tnfrsf9a


Basic Information

Item Value
gene id tnfrsf9a
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 12892471 ~ 12896719 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799525.1
CTGAGGCCACAGCACAGACACATTTCTTCCTATGATACCATTCATAACATTACTGCTGAGTGGCTTTAAGTTAAAGTTATTATAGTTTAGATTAAAGCTACaaatttagaaaaacaaaaaaattaagtgCCTTAAAAAATATTCAGTACCTGGGATATTTCTTGGATTGGATTAGCTCACGTTTTACCTGAGGTGGCTGTCATCCTTATCCTCAAGGCTGGAGAGCTGACAACAGTATGGCTGCAATCTTAAGGGCATTGGTTCTCGCTCTGCTCATTCAGGGCTGCTTTTGCAGTGTTGGACAGACTGACACAGGCTGCATGAAATGGACACCAAAAGGAGATCATGTTTGCTGTGAAGCCTGTTTTGCTGGAAACCGCCTGGTCAAAGAATGTGGCCCAAGCCCGAAAGATCTCTGTACTCCTTGTGAGGCCGGGACATTTACGGTGAACCCAAAACAGTACCGCTGTACCAGGTGTACACAGTGTGTAGgtgCTCAAGTCGATGTGAAAGAGTGCACTACCACAACTGACACAAAGTGTGGCTGTACAGAAGGACTCACCTGCGGTAATGACCGCTGTTCCTTCTGTTACAAAAAGTGTGACAAAGGTTATGAACCATATAAACGTGATTGCAAACCATGTCCAGAGGGAACCTTTAATGACCAAAGTCACCAGATGTGTAAACCCTGGAGTACCAAGTGTCCCAATCCAGATCAAAAGATTGCGGCCAAGGGAAATGCACTTATGGACATCAAGTGTGTTAATGTTTCAGTTGCCCCAGTGATCCGTCCAGAGCGACCTGATCCCACAGAGCAGGCATGGCCATTGGTCTTATCTGTGATCACAAGTGCAGTTCTGATGGCCTttagcatcatcatcatcagccttGTGGCCAAGAAATTCTTccagaaaagaaaggaaaaaggcaTAAAGCCAATCACGACCCAGATAATCACAACCCCTACAGATGAGCCAAAGACAGATAATCCTAGGACATTAATAGCCATTGAGTGCAGTTTCCACGAGGCCCAGCAAGAGCAGGGCAGCAGCTCAGAGTCGCTCTACTCCAAGGACTCCTCGAGCCAGCTCATTGCATGAAGAGAAGGGAAACTGGACTTGACTGCGCCGTTGAAGAACCTGCTATATTTGTGTTGAGTTTGGTGAAAGGAAACCGGATATCCTGAATAAGATGGAGTCCCTCTTTGTGATACTGgagatgtttttgttgtggcAATTTGTTTTGGCTCTAAATGAAAGAAACAGAGCACTGTATTCACCCAGCTGTATTTTATCCACCCCATTTTCGTTTTTCAGAATTACCAAAGATACTGAGAAAATCTTTATAGGTCAAGGTAGAGGTATCACTTTGCTGTACAATTACACCAGGATGTAATTATAGCGATGATACAGTAAATGCACACAGGGGAGGAAGGGGAATtctgagagggaaaaaaagtagTGGATTACAACAGTCCATTCATCATGTTAATTTGATCAGACACTGAGGctgttttttcccctttcaGTTAAGCCTAAAAGAAGATAGCTGTGAAAGGTTTGAATTATTGGATTGAGTTtggcaccagatgggaaaaatACCTAAGCCTTTAAACTTGTTTTAACTACTTTCAAACGATTGGACTGGTGCCAATAGCCTGTGTATAATATTGTCGTGTTTGAGTTTCACTCCTCTTATATTTGCATGTCTAAGCGGGAAAGCTGCGGAATGCTGCTGTGTGACTGTACAGTATGGGTGGGTGTTCAGCTGGGTGTAAAGGTCTGACGGCAGAGAGGTCTGAGTCACGCCTAAGGCTGAGCCCACAAATGCCTCCTAGGTATCTACGTTTTACTGCTGAATTTGTACATTTCTAACTGTGGCTGTGTTGCTGTGTCAATCATGATTTTATGTTGTGAAAAATGTATGATTTATCATGGGGACAGATTGCtattttggtttgttatttaaatatttctatAGAACACAGAAGATAACTTTGTTTACAATAGTATATAGTATCACTTTGAAGACAGCGTGGTATAGCCTCTTCGACGCTACTTAACATTACCAGGAACTATATGGACTTTCCAACAATTACTTCATTGGTGTCAAAAAGTCCAGCAGAGGGAGTTCCCTTTTTTGTGAATAGGTAATCAGATATTTAAACTTAAAACACCAAGAaacctacagtacagtacacagtCTGCATATGTAAAGTACCTTGGTGCTATTTTAGCGAGAATGGTTTAGTTGAGGTTTTATTCATGAACAAGCTGAGGCATGCCTGTTGAGCAAGAGTTTGGCAACACAGTGGATATCCCAAGGTCAGTATTTATGATTAAATGTCAGATAATGTGATTAGTCATGTGCTGCACATAGATCTCTGAGATTTCTATTAAGTGCGTCATGTGGGaaatcctctgaataaaaacttAGCAAATATATGAGGCaaacacaatataaaaaaactgAGGCTCAAGGGTTATGTGGAAACCCCCCAGTCAGTCTTGTACTCCTTTTTGCTTTTGGTTATCTTCTAGCACAATGGAGTAGGCAGCTAGATCAGACCAAGTGgaactttttttcttcacaaatgCAGGTCTTTTCTGAACTGTAGCAGGCGTATATCTTTCTACTGAAATGGAACATTTGCTAGCCCACACCTTTAGTACTGTATCAGGGACTATGAGTCACAGCTCACACATTGTGATGTCTGTTGAAAGACCACAAAGTTCACTGGTGCCTTGAAAAGAGGTACCACAGTAGTCATACAGTGAAAAGTAGTAAGGACTGTAGCACTTTACTTGTCAGCTGGTAGGACCAATGTTACGCACTTGTTTGGTTTGTGAATTTATCATTCTGCCTCATATCTATTTTATAAGAT

