGTTTTTCTGGCACGTCGGTGCACGGATAGTAAGCTAACGGATATTGCAAACATAAACTAATATAAAGAGCGCGTGTTCTTGCTAAAGGCTGTATAGCACGGGAAGATTTCTTTAATATGACCGAGTATTTCTTATTGAACTTGTATTCGTGAAAATGTGGTGCGGCCATCATTGCGAGGACACACGAATTGGGTAACGtgagctaactaacgttagctgtagcctgctaaTTTTTAACGTTCCGCAAGGCCGCGGAGAAATACAAGAGCTGCTTCCTGTTCTTGCTCCATTGAGAATGTAGGTTACATTACGGTCCGATATACAACATCGCAGCGGTTATCCAAGGAGCAAGTTCAGTTGTGTAATCGATTGCATTTAagtttgttttagttgtgcttGCGGGCTACCTAGCTTGTTAGCTatttggctagctagctagcatgaGTGAACTGACGGGCTGCAAACAGTCCGCTGACTCTGCATCGAGGAAACGGTGTCCATCACCCGACCGCGATGAAAGCGCCACGATCCCCTGCAAGTCCACAAAAGTAAGTGACGCAACAAATGAAGCCGGGGTCACTTCGGAAAACTGCAAAAACAGTGACGCTGAGAGTAAAGAAATAGCCGCCAGCGAGGGCCAGTCAAAAGATAACGTTAGTGAGGGGAAACCAGCTGCTGTGCAAGCGGATCAGGGTTCAGAAAGCACGGATCGCACCAGTGCACTGCCTGTCAACAACTCCAATGCTGACGCTCACGATGCCAGCAACACAGAAAAACCACAGTCCTCAGATGCACATGGATCTGCTGACGCAAAGGCAGATACAGAGAAGACAGCAGGAATAAAGCAGCGTCCCTCAGCTTCTCTGGACCAGACCGACTCAGCAGCCATAGCAGCTGCTGAAGCACTTGCCAGTCTCACAGGAGGAGACGGGGAAGACAGTCAAGAGACTCCTTGCTCATCTGAAAAGGCTAACGTTAAACAGGTGAAACAGGGGAGCAAATTCAAACAACGTGGGGGCCACCAGTCCTCAAGAACGGGCTTTAAAACGCAGGCAGCTGCTGCAGATAGCTCCACATCTGTGCACAGTACTGACAGAGAAGATGCAGATGAGATGCCAGAAGCAGATGAAGGTGATGAATCCATATCTGGATCTTCCTCCACTCCAAGCTCCTCTTTCCCGTCAGACAATGAGGACAATGATGATGGGGAGTGTGCCATTGTGTCAGTTAAGATGGCCCCAGAGATGAGACAGTCGGTGGCTCTTCTGGCGCAGGTACAGATGAGACTGGAAGCTCTTGAGAAGAAAAACGCCCGGCTTCACCAACGGCTGGAGCTGAAGATCAGTCGTCAGCGGCGCCCACATCTGGATCAGCGCAGCTCCATCACAAAAACTATTCCTGGCTTCTGGGTGACAGCTCTGTTGAACCATCCTCATCTCTCAGCTCACATTGACGAGACTGATGAAGATGCTCTGAGTTACATGACTGATCTTGAGattgaGTCCTTTAAGAATAATAAACTGGGCTACAGGATCCGCTTCCACTTCAGACGGAACCCGTACTTCCAGAACAACATTATCATGAAGGAGCTGCACCTTGGGATGGGAGGATCGCCCATGTCCTTCTCCAACCCCATCCTGTGGCATCGTGGACAGAACCTGACGGCCCACAGCGAACCCAGGAAGTCGTCGCGTGGGGTCTACCAGACCTTTTTTAGCTGGTTCAGTGACCATAGCAACCCAGGACAAGATGATGTAGCACAGATACTTAAGGACGACCTGTACAGAGACCCTCTGAGATACTACCTCACTCCACTCTGGGAACCCAGGGAGAACGGCAGTGGTGGCAGCGGGGCCAGAGCAGCTGACAACGGTAATGGAGGCGAGTGTGTAGTAATCTCCGACTCAGACGATGAACCCGGTGAGGAAGCTGGTCAGGCGGAACAAGGCCACAGCAGGGAGGAGGAAGACgaggatgatgaagaggaggaggaggaggaagaagaagaagaagaagaggaggaggaggagagggggccAAGCGCTGATGAGAGtccagaggaggaggatgatggTGGAGAAATTGTGATTGACGGCTCTGATGACAGtgagcaggaagaggaggaggaggcctgAAGAGGTTTATGTCAAAGAAGAAGACGAGTCCTCAAGGGACCAGAGACcaagaagatgaagaaaaggCCTAGGTTGACGAAGAGTACCAGAGCAATGTCATTTTTATGCACATAATatcagtttttgttgttttataccTAAAATACAAAGGAGCATTTTAAATCAGggttaaatgtaataataaagtCAAGGTGGCATGGTTTCCCCTCAATTTTATACAGTCGGGACTGTGTATTCTGATTCACtttttgctaaatgttttttcttttctttttctaaaccagTTCTTGGGCATATTATGCCAGTCACTTCATACAAGTAGTGTTTTCTTCTATTTAGTGAGGAACATTGTACAACAGCCTGCACACATGTAGGTGAGATCAGGATTGCCGCTACTTGTTGGCATAACATTTTGCAATGCAAAATCTTCAAATTAATGTAGAAACCTTCAGTAGCGTTATTTTAGAGCTACAAAGATTGATCGATTCAATTattcgccaactattttgataatcgattaaatcggtttgagtcatctTTTTATTAAAAGGTAAACATTTTATTCTAGCTTATAGGTTATTCACGCCTCTGTGACAATAAACTGAAAATCTTTTGAGTTGTGAACAAAACTAGACATTTGCAGCCgttatcttgggctttggaaaacgcTGATCAGCATTTTCTAGACCAATGAgctaatcgactatgaaaaataatcgttagttgcagccctacattaTTACGTGATTATTTCAAGGCAAAGTTTTGGCTGTTTGTAGAAttgacaagacaaaaaaaatgtcaagttAAATTGATAATTATAATGACAGTACATTTCAGATGCACAGTACTGAACCAAAATCCGCTCTCAGGGATGATCATGGTTGTAGTTTTATTGGAAGAACCTTACTGATCTTCAGACATTTACACTCTGGTTATGGTTGGCTGTGTATAAGGAAACGTGTACTCTACTGTAGTAAATAGGAACAAATGTTTTAATATGCTACCTGTGTTTTTCCTTCTACATCTATGTTCAGTCTTGTTACACACCAACCTCCACCCCTGTTAATCTTTAAACCATCTCTGATGTTTAAAATCATGGCGTAGTTTGAACATTTCTGTAGATTCCACCATTTTGTAACATGCTCCTACAATAAATAGCTgagttttgtattttttcccccttaaaaCTTAATTTGAAATTGCTTTCTAAAACATTAGTTTTCACGTAATGTGTTTTAAGGTTTGTGTTATCTTCTTTTTAAAAAGATGGTATTTATTACACGTTTTTCTACGCGTCCACAGTCGGCATGCCTGTGAGCATGAACTGTTAAAGACAGGATGATTCCATCACTTCCAAGGCTTTTTCTGTGCACAGTGTCGGTAAATGTCATTAAATTCACAGCAACATTATGGGGTGCACTGTAACAAAACTAGTATTTGTATTTGCTTACTTTTCTTAGCAATGACCTGTAAATATTTCAGCATTGTCTTTTGGATAAGACAAGTACACGTGTTTAATCCATGGATAAATTTATCAAATAATCTGGAGagttttttttcatcaacaTAACCAGAAAGTTATattttgtgtgctgtgttttatagAACACTGTAGTTTAAAGATACCTACTTGTTTGTTGCTTTGGTTCATTTTGTTTGCTTAAAGATAAATGTCCACCTTTTGACCTAATAAAATAGGCAGTTGTTTGAA
