LOC120558497


Basic Information

Item Value
gene id LOC120558497
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 11317430 ~ 11328619 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799516.1
ATGAAAGTCTGTAAATTATctcccctcttcttcttcttcctactTCTGAGTTCGACACTCGGAGAGGACACagTGGCAGAAGACATCAGTGTCCATCAGCTGGAGCGGTTAGTGGAGATGCTGACGTCTACGGAGTGCGAGGAGCTTCTGTTCGCCCTCTCTCACCCAGAGGAAAACATCTTCAAGCACGTTGAGCGCCTCTCACCACAAAAAAATCAACTCGATCTTAAGCCTCGAGCCAAGAGAGACACCTCATCTGCTGCAGATAGTGAGGCGCAGTGCCGGACGGCCCTGACAGACTGGATGCTGAGGTACGGCGATCAGACCTACTACGACAGGCTTTCTCGCGCCTTGCAGCACATCGGCAGAACAGACATTGCCATTGaagtgGGGAAGAACATCAACCAGGACAAAGCCTTGAGCTTGAAACGCTACGTTGAAGACTATCACAAATATGTCAACTCTTTAAACTTCCCACCGGTACAATTAGACACAAAGGGCCAACCGCATGAAGAACAGAAGGCCAGAACACGAACACGAAGAGtaagggATCTGACATGGCGTGACCTGGATCTGATCGTGGAGCGGGCCCCCGTTGCTGTGTATCAGAAGGGGCCTATGGATGCAGCTCTACCCCTCTTGTATGGCATTCTGCTGGGCTTCGGAGGCACCTTGCTCACAGGCGTCTCGATACTTGCCGTCATCGTACACATCTCCTTAGAAAGCAGCAGAGCTGTCACCGCAGGGTCACCGGGAGCCCCAGCAGCAAGCTCACGGTTGGAAATGTAATATTGAAAGATGCAGCTTCTGTGAGGTCAGAGGCTGCAAAATAAGCCGCTTAGGGGTTGAAATGGTCACACGTAAATAAAGGCAAAATAGACTATTTGTTTTACAGATGTGTCTTTTATGGAAGATTTAAAATGCCAAAATCTTTCAATCTCTTTGTCCACAACAATCAGCAGAGCCAACATAGAAACCCAATATCGATTCCACCACACCACAActaattatgacaaatatgacAAGTATAATGCAGTTTCAGATAAAGTAATTATCCATGCTGTGTATTGCTAGAGCGGTAGGCATTATTGTCTTGCCAGTGGGTAGATGACTAGCGGTGTGACAGATGCGCTGGAACCCAGCCCTCATACCAAAGGTTGTTCCGGTGTTACTGTGATAGTGATGCCACTCTCTATTTCCCCTCCAAGTGACGGCAATGTGCCCGTCTGGCATCGAAGAACAACTAATTATCCAGCCTGGCGCCTGCTTCCTTCGGAGCCTGCCGATACCTCCACAGGCAATCCAAAAGACTaataacaatgacaatgctagcaGACAATGGAGCACTCTTGGTTGTGATGGCAGCTTCTGGCGGGTGACAGAAGCCAAATAGAAAACACAgagctgtatttttttttggaacGTGTGAAGTAGCGAGGATTGTTAGCAAGCTGAAATTACTTGATATACGAGATGCTGCGGCAAAGTGGGTCCAGAAATTGGCATTGGAAAAgatcagaataaaaaaaattgtctgtATTAGAAGATTCAAAATAACTTTGGTTAACACGTGCAAGCTTAAATTAAGAAAATCATTTGCAATAACAAGGCTATTTTCACATACTCTGCCGAGTAGGTTTCATAACAGCTAGACAGAAAATGCGCTCGTGGCACTGGGGTACTTTCTCGCTTCTTGTTCCCAGTTTCTTACGCTAGCCCTACTTTCTTCTTCGTAATTGAACTAATTACTTCATTATACAAATCGGGCCTAATGTGATTCAGGAGGCAGACAGCTTGGATTAACAGTGGCACTAAGCAGCAATTACAGACAATTAGTTCATAAatcaacatttaaacaaatcataGTGCCAAACACGACTGCATGAGCAACGCTCTAAAAAGGCCAAAAGGGCATTATGGATTTGAGTTTTGACTTATTACCTAAATAATGGCCTACATATTCTGACACACACTACATGCTCTTCTTCTGTAGTCATATTATAGTGCTCTTTTTAATTGATACTGTAATTCATAAACCAATGCATACTTGATTTAAAGGTTTGAAGATTTGGCTTCGTAAAGCAAAAGCAGTAACATACAGTGACGGCACTTTGTTAACAGTTTGTCGTTCTCGCCATGTGTCTTTAGGACAACGTTGTGTTTCACCTTCATTACGAAGCCTCCCAGGTGGCACACAGCACAACTCTTCACAACAAAACTTCCTCTGTCcttcagtttttttcccccctt

