LOC120558536


Basic Information

Item Value
gene id LOC120558536
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 2825257 ~ 2826712 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799572.1
AtgtcagtcagaagcagaaaacggagaggaggagagggacccaAACGTCACCACTGTCAGCACTGTGACACATCCTTCAAATcatctggatatttaaagattcatcagagagttcatACTGGAGATAATctacacagctgtgatcaatgtggggcagctttcacactacAGTGTGACCTAAAAATACATcaatgcattcacactggagagaagccgtacagctgtgatcaatgtgggacaGCTTTCAAACAACAGAGTCACCTAAAAAGAcatcaacacattcacactggagaaaagCCGTACAGATTTGATCAATGCAGCGCAGCTTTCGCAGTACAGAGTACCCTAAAAAcccatcaacgcattcacactggagagaagccgtacagatGTGATCAATGCGGGGCAGCTTTCGCAGTACAGAGTGCCCTAAAAACCCATCAACGTattcacactggagaaaagccttacagctgtgatcaatgtggggcagctttcgcACGACAAAGTAACCTAAAAAACCATctacgcattcacactggagagaagccatacagctgtgatcaatgtggggcagctttcacacaacaggAATACCTTAAAgtacatcaacgcattcacactggagagaagccgtactggtgtgaacaatgtgggaaaaccttttctcagagtACTCACCTTGTAAGCCACcaacgtgttcacactggagagaagccgtactggtgtgaacaatgtgggaaaactttttctcagagTGGTCACCTTAAAAGACACCAGAACATTCACACTGCCTCATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799572.1 True 801 mRNA 0.45 2 2825257 2826712

Neighbor

gene id symbol gene type direction distance location
LOC120558526 NA coding upstream 68210 2753513 ~ 2757047 (+)
LOC120559413 NA coding upstream 162915 2661572 ~ 2662342 (+)
LOC120558523 NA coding upstream 177790 2645892 ~ 2647467 (+)
LOC120558519 NA coding upstream 274533 2548939 ~ 2550724 (+)
LOC120559387 NA coding upstream 404399 2413571 ~ 2420858 (+)
LOC120559389 NA coding downstream 351585 3178297 ~ 3185180 (+)
LOC120559447 lactbl1,LOC103362248,LOC100707689,LOC101473793,LOC102312186 coding downstream 899249 3725961 ~ 3734391 (+)
LOC120558400 NA coding downstream 1131844 3958556 ~ 3982281 (+)
LOC120558402 LOC103357835,LOC104954328 coding downstream 1178553 4005265 ~ 4014601 (+)
mfn2 mfn2 coding downstream 1203811 4030523 ~ 4059713 (+)
LOC120559425 NA non-coding upstream 179503 2637964 ~ 2645754 (+)
G46564 NA non-coding upstream 221002 2603198 ~ 2604255 (+)
G46558 NA non-coding upstream 258942 2565724 ~ 2566315 (+)
G46523 NA non-coding upstream 477700 2344461 ~ 2347557 (+)
G46511 NA non-coding upstream 503228 2321337 ~ 2322029 (+)
LOC120559439 NA non-coding downstream 28845 2855557 ~ 2856180 (+)
LOC120559432 NA non-coding downstream 52450 2879162 ~ 2879742 (+)
LOC120559417 NA non-coding downstream 148142 2974854 ~ 2975570 (+)
LOC120559422 NA non-coding downstream 149904 2976616 ~ 2977694 (+)
LOC120559441 NA non-coding downstream 192099 3018811 ~ 3035935 (+)
G46574 NA other upstream 54804 2745898 ~ 2770453 (+)
G46530 NA other upstream 434745 2389946 ~ 2390512 (+)
LOC120558501 NA other upstream 485828 2337336 ~ 2339429 (+)
LOC120559409 NA other upstream 592598 2205341 ~ 2232659 (+)
G46328 NA other upstream 1187087 1635948 ~ 1638170 (+)
LOC120559392 NA other downstream 319769 3146481 ~ 3288089 (+)
LOC120559414 NA other downstream 452649 3279361 ~ 3304637 (+)
LOC120559404 NA other downstream 621392 3448104 ~ 3514758 (+)
gpr173 LOC104932793,LOC101475032,LOC100694027,LOC104957049 other downstream 1016352 3843064 ~ 3865798 (+)
LOC120559501 NA other downstream 1946220 4772932 ~ 4775358 (+)

Expression


Co-expression Network