>XM_039799437.1
CGTACCGTAACCAATCAGAGGATTGTTTTTCTGGCACGTCGGTGCACGGATAGTAAGCTAACGGATATTGCAAACATAAACTAATATAAAGAGCGCGTGTTCTTGCTAAAGGCTGTATAGCACGGGAAGATTTCTTTAATATGACCGAGTATTTCTTATTGAACTTGTATTCGTGAAAATGTGGTGCGGCCATCATTGCGAGGACACACGAATTGGGTAACGtgagctaactaacgttagctgtagcctgctaaTTTTTAACGTTCCGCAAGGCCGCGGAGAAATACAAGAGCTGCTTCCTGTTCTTGCTCCATTGAGAATGTAGGTTACATTACGGTCCGATATACAACATCGCAGCGGTTATCCAAGGAGCAAGTTCAGTTGTGTAATCGATTGCATTTAagtttgttttagttgtgcttGCGGGCTACCTAGCTTGTTAGCTatttggctagctagctagcatgaGTGAACTGACGGGCTGCAAACAGTCCGCTGACTCTGCATCGAGGAAACGGTGTCCATCACCCGACCGCGATGAAAGCGCCACGATCCCCTGCAAGTCCACAAAAGTAAGTGACGCAACAAATGAAGCCGGGGTCACTTCGGAAAACTGCAAAAACAGTGACGCTGAGAGTAAAGAAATAGCCGCCAGCGAGGGCCAGTCAAAAGATAACGTTAGTGAGGGGAAACCAGCTGCTGTGCAAGCGGATCAGGGTTCAGAAAGCACGGATCGCACCAGTGCACTGCCTGTCAACAACTCCAATGCTGACGCTCACGATGCCAGCAACACAGAAAAACCACAGTCCTCAGATGCACATGGATCTGCTGACGCAAAGGCAGATACAGAGAAGACAGCAGGAATAAAGCAGCGTCCCTCAGCTTCTCTGGACCAGACCGACTCAGCAGCCATAGCAGCTGCTGAAGCACTTGCCAGTCTCACAGGAGGAGACGGGGAAGACAGTCAAGAGACTCCTTGCTCATCTGAAAAGGCTAACGTTAAACAGGTGAAACAGGGGAGCAAATTCAAACAACGTGGGGGCCACCAGTCCTCAAGAACGGGCTTTAAAACGCAGGCAGCTGCTGCAGATAGCTCCACATCTGTGCACAGTACTGACAGAGAAGATGCAGATGAGATGCCAGAAGCAGATGAAGGTGATGAATCCATATCTGGATCTTCCTCCACTCCAAGCTCCTCTTTCCCGTCAGACAATGAGGACAATGATGATGGGGAGTGTGCCATTGTGTCAGTTAAGATGGCCCCAGAGATGAGACAGTCGGTGGCTCTTCTGGCGCAGGTACAGATGAGACTGGAAGCTCTTGAGAAGAAAAACGCCCGGCTTCACCAACGGCTGGAGCTGAAGATCAGTCGTCAGCGGCGCCCACATCTGGATCAGCGCAGCTCCATCACAAAAACTATTCCTGGCTTCTGGGTGACAGCTCTGTTGAACCATCCTCATCTCTCAGCTCACATTGACGAGACTGATGAAGATGCTCTGAGTTACATGACTGATCTTGAGattgaGTCCTTTAAGAATAATAAACTGGGCTACAGGATCCGCTTCCACTTCAGACGGAACCCGTACTTCCAGAACAACATTATCATGAAGGAGCTGCACCTTGGGATGGGAGGATCGCCCATGTCCTTCTCCAACCCCATCCTGTGGCATCGTGGACAGAACCTGACGGCCCACAGCGAACCCAGGAAGTCGTCGCGTGGGGTCTACCAGACCTTTTTTAGCTGGTTCAGTGACCATAGCAACCCAGGACAAGATGATGTAGCACAGATACTTAAGGACGACCTGTACAGAGACCCTCTGAGATACTACCTCACTCCACTCTGGGAACCCAGGGAGAACGGCAGTGGTGGCAGCGGGGCCAGAGCAGCTGACAACGGTAATGGAGGCGAGTGTGTAGTAATCTCCGACTCAGACGATGAACCCGGTGAGGAAGCTGGTCAGGCGGAACAAGGCCACAGCAGGGAGGAGGAAGACgaggatgatgaagaggaggaggaggaggaagaagaagaagaagaagaggaggaggaggagagggggccAAGCGCTGGCTCTGATGACAGtgagcaggaagaggaggaggaggcctgAAGAGGTTTATGTCAAAGAAGAAGACGAGTCCTCAAGGGACCAGAGACcaagaagatgaagaaaaggCCTAGGTTGACGAAGAGTACCAGAGCAATGTCATTTTTATGCACATAATatcagtttttgttgttttataccTAAAATACAAAGGAGCATTTTAAATCAGggttaaatgtaataataaagtCAAGGTGGCATGGTTTCCCCTCAATTTTATACAGTCGGGACTGTGTATTCTGATTCACtttttgctaaatgttttttcttttctttttctaaaccagTTCTTGGGCATATTATGCCAGTCACTTCATACAAGTAGTGTTTTCTTCTATTTAGTGAGGAACATTGTACAACAGCCTGCACACATGTAGGTGAGATCAGGATTGCCGCTACTTGTTGGCATAACATTTTGCAATGCAAAATCTTCAAATTAATGTAGAAACCTTCAGTAGCGTTATTTTAGAGCTACAAAGATTGATCGATTCAATTattcgccaactattttgataatcgattaaatcggtttgagtcatctTTTTATTAAAAGGTAAACATTTTATTCTAGCTTATAGGTTATTCACGCCTCTGTGACAATAAACTGAAAATCTTTTGAGTTGTGAACAAAACTAGACATTTGCAGCCgttatcttgggctttggaaaacgcTGATCAGCATTTTCTAGACCAATGAgctaatcgactatgaaaaataatcgttagttgcagccctacattaTTACGTGATTATTTCAAGGCAAAGTTTTGGCTGTTTGTAGAAttgacaagacaaaaaaaatgtcaagttAAATTGATAATTATAATGACAGTACATTTCAGATGCACAGTACTGAACCAAAATCCGCTCTCAGGGATGATCATGGTTGTAGTTTTATTGGAAGAACCTTACTGATCTTCAGACATTTACACTCTGGTTATGGTTGGCTGTGTATAAGGAAACGTGTACTCTACTGTAGTAAATAGGAACAAATGTTTTAATATGCTACCTGTGTTTTTCCTTCTACATCTATGTTCAGTCTTGTTACACACCAACCTCCACCCCTGTTAATCTTTAAACCATCTCTGATGTTTAAAATCATGGCGTAGTTTGAACATTTCTGTAGATTCCACCATTTTGTAACATGCTCCTACAATAAATAGCTgagttttgtattttttcccccttaaaaCTTAATTTGAAATTGCTTTCTAAAACATTAGTTTTCACGTAATGTGTTTTAAGGTTTGTGTTATCTTCTTTTTAAAAAGATGGTATTTATTACACGTTTTTCTACGCGTCCACAGTCGGCATGCCTGTGAGCATGAACTGTTAAAGACAGGATGATTCCATCACTTCCAAGGCTTTTTCTGTGCACAGTGTCGGTAAATGTCATTAAATTCACAGCAACATTATGGGGTGCACTGTAACAAAACTAGTATTTGTATTTGCTTACTTTTCTTAGCAATGACCTGTAAATATTTCAGCATTGTCTTTTGGATAAGACAAGTACACGTGTTTAATCCATGGATAAATTTATCAAATAATCTGGAGagttttttttcatcaacaTAACCAGAAAGTTATattttgtgtgctgtgttttatagAACACTGTAGTTTAAAGATACCTACTTGTTTGTTGCTTTGGTTCATTTTGTTTGCTTAAAGATAAATGTCCACCTTTTGACCTAATAAAATAGGCAGTTGTTTGAA

