LOC120558523


Basic Information

Item Value
gene id LOC120558523
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 2645892 ~ 2647467 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799556.1
ATGGAAACAGAAGaggccagagaacctcagtcagctttaaactctctgaaacatgatttaACATGTAacaaaacattcagctgctctgagtgtgggaaaagatttggcTTCAAGTCACATCTGAAGAACCACATGAGatctcacacaggagaaaagcctttcagctgctctgagtgtggtagAGCTTTCACTGAAAGGGGACACCTGAAgacacacatgagaatccacacaggagagaaaccttttaGCTGTTCAGTTTGTAATAAATATTTTACCCTGAATGAaaatttacagaaacacatgagaatccacacaggagagaaaccttttagctgctcagtttgtaataaatattttacactgaatgaaaatttacagaaacacatgagaatccacacaggagaaaaacttttcagctgctcagtctgtaagaaatattttacacagagaggacatttacaacaacacatgagaatccacacaggagagaagccttttagctgctctgagtgtggtaaaGCTTTCACTGATCGTGGAACCCTGAAGAaccacatgagaactcacacaggagagaaaccttttagctgctcagtctgtaagaaatcctttacacagagaggaaatttacaaaaacacatgAGGATCCACACCGGAGAcaaaagattcagctgcagGCTGAAAGCTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799556.1 True 687 mRNA 0.40 2 2645892 2647467

Neighbor

gene id symbol gene type direction distance location
LOC120558519 NA coding upstream 95168 2548939 ~ 2550724 (+)
LOC120559387 NA coding upstream 225034 2413571 ~ 2420858 (+)
LOC120558473 LOC103372586 coding upstream 1037447 1568295 ~ 1608445 (+)
adrm1 NA coding upstream 1592882 1048972 ~ 1053010 (+)
LOC120558589 LOC103356004 coding upstream 1600653 1015388 ~ 1045239 (+)
LOC120559413 NA coding downstream 14105 2661572 ~ 2662342 (+)
LOC120558526 NA coding downstream 106046 2753513 ~ 2757047 (+)
LOC120558536 NA coding downstream 177790 2825257 ~ 2826712 (+)
LOC120559389 NA coding downstream 530830 3178297 ~ 3185180 (+)
LOC120559447 lactbl1,LOC103362248,LOC100707689,LOC101473793,LOC102312186 coding downstream 1078494 3725961 ~ 3734391 (+)
LOC120559425 NA non-coding upstream 138 2637964 ~ 2645754 (+)
G46564 NA non-coding upstream 41637 2603198 ~ 2604255 (+)
G46558 NA non-coding upstream 79577 2565724 ~ 2566315 (+)
G46523 NA non-coding upstream 298335 2344461 ~ 2347557 (+)
G46511 NA non-coding upstream 323863 2321337 ~ 2322029 (+)
G46577 NA non-coding downstream 16439 2663906 ~ 2861822 (+)
LOC120559439 NA non-coding downstream 208090 2855557 ~ 2856180 (+)
LOC120559432 NA non-coding downstream 231695 2879162 ~ 2879742 (+)
LOC120559417 NA non-coding downstream 327387 2974854 ~ 2975570 (+)
LOC120559422 NA non-coding downstream 329149 2976616 ~ 2977694 (+)
G46530 NA other upstream 255380 2389946 ~ 2390512 (+)
LOC120558501 NA other upstream 306463 2337336 ~ 2339429 (+)
LOC120559409 NA other upstream 413233 2205341 ~ 2232659 (+)
G46328 NA other upstream 1007722 1635948 ~ 1638170 (+)
G46305 NA other upstream 1122661 1522685 ~ 1523231 (+)
G46574 NA other downstream 98431 2745898 ~ 2770453 (+)
LOC120559392 NA other downstream 499014 3146481 ~ 3288089 (+)
LOC120559414 NA other downstream 631894 3279361 ~ 3304637 (+)
LOC120559404 NA other downstream 800637 3448104 ~ 3514758 (+)
gpr173 LOC104932793,LOC101475032,LOC100694027,LOC104957049 other downstream 1195597 3843064 ~ 3865798 (+)

Expression


Co-expression Network