tmem269 (LOC103365731,LOC102791044,LOC104928629,LOC100689985,LOC100710458,LOC108237576,LOC101473555)
Chromosome Information
Item |
Value |
chromosome id |
NC_053116.1 |
NCBI id |
CM020913.1
|
chromosome length |
44101041 |
location |
10303395 ~ 10316636 (+) |
genome version |
GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
Sequence
>XM_039799834.1
GTGGAATATTCCAGCGGATCTATCCTTGGTCTTTAAAAGGACGCGCTGAAAACGCTGCTGTGATATTGACAGGTAAACGGCCATATATTCTGTATATGCAGTTGAGAGCGTAGCCACTTTACATACCCCAGTCAGCTAAGAGAAACAGATACATCCGcgtacaaaaaaagaaaaggaaagaaaaggaaagaaagacatTAAGGTCCAGTACGTGCATCTTTAGACGTCTGCGTCATTGGATTTGTCTAGACTTTGTAATCTTTTGGAGGTCCTTTCAGCTGATGTTCTTTGACCCAGAGACAATCATGATCCTCCTGACTCCCTCTTCTGGTCTCTTCCGGTGTACCAACAAGCTCTTTCTGAGTGATGAAGCCACCGGACTCCAGATCAAGGAGTTTGCACGTAAAAATGCAGCTAATGCTCTTTCAATGTGCAACATGGTCATGGGCATGGCCTCCATTCTCAGCAGTCTAAATGGGCACCATCATGCTGCATGTTGGCTGGTTCTGATTGGCTACCTGCTGGATTTGGCAGATGGAGCAGTTGCCAGGCGACTCGGTGCCTGTTCTGCACTGGGTGCAAAGCTCGATGATTTTGCTGACTTCACGACATTCGGGATTGCCACGTCATTGCTCCTAAGGACGACCGACCTGATGGACAACATCCTGTGCGTGTGTTACgtcttgtctgtgtttgtccgCCTCTGTTTCTTCACGAGCGGGATCCCATTCATGTACCGCGGCCTGCCCTGCATCTACTCCTCAGGCATCCTGGCCagtgtctctctgctgtctggGGGGAACCTGGTCGTGCTGCGGGTCATTGCGGCAGCCATGATCTTCTTCATGATCAGCCAGAGCTTCTACCCCCATGACAAAGTGCTGGAGTCCCAGGCCTGGAAGAAAGTTGTCTATGCTGGAGgaGTCATCATGGTGTTTTGCTCTTCCTTCCCCCCTGCATGTGTCTACTACCTGCTGTGGTCAGTCTCCTACATTTTGTTCCCAACATCCCTTTGGAGCAGTAAAGTGTAAAATGGGTATTGGCTTTATCCAAAACTCCCATATAGGTTTACCTCTGGCCCACCCGGGTGAACTGAGGCTTCCAGACTGCTGCTGCTCCCTACTGCCATGGAGGATCCAAGCTGAACATGCTCATGCTCCACAGGCAAATCACTCGCTCTATTTGACCTTTTTATTTTGACGCAACACCTCTAAAACAAAACCCAGATTGAAGAGAGTTAGAGTGAGGGATAAGAATGAGATTTTAATGTCGCTGGTAAGGACTAACCTTCATGCTGTCTTGTGTCTTTGTTGCATTTTCACTGAAACCGGGAGTTGGATGGCTTGTtccatgatttttttattttttttaatcaggtttATCTCCTGTGGAATCCCCCTACTTCAATATTAATCTTTCATCAATGTTGTGAACACGCAGCAGCAGTCGATATAAAAAAGCAATTATTTCAAATTTAAATAAGCACACAAATTTCTAATATACTTTGGCCTCAAATTTGggttttttaaatatgtttaattGTGTAATCACACTGGATCGTAACTCTTATTATGATGTCCACAGTGTTGAGCATAGCCTAATGAGTAACTGTTTTAGTGCTACAGTATGTAGGAAGCGCCTTTAATCAATGAATATACAACATGATTTCTGAGCAGCATTTTCGAGGTTCAAAATTCCAAGTTCTTTCGGGTTTATCTATAACACAGTAATGGGAATTCGTAAAGGCACTATGACCATGTCTTGTGTTAACTGACTGTCTGTTAACTGACTGTCTGTTAATGTTTGTATCCGGGTTGAGGTCACTTCACTTTCATAGTGTTCAGAGTgggaaatttactttttttccattttgtagGCGTCTCAAATCCAGTGAATATTTGTAAGAAGCTTTCATTTCAATTATTAGATTTGCTGTTTTATAAATAAGTTCAGTTGAAAGTCAGCTGACCACAACTCTGGCATCTGTGAATGTGGAGACTTTCAGACTTTTTACAAAGTTGTGGCTCTGTCCAATAAATGATGTGTTAGATTTCCATATTTCTTCTAAGTGTGTTCTTATTTGCTAATTGTATGTGTTTACCTCTGTTTTAAGAGGCATTGCAGTTTTAATAGTAAATCCACACTGGATCACATAAACATCTCGTAGTACTGCTCTGGCCACAGCTCAATCGGTAACATCAGTGATTTTTAGGTGGAGTCAGGAATGCAACATGAGTGGGCGGCGCCGCCCATAAATGGCAAAGCAGCAGCAGGTTTCTGCCTTGTCATTCAGTGTGAATTTACCCTTAAAGAGCAACAACACGCAGGCTGCGAATTCTGCTTTTTCCTCACCACGCTGCAAGTTTTGCCTCCACCTTAAAGGTGTTGTAACATTGCACTATAGTCCATGTTGGCTGTGCTCACAAATGCACCAAACCACTACTAGTGGTGGAGCAGCATGGAAACATTAAACCCACAAGGAAGGAGAGTTTAAGTGTGTTGTTAATCTTTAACTTGGCCGGCATTCAGTCAGGGGgacatcattattttttttttttgtagactgtgtttcacaatgtgtgtatttgcgCCTCTCTGCATCGTGTGTGGCAAATGGGGAGATTATACAGTATGCCCATGTTTAAATTTGGACTCTGGAGCTTGTAATCGGAGGTGTCGAAATAAATGGTATGACATCACTCACCATTTTAGTtcagtgtttttaatgttaattGTAATGATTTGGAACCCTCTTACAAGCAATATCAGAGCCCGAAGAAGGAAAACCTAAAGCAGAGTTTCAAGAAAACGAAGACCCGAGGTGTCCGTCTTCAGGTTCTGATATTGGTCTGAACCCACTGGGGTTCTTGACATGGTTACAGtaaccaatgttgtaaagaaaatcCACAGTGAAAAGTGCACACACAAGACTAAACACAAATCTACTCTATTACATTCAGCTTTCCTGTGTGGGTGTTTTGGTTTTCAAACTGTGAAGTCACAGTGATGTATGCATGCCTAGAGCATTACAGATACAAAAACTGTACTTtgcccaataaaaaaaaaaaaaaagatcttaatGATAAGATCtgtgcttttacttttactgtCTGTACATTTTTGACAATAAAGAGGCAATAATGAAATGAC
>XM_039799835.1
GTCAACGATAACCATTGGTAACGTCATCTCCGGTGGAATATTCCAGCGGATCTATCCTTGGTCTTTAAAAGGACGCGCTGAAAACGCTGCTGTGATATTGACAGCTGATGTTCTTTGACCCAGAGACAATCATGATCCTCCTGACTCCCTCTTCTGGTCTCTTCCGGTGTACCAACAAGCTCTTTCTGAGTGATGAAGCCACCGGACTCCAGATCAAGGAGTTTGCACGTAAAAATGCAGCTAATGCTCTTTCAATGTGCAACATGGTCATGGGCATGGCCTCCATTCTCAGCAGTCTAAATGGGCACCATCATGCTGCATGTTGGCTGGTTCTGATTGGCTACCTGCTGGATTTGGCAGATGGAGCAGTTGCCAGGCGACTCGGTGCCTGTTCTGCACTGGGTGCAAAGCTCGATGATTTTGCTGACTTCACGACATTCGGGATTGCCACGTCATTGCTCCTAAGGACGACCGACCTGATGGACAACATCCTGTGCGTGTGTTACgtcttgtctgtgtttgtccgCCTCTGTTTCTTCACGAGCGGGATCCCATTCATGTACCGCGGCCTGCCCTGCATCTACTCCTCAGGCATCCTGGCCagtgtctctctgctgtctggGGGGAACCTGGTCGTGCTGCGGGTCATTGCGGCAGCCATGATCTTCTTCATGATCAGCCAGAGCTTCTACCCCCATGACAAAGTGCTGGAGTCCCAGGCCTGGAAGAAAGTTGTCTATGCTGGAGgaGTCATCATGGTGTTTTGCTCTTCCTTCCCCCCTGCATGTGTCTACTACCTGCTGTGGTCAGTCTCCTACATTTTGTTCCCAACATCCCTTTGGAGCAGTAAAGTGTAAAATGGGTATTGGCTTTATCCAAAACTCCCATATAGGTTTACCTCTGGCCCACCCGGGTGAACTGAGGCTTCCAGACTGCTGCTGCTCCCTACTGCCATGGAGGATCCAAGCTGAACATGCTCATGCTCCACAGGCAAATCACTCGCTCTATTTGACCTTTTTATTTTGACGCAACACCTCTAAAACAAAACCCAGATTGAAGAGAGTTAGAGTGAGGGATAAGAATGAGATTTTAATGTCGCTGGTAAGGACTAACCTTCATGCTGTCTTGTGTCTTTGTTGCATTTTCACTGAAACCGGGAGTTGGATGGCTTGTtccatgatttttttattttttttaatcaggtttATCTCCTGTGGAATCCCCCTACTTCAATATTAATCTTTCATCAATGTTGTGAACACGCAGCAGCAGTCGATATAAAAAAGCAATTATTTCAAATTTAAATAAGCACACAAATTTCTAATATACTTTGGCCTCAAATTTGggttttttaaatatgtttaattGTGTAATCACACTGGATCGTAACTCTTATTATGATGTCCACAGTGTTGAGCATAGCCTAATGAGTAACTGTTTTAGTGCTACAGTATGTAGGAAGCGCCTTTAATCAATGAATATACAACATGATTTCTGAGCAGCATTTTCGAGGTTCAAAATTCCAAGTTCTTTCGGGTTTATCTATAACACAGTAATGGGAATTCGTAAAGGCACTATGACCATGTCTTGTGTTAACTGACTGTCTGTTAACTGACTGTCTGTTAATGTTTGTATCCGGGTTGAGGTCACTTCACTTTCATAGTGTTCAGAGTgggaaatttactttttttccattttgtagGCGTCTCAAATCCAGTGAATATTTGTAAGAAGCTTTCATTTCAATTATTAGATTTGCTGTTTTATAAATAAGTTCAGTTGAAAGTCAGCTGACCACAACTCTGGCATCTGTGAATGTGGAGACTTTCAGACTTTTTACAAAGTTGTGGCTCTGTCCAATAAATGATGTGTTAGATTTCCATATTTCTTCTAAGTGTGTTCTTATTTGCTAATTGTATGTGTTTACCTCTGTTTTAAGAGGCATTGCAGTTTTAATAGTAAATCCACACTGGATCACATAAACATCTCGTAGTACTGCTCTGGCCACAGCTCAATCGGTAACATCAGTGATTTTTAGGTGGAGTCAGGAATGCAACATGAGTGGGCGGCGCCGCCCATAAATGGCAAAGCAGCAGCAGGTTTCTGCCTTGTCATTCAGTGTGAATTTACCCTTAAAGAGCAACAACACGCAGGCTGCGAATTCTGCTTTTTCCTCACCACGCTGCAAGTTTTGCCTCCACCTTAAAGGTGTTGTAACATTGCACTATAGTCCATGTTGGCTGTGCTCACAAATGCACCAAACCACTACTAGTGGTGGAGCAGCATGGAAACATTAAACCCACAAGGAAGGAGAGTTTAAGTGTGTTGTTAATCTTTAACTTGGCCGGCATTCAGTCAGGGGgacatcattattttttttttttgtagactgtgtttcacaatgtgtgtatttgcgCCTCTCTGCATCGTGTGTGGCAAATGGGGAGATTATACAGTATGCCCATGTTTAAATTTGGACTCTGGAGCTTGTAATCGGAGGTGTCGAAATAAATGGTATGACATCACTCACCATTTTAGTtcagtgtttttaatgttaattGTAATGATTTGGAACCCTCTTACAAGCAATATCAGAGCCCGAAGAAGGAAAACCTAAAGCAGAGTTTCAAGAAAACGAAGACCCGAGGTGTCCGTCTTCAGGTTCTGATATTGGTCTGAACCCACTGGGGTTCTTGACATGGTTACAGtaaccaatgttgtaaagaaaatcCACAGTGAAAAGTGCACACACAAGACTAAACACAAATCTACTCTATTACATTCAGCTTTCCTGTGTGGGTGTTTTGGTTTTCAAACTGTGAAGTCACAGTGATGTATGCATGCCTAGAGCATTACAGATACAAAAACTGTACTTtgcccaataaaaaaaaaaaaaaagatcttaatGATAAGATCtgtgcttttacttttactgtCTGTACATTTTTGACAATAAAGAGGCAATAATGAAATGAC
>XM_039799836.1
TTACAGCTGATGTTCTTTGACCCAGAGACAATCATGATCCTCCTGACTCCCTCTTCTGATGAAGAGTCTCTTGAACTCGCCTGGCTTTGGAATCACAGGAAGTTCAGGGTCTCTTCCGGTGTACCAACAAGCTCTTTCTGAGTGATGAAGCCACCGGACTCCAGATCAAGGAGTTTGCACGTAAAAATGCAGCTAATGCTCTTTCAATGTGCAACATGGTCATGGGCATGGCCTCCATTCTCAGCAGTCTAAATGGGCACCATCATGCTGCATGTTGGCTGGTTCTGATTGGCTACCTGCTGGATTTGGCAGATGGAGCAGTTGCCAGGCGACTCGGTGCCTGTTCTGCACTGGGTGCAAAGCTCGATGATTTTGCTGACTTCACGACATTCGGGATTGCCACGTCATTGCTCCTAAGGACGACCGACCTGATGGACAACATCCTGTGCGTGTGTTACgtcttgtctgtgtttgtccgCCTCTGTTTCTTCACGAGCGGGATCCCATTCATGTACCGCGGCCTGCCCTGCATCTACTCCTCAGGCATCCTGGCCagtgtctctctgctgtctggGGGGAACCTGGTCGTGCTGCGGGTCATTGCGGCAGCCATGATCTTCTTCATGATCAGCCAGAGCTTCTACCCCCATGACAAAGTGCTGGAGTCCCAGGCCTGGAAGAAAGTTGTCTATGCTGGAGgaGTCATCATGGTGTTTTGCTCTTCCTTCCCCCCTGCATGTGTCTACTACCTGCTGTGGTCAGTCTCCTACATTTTGTTCCCAACATCCCTTTGGAGCAGTAAAGTGTAAAATGGGTATTGGCTTTATCCAAAACTCCCATATAGGTTTACCTCTGGCCCACCCGGGTGAACTGAGGCTTCCAGACTGCTGCTGCTCCCTACTGCCATGGAGGATCCAAGCTGAACATGCTCATGCTCCACAGGCAAATCACTCGCTCTATTTGACCTTTTTATTTTGACGCAACACCTCTAAAACAAAACCCAGATTGAAGAGAGTTAGAGTGAGGGATAAGAATGAGATTTTAATGTCGCTGGTAAGGACTAACCTTCATGCTGTCTTGTGTCTTTGTTGCATTTTCACTGAAACCGGGAGTTGGATGGCTTGTtccatgatttttttattttttttaatcaggtttATCTCCTGTGGAATCCCCCTACTTCAATATTAATCTTTCATCAATGTTGTGAACACGCAGCAGCAGTCGATATAAAAAAGCAATTATTTCAAATTTAAATAAGCACACAAATTTCTAATATACTTTGGCCTCAAATTTGggttttttaaatatgtttaattGTGTAATCACACTGGATCGTAACTCTTATTATGATGTCCACAGTGTTGAGCATAGCCTAATGAGTAACTGTTTTAGTGCTACAGTATGTAGGAAGCGCCTTTAATCAATGAATATACAACATGATTTCTGAGCAGCATTTTCGAGGTTCAAAATTCCAAGTTCTTTCGGGTTTATCTATAACACAGTAATGGGAATTCGTAAAGGCACTATGACCATGTCTTGTGTTAACTGACTGTCTGTTAACTGACTGTCTGTTAATGTTTGTATCCGGGTTGAGGTCACTTCACTTTCATAGTGTTCAGAGTgggaaatttactttttttccattttgtagGCGTCTCAAATCCAGTGAATATTTGTAAGAAGCTTTCATTTCAATTATTAGATTTGCTGTTTTATAAATAAGTTCAGTTGAAAGTCAGCTGACCACAACTCTGGCATCTGTGAATGTGGAGACTTTCAGACTTTTTACAAAGTTGTGGCTCTGTCCAATAAATGATGTGTTAGATTTCCATATTTCTTCTAAGTGTGTTCTTATTTGCTAATTGTATGTGTTTACCTCTGTTTTAAGAGGCATTGCAGTTTTAATAGTAAATCCACACTGGATCACATAAACATCTCGTAGTACTGCTCTGGCCACAGCTCAATCGGTAACATCAGTGATTTTTAGGTGGAGTCAGGAATGCAACATGAGTGGGCGGCGCCGCCCATAAATGGCAAAGCAGCAGCAGGTTTCTGCCTTGTCATTCAGTGTGAATTTACCCTTAAAGAGCAACAACACGCAGGCTGCGAATTCTGCTTTTTCCTCACCACGCTGCAAGTTTTGCCTCCACCTTAAAGGTGTTGTAACATTGCACTATAGTCCATGTTGGCTGTGCTCACAAATGCACCAAACCACTACTAGTGGTGGAGCAGCATGGAAACATTAAACCCACAAGGAAGGAGAGTTTAAGTGTGTTGTTAATCTTTAACTTGGCCGGCATTCAGTCAGGGGgacatcattattttttttttttgtagactgtgtttcacaatgtgtgtatttgcgCCTCTCTGCATCGTGTGTGGCAAATGGGGAGATTATACAGTATGCCCATGTTTAAATTTGGACTCTGGAGCTTGTAATCGGAGGTGTCGAAATAAATGGTATGACATCACTCACCATTTTAGTtcagtgtttttaatgttaattGTAATGATTTGGAACCCTCTTACAAGCAATATCAGAGCCCGAAGAAGGAAAACCTAAAGCAGAGTTTCAAGAAAACGAAGACCCGAGGTGTCCGTCTTCAGGTTCTGATATTGGTCTGAACCCACTGGGGTTCTTGACATGGTTACAGtaaccaatgttgtaaagaaaatcCACAGTGAAAAGTGCACACACAAGACTAAACACAAATCTACTCTATTACATTCAGCTTTCCTGTGTGGGTGTTTTGGTTTTCAAACTGTGAAGTCACAGTGATGTATGCATGCCTAGAGCATTACAGATACAAAAACTGTACTTtgcccaataaaaaaaaaaaaaaagatcttaatGATAAGATCtgtgcttttacttttactgtCTGTACATTTTTGACAATAAAGAGGCAATAATGAAATGAC
Function
NR:
description |
PREDICTED: CDP-diacylglycerol--serine O-phosphatidyltransferase isoform X1 |
GO:
id |
name |
namespace |
GO:0008654
|
phospholipid biosynthetic process |
biological_process |
GO:0016020
|
membrane |
cellular_component |
GO:0016780
|
phosphotransferase activity, for other substituted phosphate groups |
molecular_function |
KEGG: NA
RNA
RNA id |
representative |
length |
rna type |
GC content |
exon number |
start site |
end site |
XM_039799834.1 |
True |
3150 |
mRNA |
0.42 |
7 |
10303427 |
10316636 |
XM_039799835.1 |