Function

NR:

description
PREDICTED: LOW QUALITY PROTEIN: testis-specific Y-encoded-like protein 1

GO:

id name namespace
GO:0006334 nucleosome assembly biological_process
GO:0005634 nucleus cellular_component

KEGG:

id description
K11285 TSPYL2, CINAP, DENTT; TSPY-like 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799436.1 True 3873 mRNA 0.44 8 12697896 12704089
XM_039799437.1 False 3825 mRNA 0.43 7 12697896 12704089

Neighbor

gene id symbol gene type direction distance location
wdr13 wdr13 coding upstream 27502 12662475 ~ 12670394 (+)
LOC120559891 NA coding upstream 47121 12646536 ~ 12650775 (+)
kdm5c kdm5c coding upstream 86728 12590907 ~ 12611168 (+)
iqsec2b iqsec2,LOC102793072,LOC103355372,LOC101076483 coding upstream 110528 12561811 ~ 12587368 (+)
LOC120558783 LOC103354697 coding upstream 141524 12513254 ~ 12556372 (+)
LOC120559796 LOC104924663,LOC103354782 coding downstream 4554 12708643 ~ 12722596 (+)
zgc:162200 LOC103354841 coding downstream 40471 12744560 ~ 12766040 (+)
nt5dc2 nt5dc2,LOC102799881 coding downstream 64720 12768809 ~ 12779241 (+)
aurkaip1 aurkaip1,LOC102776880 coding downstream 141529 12845618 ~ 12847975 (+)
LOC120559133 mxra8 coding downstream 144723 12848812 ~ 12859392 (+)
G49301 gpr173,LOC107086794,LOC102204197,LOC101466594,LOC108231911 non-coding upstream 20218 12674342 ~ 12677678 (+)
G49241 LOC101072313 non-coding upstream 36525 12660427 ~ 12661371 (+)
G49230 NA non-coding upstream 186318 12510042 ~ 12511578 (+)
G49223 NA non-coding upstream 221871 12474087 ~ 12476025 (+)
G49221 NA non-coding upstream 225624 12470450 ~ 12472272 (+)
LOC120559802 NA non-coding downstream 22511 12726600 ~ 12732417 (+)
G49314 NA non-coding downstream 76526 12780615 ~ 12783788 (+)
G49330 NA non-coding downstream 124492 12828581 ~ 12840565 (+)
G49334 NA non-coding downstream 216916 12921005 ~ 12928180 (+)
G49346 NA non-coding downstream 224167 12928256 ~ 12928471 (+)
LOC120558314 porcn other upstream 39588 12652384 ~ 12658308 (+)
G49209 NA other upstream 239457 12452535 ~ 12458439 (+)
si:dkey-70p6.1 LOC100692404,LOC101477341 other upstream 394493 12283427 ~ 12303403 (+)
LOC120559657 LOC102305201 other upstream 443836 12245645 ~ 12254060 (+)
trnae-cuc_14 NA other upstream 474258 12223567 ~ 12223638 (+)
LOC120559236 LOC103354867 other downstream 90854 12794943 ~ 12844434 (+)
LOC120559134 dvl1 other downstream 156632 12860721 ~ 12886224 (+)
G49538 lmod3 other downstream 828301 13532390 ~ 13534922 (+)
LOC120558697 LOC103355228,LOC101470284,LOC102288766,LOC101062828,LOC100700879,LOC102197182,LOC102790759 other downstream 954643 13658732 ~ 13724990 (+)
hmga1a hmga1,LOC103355299 other downstream 1408926 14113015 ~ 14121022 (+)

Expression


Co-expression Network