LOC120558526


Basic Information

Item Value
gene id LOC120558526
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 2753513 ~ 2757047 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799557.1
ATGCACCAACAGCTATTGATGAACAGggagaccagagaacctcagtcagctttaaactctctgaaacatgattcaacatgtaagaaaacattcagctgctctgagtgtgggaaaagatttggcTTCAAGTCCCATCTGAAGAAACATATTAGAACTCACACAGGAAAACCTTTCAGTtgctcagtttgtaagaaatattttaaacagagtggagatttacagaaacacacgagaatccacacaggagagaagcctttcagctgctctgagtgtggaaAAAGGTTTTGCTACAAGACACATCTGAAGACACACAtgataactcacacaggagagaaaccttttagctgctcggtctgtaagaaatcttttacagaGAGAAGAAGTGTAAAgacacacatgagaatccacacaggagagaaaccttttaTTTGCTCTGAGTGTGGAAAAAGATTTAACCACAACTCAAATCTGAAGAACCACTTGATAACTCATACAggtgaaaaacctttcagctgctcagtttgtgaTCAAAGATTTGGCCGCAAGCAACATCTGCAGACACACATGATAACTcatacaggagaaaaacctttcagctgctcattctgtaagaaatcttttacgcAGAGTGGAAGTGTAAAggcacacatgagaatccacacaggacaTAAACCTTTTATTTGCTCCGAGTGTGGAAAAAGATTTTGCTACAAGTATCATCTGAAGACTCACATGATGACTcatacaggagagaaacctttcagctgctctgtctgtaagaaatcttttacacagagtagCCATTTAAAATATCACATGAAACAACACACAGGAGAGGAACCGTCTACTTCCTGGGTTAGTGACATCAGAAAGCAGCAGGAGTggagctccagtgtggaccagcagcaGCCAGAGAATCTCAGCCAGGTTGGAACTCTCtgaactatagaaataaaatggatagaaaggccatttacATTCAATCAACGTAGCATAATGGTCAGAGTGGcagccatttttatgtgtaccATTGCTGATAGGTTGCATATTTCAGCATTCaggttttcaaatgtatttcatatCTTGTATGTAGGGTACCACACaaggttagtctggggacaaccttcacccaCAGGAATAGATTGgaatgtgtgaatctattaggagcatcggcaataaaaggtgtagtttaaAGTAACTGTTCCACTGAAATAGATAGCCTGGATTGTGTGAGGACAAAAAGTATAAAGGAGTTATTTTgaggtttgtttaaaaaaacactatgGGTACATGCTCTTAGGAGTGTGTACACATGGTTATCTCCCTTTCTCGGCGAGAAACCTTGGCATATACATTTGGTGCATGTCAACGGTTCTCCCTTTCATAAAAGTTTGTTTGGTTGTTGtgtgaataaagctgcattagtCTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799557.1 True 1431 mRNA 0.40 2 2753513 2757047

Neighbor

gene id symbol gene type direction distance location
LOC120559413 NA coding upstream 91171 2661572 ~ 2662342 (+)
LOC120558523 NA coding upstream 106046 2645892 ~ 2647467 (+)
LOC120558519 NA coding upstream 202789 2548939 ~ 2550724 (+)
LOC120559387 NA coding upstream 332655 2413571 ~ 2420858 (+)
LOC120558473 LOC103372586 coding upstream 1145068 1568295 ~ 1608445 (+)
LOC120558536 NA coding downstream 68210 2825257 ~ 2826712 (+)
LOC120559389 NA coding downstream 421250 3178297 ~ 3185180 (+)
LOC120559447 lactbl1,LOC103362248,LOC100707689,LOC101473793,LOC102312186 coding downstream 968914 3725961 ~ 3734391 (+)
LOC120558400 NA coding downstream 1201509 3958556 ~ 3982281 (+)
LOC120558402 LOC103357835,LOC104954328 coding downstream 1248218 4005265 ~ 4014601 (+)
LOC120559425 NA non-coding upstream 107759 2637964 ~ 2645754 (+)
G46564 NA non-coding upstream 149258 2603198 ~ 2604255 (+)
G46558 NA non-coding upstream 187198 2565724 ~ 2566315 (+)
G46523 NA non-coding upstream 405956 2344461 ~ 2347557 (+)
G46511 NA non-coding upstream 431484 2321337 ~ 2322029 (+)
LOC120559439 NA non-coding downstream 98510 2855557 ~ 2856180 (+)
LOC120559432 NA non-coding downstream 122115 2879162 ~ 2879742 (+)
LOC120559417 NA non-coding downstream 217807 2974854 ~ 2975570 (+)
LOC120559422 NA non-coding downstream 219569 2976616 ~ 2977694 (+)
LOC120559441 NA non-coding downstream 261764 3018811 ~ 3035935 (+)
G46530 NA other upstream 363001 2389946 ~ 2390512 (+)
LOC120558501 NA other upstream 414084 2337336 ~ 2339429 (+)
LOC120559409 NA other upstream 520854 2205341 ~ 2232659 (+)
G46328 NA other upstream 1115343 1635948 ~ 1638170 (+)
G46305 NA other upstream 1230282 1522685 ~ 1523231 (+)
LOC120559392 NA other downstream 389434 3146481 ~ 3288089 (+)
LOC120559414 NA other downstream 522314 3279361 ~ 3304637 (+)
LOC120559404 NA other downstream 691057 3448104 ~ 3514758 (+)
gpr173 LOC104932793,LOC101475032,LOC100694027,LOC104957049 other downstream 1086017 3843064 ~ 3865798 (+)
LOC120559501 NA other downstream 2015885 4772932 ~ 4775358 (+)

Expression


Co-expression Network