npbwr2b (LOC103358254,LOC104941021)


Basic Information

Item Value
gene id npbwr2b
gene name LOC103358254,LOC104941021
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 5747209 ~ 5750232 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799469.1
GGCTGGAGAGCAGTACGTCTCACACAGAGGTAAGACCGGAGGAGAGGGACTCTACCCGGGGACACAGAGGACGGTAAACCCGCCTGAACCCACTCTACGCACTAAGAAATATCTGTGAAATACTTTATGTGTCGACTGAATATACAGTATTGGGATGCGCCACTCGTGCGTAAAAAAGCCTGGCACCGTCTCCAGAGCGCCCACGAAGCACCGGGAGGAACCCATACATAACCATCGTTAAACCTTATTGTTGGACACTGTCAACCTTTTTCAATACTCGTTTAAAATCCCAGCACCGGGGGAGGacagagtcagagggaggaggaggggaaggaaaaacaaaacgCATCATCGGCAGACTTGATCCGAAAAGGAAAAAGTGAAGGAAGGAACCCGAGTGGAGATTAAACAAAGTGTCACATTTTTTGAACTGGAAATGAATAATCAACCCTGACAAAGCTGACAGCGGGTGGCTTATTGAGTAAGCGTGAGGCAGAGCGTCCGGAGCGTTTTCACACCGAGGACACCAAACAGATTCCACATTAACCGCGGACCAACTCTCCGTGGAAACTACAAGCATCTGTGAAACTACTGACCCTGAATGAACTAGTGGACCTGCAGATACCTTCTTAGTGACTTGCTGGTGGTCCCTGGACCTCAGTTTGGGAAAAGAGGAAAGACTGATCTCTTCTTTCTACTCTGCAGTGATGTAATGGAGGGTTAACACACCTTAACTTGACCTTTTTGTTTGCTGAACTGTGCATAATTAACTTTTAAGGGTCAATGACAAATTCATGTGATGTCTGAAAACTAAGTCCAATACACTGTTTctctaaaaaaaatatttataatttaaaagacaacaaaaggTCCAAGGCACTCTTTCTTTAAAAGCATTTATTTAGATTGCTATTTCCTATCCACATCTTACATTAAAAGTAGACCTGGGCAGCAACCCACGCTCATCGGCACAAAGCAGCCTTCTTCACTTTTTCCCTTCCTAATTTtagaggttttttttcttttcatcccaCAATGCTCAGAGACTCTTAGTGCGTCTTCAAAACATGGAGAACGTGTCCATCCCTGGTGGTGTGCCACCGCCAGTCTGCAACGACTCGGTGGACTTCTACTCCCTTGCGTCAGGCAACCGCACTGACCTGAACTGCACTCCTCCGTCTGAGTTTTACTTCTACGCTGACCTTTACATAATTTTACCGGTCATCTACTCTGTAATCTGTGCCGTGGGGCTGACAGGCAACACAGCTGTCATCTATGTGATCCTCAAAGCCCCCAAGATGAAAACGGTCACCAACATGTTCATCCTGAACTTGGCCATCGCCGACGACTTGTTCACTCTGGTGTTGCCGATCAACATAGCCGAACACCTGCTGCACTACTGGCCTTTTGGCGAGGTTTTGTGCAAAGTCATCCTGAGCATCGACCACTACAACATCTTCTCCAGCATCTATTTCCTGACAGTTATGAGCATTGACCGCTACCTGGTGGTTTTGGCCACGGTGAGGTCCAAGCGCATGCCGTACCGCACCTACCGAGCAGCCAAAATCATCTCGCTCTGCGTCTGGATCCTGGTCATCCTCATTGTCCTGCCTTTCAGCGTTTTCGCCGGCGTCTACATGAACCCAAACGATGGCAGGAAGAGCTGCGTGCTCAGCTTCCCCAGCCCCGAGAGTTTGTGGTTCAAAGCAAGCCGGATCTACACGCTGATCCTGGGCTTCGCCATCCCCGTCTCGACCATCTGCATCCTGTACACCATGATGCTCTACAAGCTGAGGAACATGCGGCTCAACAGCAACGCCAAGGCGCTGGACAAAGCCAAGAAGAAAGTCACCATCATGGTGTTCATCGTCTTGGCCGTATGCCTGTTCTGCTGGACGCCGTTCCACCTCAGCACCATCGTGGCTCTGACCACAGACCTGCGGACTACGCCGCTCCTGATTGGCATCTCCTACTTCATAACCAGCCTGAGCTACGCCAACTCCTGCCTCAACCCGTTCCTCTACGCCTTCCTGGACGATAGCTTCCGGAAAGCCTTCAAGAAAATGTTGGAATGTAGACCGGCCTGAATGTACGACCCAGGGAAAAGCCTGTCGCAGAAGTCCGCAGAGACTTGCTGAGCGAGGACATGGACTGTGAtgaattttttatttgatttggtTCGCTTTGTTAAAGCTGCACTAGGCAACCTTGCGCATTGTTTGCACATGATAGCAAATCTTTCATTTATCTTCGATACACAGCAAACATATAAGATTATGTCTGTAAACACCGCACAGCATCCTGTGACAAAAACCCATCTATAAATGCTTTATACTAGGGATCAACtgatactggtttttcaaggccgattccgattattagtagttcatgaaaccgataaccgatttttttaataaatatg

