zgc:158263 (LOC104932850,LOC104967525,LOC101474144,LOC102796628)


Basic Information

Item Value
gene id zgc:158263
gene name LOC104932850,LOC104967525,LOC101474144,LOC102796628
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 22110987 ~ 22119609 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799730.1
TGTCAGGCTGTGCCGTCAATATTTTACAGGAATGATGGCATACATTTCTCTTGAAAAAAATATCTTCAGATTATTTCAGAGGAGATGAAAACTTTCCCAAGGACTTTGGTGTGTTGTTGACTGATGGAAAGATGAGATTGCCAACCTGCTGCTATTTGTCAGAGATGCAAAAGTTATGGCTGTAAAATTGATCATAAAAGTTTTCCGAGACACGGGAAAGAGCGACGCTGTGGCTAAAAAGCGCTTTTCCAGATGGAGACAGAAGTGAGGCTGGAGTCGAGTTTGTGGGTCGGGATTAAAAGATACCGGGCGGTCCTATCGGGCTGGCATTTCAACTGGACCGAGGTAGATAAGAAGAATCGCGACAAGAAAACAATTTCAGTACCTGTGGCAGAGGTGGTTGGAGTGGAGGAGGGCCGGGTGGAGATCCTGCCCCAGAAGTCAGTCGAGGACACAGACAAAGACTTCACAGTTTTCTACGTGAAGCGCATCAGCAGTGGGAGTTCTTGTGGGTTACTATGGAGACTTGGCCGGATCCAGTTCAGTTGCCCCAGTCGGGTGCTCAGAGACCAGTGGACGAAACACCTTAGAACGGCTCTCAAAACTCACAGTCCGCTGCGTCCCAACAGGCTTTTGGTGTTTATCAACCCATttggagggaagaagaaaggaagaaagatcTACCATTCTCTGGTTGCCCCTTTGTTTGAACTGGCTGGTATCAGCTCTCATGTAGTAGTGACTGAGCGGGCAAACCAGGCCAGAGACCACCTCCTGAAAAAAGACCTGACAGGCTTTGATGGtgtggtgtgtgtgggtggggatgGCATGTTCAGCGAAATACTTCATGGTTTGATTGGGCGGACACAACAAGAGGCAGGCCTTTCTGAGAATGATCCCACTGTCGCTTTACAGCCTTGTCCGCTTCATATTGGCATCATTCCGGCAGGTTccacagactgtgtgtgttatGCCACAGTGGGAGTGATCGACGCTGTTACTTCAGCTTTGCACATCATCATTGGAGACTCTCAGCCATTAGATGTATGTTCAGTCCATCAGGCTTCTGCTCTGATGCGCTACTCAGTGTCTCTGTTGGGCTATGGCTTCTACGGTGACGTACTGGCTGAGAGTGAGAAACATCGGTGGATGGGACCTCTCCGATACGACTATTCAGGCACCATGGTGTACCTGAGCAACAGAAGCTATGCAGGCATAGTTCAGTATCTACCAGCAGACCCGCTGCTCTCCAGCCCGAGAGATAGAACACGCTGCCTCTCAGGgtGCAGCGTGTGCTCCAGAAGCACAGAGAGACTTTTCCGCCACTCTTCAGAATCGGGCTCCTTGTACAGCTCCCACTTCAGCCAGTTCAGTAGTGACTCAGAAGGCGAGTGGGTGAGTGTGGAGGGCAGGTTCAGATGTGTGTCTCTCACTTGCATGTCCAGCTCGTGTCCTAAGAGTCCTCTGggcctctctccctctgctcacCTGGCAGACGGAACAGGAGACCTAATCCTGGTATGGGACACTCACCCGCTGGGATTCCTCAAGTTCCTCTACaggcacacaagcacagaggATCAGTTTGACCTGCCATTTGTGGAGGTCCATCGTGTGAAGGCAGTCCGGTTCTCTCTCCCCTCCGGTAAAGAGGAGGAAGTATATAAAGAGACTGGAGGGTTGAGAGAAGGGATAGATGAAGAAGAGAGAGGCTACATTGAGACTGTAAGCAGGAATGGATCTCAGCAGCACctggcagagagagacacaggacaAGAAATGACAAATGAGCAGAAAATGGCGACCCCATTCCTGTGTGGTCTGTGCTGCAGTAAAGCTCCTGCTAAGTCAGTGTGGAACTGTGACGGAGAGATTCTGTCTTCCACCGAGATTCTCTGTAGGATTCATGGCCAGCTGGTGCGTCTGTATGCAAGGGGCATCGAGGACGGAGCAGCCATGCACAACTGCGGCAAAGAAAATGACAATTGTCAAATGGGATGTACCCTAAACAAATAGTCTCACCTAAATTTTGGATGATGAGGGAAAGGTGACAATGGAAATGTTGGCAAGGCGAATTTTTGAATTTACTGAGATAGCCCTGCAGTCTGTCATGGCCAAAGAGTTCCTATTTCAGATGCATAACATGTTTTCTCAttgtaataatgaaaaaaactgtatattCCTAAATGAGTGTGTTTATTGAATACTACTTAAAACACCTTTGCTAAATTATAAGTTATCTGTAGTGCAGGTCTTTCTGGTATTTCTCAGTATACAGTGTTTGTCTGCAATTTCTGGTCTTCAAATTTGAGttattttcattttagcttCTAGGAAATGAAAACATGGGGAATGTCAACAGAAgttaaaagacacaaaacatcTTGAGGCAATAAAAAGAATGACCTGACCTCC