Function

NR:

description
PREDICTED: tumor necrosis factor receptor superfamily member 9-like isoform X1

GO:

id name namespace
GO:0031667 response to nutrient levels biological_process
GO:0009991 response to extracellular stimulus biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799525.1 True 2884 mRNA 0.42 7 12892471 12896719

Neighbor

gene id symbol gene type direction distance location
LOC120559133 mxra8 coding upstream 33079 12848812 ~ 12859392 (+)
aurkaip1 aurkaip1,LOC102776880 coding upstream 44496 12845618 ~ 12847975 (+)
nt5dc2 nt5dc2,LOC102799881 coding upstream 113230 12768809 ~ 12779241 (+)
zgc:162200 LOC103354841 coding upstream 126431 12744560 ~ 12766040 (+)
LOC120559796 LOC104924663,LOC103354782 coding upstream 169875 12708643 ~ 12722596 (+)
LOC120558505 LOC103354934,LOC104924675 coding downstream 15057 12911776 ~ 12920803 (+)
dnajc11a dnajc11,LOC104924676,LOC100696684,LOC102780517 coding downstream 326274 13222993 ~ 13235009 (+)
LOC120558583 NA coding downstream 340751 13237470 ~ 13243293 (+)
LOC120558998 LOC104924681,LOC104961357 coding downstream 359128 13255847 ~ 13259321 (+)
lemd1 NA coding downstream 375847 13272566 ~ 13284251 (+)
G49330 NA non-coding upstream 51906 12828581 ~ 12840565 (+)
G49314 NA non-coding upstream 108683 12780615 ~ 12783788 (+)
LOC120559802 NA non-coding upstream 160054 12726600 ~ 12732417 (+)
G49301 gpr173,LOC107086794,LOC102204197,LOC101466594,LOC108231911 non-coding upstream 214793 12674342 ~ 12677678 (+)
G49241 LOC101072313 non-coding upstream 231100 12660427 ~ 12661371 (+)
G49334 NA non-coding downstream 24286 12921005 ~ 12928180 (+)
G49346 NA non-coding downstream 31537 12928256 ~ 12928471 (+)
G49461 NA non-coding downstream 410121 13306840 ~ 13307572 (+)
G49474 NA non-coding downstream 469012 13365731 ~ 13378409 (+)
G49502 NA non-coding downstream 535880 13432599 ~ 13433217 (+)
LOC120559134 dvl1 other upstream 6247 12860721 ~ 12886224 (+)
LOC120559236 LOC103354867 other upstream 48037 12794943 ~ 12844434 (+)
LOC120558314 porcn other upstream 234163 12652384 ~ 12658308 (+)
G49209 NA other upstream 434032 12452535 ~ 12458439 (+)
si:dkey-70p6.1 LOC100692404,LOC101477341 other upstream 589068 12283427 ~ 12303403 (+)
G49538 lmod3 other downstream 635671 13532390 ~ 13534922 (+)
LOC120558697 LOC103355228,LOC101470284,LOC102288766,LOC101062828,LOC100700879,LOC102197182,LOC102790759 other downstream 762013 13658732 ~ 13724990 (+)
hmga1a hmga1,LOC103355299 other downstream 1216296 14113015 ~ 14121022 (+)
uhrf1bp1 uhrf1bp1 other downstream 1308878 14205597 ~ 14227888 (+)
G49773 LOC103358639 other downstream 1668148 14564867 ~ 14567456 (+)

Expression


Co-expression Network