Function

NR:

description
PREDICTED: neuropeptides B/W receptor type 2-like

GO:

id name namespace
GO:0007218 neuropeptide signaling pathway biological_process
GO:0007268 chemical synaptic transmission biological_process
GO:0016021 integral component of membrane cellular_component
GO:0008188 neuropeptide receptor activity molecular_function

KEGG:

id description
K08377 NPBWR2; neuropeptides B/W receptor 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799469.1 True 2422 mRNA 0.48 3 5747209 5750232

Neighbor

gene id symbol gene type direction distance location
LOC120558307 NA coding upstream 359949 5376303 ~ 5387260 (+)
LOC120558632 LOC101473708,LOC108431628,LOC107592856 coding upstream 1160145 4431388 ~ 4587064 (+)
LOC120559099 NA coding upstream 1465683 4266875 ~ 4281526 (+)
LOC120558381 LOC100699862,LOC103374679,LOC104941073 coding upstream 1488638 4254640 ~ 4258571 (+)
LOC120559787 LOC103357833 coding upstream 1566873 4084694 ~ 4180336 (+)
oprl1 oprl1 coding downstream 313618 6063850 ~ 6234843 (+)
LOC120559680 fam187b,LOC104965325,LOC102795245 coding downstream 511791 6262023 ~ 6272680 (+)
rgs19 LOC103373111 coding downstream 595876 6346108 ~ 6393502 (+)
sox18 LOC104941087,LOC103385144,LOC107094976,LOC100711530,LOC101485236 coding downstream 743337 6493569 ~ 6502180 (+)
xkr7 xkr7,LOC103148205 coding downstream 828954 6579186 ~ 6683911 (+)
G47414 NA non-coding upstream 11476 5735504 ~ 5735733 (+)
G47393 NA non-coding upstream 148637 5598312 ~ 5598572 (+)
G47388 NA non-coding upstream 212697 5533001 ~ 5534512 (+)
G47385 NA non-coding upstream 223234 5523070 ~ 5523975 (+)
G47369 NA non-coding upstream 391098 5355635 ~ 5356111 (+)
G47421 NA non-coding downstream 1486 5751718 ~ 5752149 (+)
G47423 NA non-coding downstream 11637 5761869 ~ 5762081 (+)
G47428 NA non-coding downstream 106333 5856565 ~ 5856998 (+)
G47441 NA non-coding downstream 485962 6236194 ~ 6236826 (+)
G47460 NA non-coding downstream 492693 6242925 ~ 6254574 (+)
LOC120559501 NA other upstream 971851 4772932 ~ 4775358 (+)
gpr173 LOC104932793,LOC101475032,LOC100694027,LOC104957049 other upstream 1881411 3843064 ~ 3865798 (+)
LOC120559404 NA other upstream 2232451 3448104 ~ 3514758 (+)
LOC120559414 NA other upstream 2442572 3279361 ~ 3304637 (+)
LOC120559392 NA other upstream 2459120 3146481 ~ 3288089 (+)
G47444 NA other downstream 448814 6199046 ~ 6200594 (+)
ccm2l ccm2l,LOC102778549 other downstream 947761 6697993 ~ 6720932 (+)
G47903 LOC104965021 other downstream 2362209 8112441 ~ 8116228 (+)
pkig pkig other downstream 2592518 8342750 ~ 8380578 (+)
LOC120559763 NA other downstream 2727891 8478123 ~ 8497394 (+)

Expression


Co-expression Network