Function

NR:

description
ceramide kinase-like isoform X1

GO:

id name namespace
GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway biological_process
GO:0016310 phosphorylation biological_process
GO:0003951 NAD+ kinase activity molecular_function
GO:0004143 diacylglycerol kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799730.1 True 2415 mRNA 0.48 13 22110987 22119609

Neighbor

gene id symbol gene type direction distance location
idh3g idh3g coding upstream 82693 22022834 ~ 22028294 (+)
ribc1 NA coding upstream 283097 21823518 ~ 21827890 (+)
tmem9 tmem9,LOC107707676,LOC106572715,LOC107669678 coding upstream 330037 21776471 ~ 21780950 (+)
zgc:153867 LOC107390870,LOC103467339,LOC102296328,LOC104956861,LOC105928965,LOC106950810,LOC106525009,LOC101167617,LOC102221965,LOC100708807,LOC101480989 coding upstream 364270 21737480 ~ 21746717 (+)
c1galt1a LOC104956867 coding upstream 490786 21607339 ~ 21620201 (+)
cacnb3b LOC103363728,LOC104967530,LOC100705687,LOC101472360 coding downstream 64687 22184296 ~ 22199110 (+)
rnd1b LOC101472065,LOC103358261,LOC100705424,LOC104932892,LOC103384592 coding downstream 83482 22203091 ~ 22213864 (+)
ptges3a LOC107390842,LOC103368333,LOC104967534,LOC100704884,LOC106525288,LOC108244561,LOC101471106 coding downstream 120873 22240482 ~ 22244763 (+)
mipa LOC103368323,LOC101065051,LOC100704616 coding downstream 127346 22246955 ~ 22248730 (+)
LOC120558509 NA coding downstream 268940 22388549 ~ 22397004 (+)
G52031 naa10 non-coding upstream 4042 22105645 ~ 22106945 (+)
LOC120558642 NA non-coding upstream 24754 22085266 ~ 22086233 (+)
G52006 NA non-coding upstream 79468 22031209 ~ 22031519 (+)
G51935 NA non-coding upstream 196150 21914325 ~ 21914837 (+)
G51927 NA non-coding upstream 204739 21905055 ~ 21906248 (+)
LOC120558498 NA non-coding downstream 53535 22173144 ~ 22176411 (+)
G52060 LOC104967533,LOC103368342 non-coding downstream 115547 22235156 ~ 22237182 (+)
G52064 NA non-coding downstream 134686 22254295 ~ 22254973 (+)
G52054 NA non-coding downstream 220774 22340383 ~ 22346646 (+)
G52179 NA non-coding downstream 354621 22474230 ~ 22476314 (+)
LOC120558641 LOC103363734,LOC104967523 other upstream 16097 22090197 ~ 22094890 (+)
avpr2aa avpr2,LOC105897269 other upstream 50342 22046763 ~ 22060645 (+)
G51926 NA other upstream 206910 21903542 ~ 21904077 (+)
LOC120559721 cacna1s,LOC103368470 other upstream 303073 21783217 ~ 21807914 (+)
birc5b LOC107086758,LOC102206178,LOC102295711,LOC100709346,LOC106950807,LOC103141143,LOC106920826 other upstream 390864 21717109 ~ 21720123 (+)
G52210 LOC104964406,LOC106525460,LOC105931770 other downstream 436720 22556329 ~ 22560328 (+)
LOC120559933 NA other downstream 442545 22562154 ~ 22562521 (+)
lamtor5 lamtor5,LOC102787529 other downstream 722435 22842044 ~ 22846938 (+)
atxn7l2b kcnc4 other downstream 871643 22991252 ~ 23068479 (+)
tmem201 tmem201,LOC102777799 other downstream 1626756 23746365 ~ 23765165 (+)

Expression


Co-expression Network