Function

GO:

id name namespace
GO:0007165 signal transduction biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799516.1 True 2250 mRNA 0.45 6 11317430 11328619

Neighbor

gene id symbol gene type direction distance location
LOC120558407 NA coding upstream 505878 10758397 ~ 10811552 (+)
LOC120558406 NA coding upstream 569877 10593784 ~ 10747553 (+)
LOC120559192 NA coding upstream 733901 10574601 ~ 10583529 (+)
LOC120559190 LOC103365742 coding upstream 777078 10530663 ~ 10540352 (+)
magi3a magi3 coding upstream 791096 10326748 ~ 10526334 (+)
rapgef3 LOC103365870 coding downstream 23995 11352614 ~ 11382149 (+)
dazap2 dazap2 coding downstream 170253 11498872 ~ 11503554 (+)
si:ch211-210c8.6 LOC103365959,LOC103139179,LOC106936181,LOC105935261,LOC100690432,LOC102797068,LOC102213155 coding downstream 188025 11516644 ~ 11520131 (+)
LOC120558490 LOC102302598,LOC100690975 coding downstream 203580 11532199 ~ 11563315 (+)
cs cs coding downstream 235496 11564115 ~ 11579004 (+)
G48763 NA non-coding upstream 87064 11230007 ~ 11230366 (+)
G48755 NA non-coding upstream 108796 11208287 ~ 11208634 (+)
G48680 NA non-coding upstream 356948 10907360 ~ 10960482 (+)
G48679 NA non-coding upstream 405358 10910143 ~ 10912072 (+)
G48670 NA non-coding upstream 418298 10855502 ~ 10899132 (+)
G48803 NA non-coding downstream 106425 11435044 ~ 11456874 (+)
G48804 NA non-coding downstream 109653 11438272 ~ 11438557 (+)
G48805 csrnp2 non-coding downstream 130723 11459342 ~ 11459749 (+)
G48806 csrnp2 non-coding downstream 132529 11461148 ~ 11461976 (+)
G48807 NA non-coding downstream 134654 11463273 ~ 11464079 (+)
G48765 NA other upstream 1438 11314662 ~ 11315992 (+)
G48752 NA other upstream 143776 11172595 ~ 11173654 (+)
G48640 NA other upstream 567002 10614031 ~ 10750428 (+)
agmat agmat,LOC102790280 other upstream 1166179 10139598 ~ 10151251 (+)
ubxn10 NA other upstream 1392349 9922600 ~ 9925081 (+)
xkr5l xkr7,LOC103354446,LOC100690518 other downstream 755833 12084452 ~ 12090773 (+)
LOC120559364 cables2,LOC103354454,LOC100695798 other downstream 764160 12092779 ~ 12103899 (+)
nol4la LOC103354513,LOC100696587 other downstream 853590 12182209 ~ 12210409 (+)
trnae-cuc_14 NA other downstream 894948 12223567 ~ 12223638 (+)
LOC120559657 LOC102305201 other downstream 917026 12245645 ~ 12254060 (+)

Expression


Co-expression Network