False |
2976 |
mRNA |
0.43 |
7 |
10303395 |
10316636 |
XM_039799836.1 |
False |
2928 |
mRNA |
0.42 |
7 |
10306488 |
10316636 |
Neighbor
gene id |
symbol |
gene type |
direction |
distance |
location |
hspg2 |
hspg2
|
coding |
upstream |
15255 |
10163002 ~ 10288140 (+) |
pink1 |
pink1
|
coding |
upstream |
172141 |
10118685 ~ 10131254 (+) |
LOC120558778 |
NA
|
coding |
upstream |
186560 |
10023340 ~ 10116835 (+) |
fam43b |
fam43b
|
coding |
upstream |
304081 |
9996288 ~ 9999314 (+) |
vwa5b1 |
vwa5b1
|
coding |
upstream |
333472 |
9936549 ~ 9969923 (+) |
magi3a |
magi3
|
coding |
downstream |
10112 |
10326748 ~ 10526334 (+) |
LOC120559190 |
LOC103365742
|
coding |
downstream |
214027 |
10530663 ~ 10540352 (+) |
LOC120559192 |
NA
|
coding |
downstream |
257965 |
10574601 ~ 10583529 (+) |
LOC120558406 |
NA
|
coding |
downstream |
277148 |
10593784 ~ 10747553 (+) |
LOC120558407 |
NA
|
coding |
downstream |
441761 |
10758397 ~ 10811552 (+) |
G48507 |
NA
|
non-coding |
upstream |
289012 |
10010836 ~ 10014383 (+) |
G48481 |
NA
|
non-coding |
upstream |
382587 |
9920048 ~ 9920808 (+) |
G48415 |
LOC103359731
|
non-coding |
upstream |
499049 |
9803739 ~ 9804346 (+) |
G48400 |
NA
|
non-coding |
upstream |
537000 |
9764056 ~ 9766395 (+) |
G48399 |
NA
|
non-coding |
upstream |
550850 |
9752026 ~ 9752545 (+) |
G48594 |
NA
|
non-coding |
downstream |
87416 |
10404052 ~ 10404759 (+) |
G48602 |
NA
|
non-coding |
downstream |
195186 |
10511822 ~ 10542926 (+) |
LOC120559193 |
NA
|
non-coding |
downstream |
227373 |
10544009 ~ 10560240 (+) |
G48639 |
NA
|
non-coding |
downstream |
269523 |
10586159 ~ 10586543 (+) |
LOC120558408 |
NA
|
non-coding |
downstream |
319840 |
10636476 ~ 10637645 (+) |
agmat |
agmat,LOC102790280
|
other |
upstream |
152144 |
10139598 ~ 10151251 (+) |
ubxn10 |
NA
|
other |
upstream |
378314 |
9922600 ~ 9925081 (+) |
G48347 |
NA
|
other |
upstream |
873448 |
9404224 ~ 9429947 (+) |
LOC120559255 |
tshz2
|
other |
upstream |
1181483 |
8990487 ~ 9121912 (+) |
G48162 |
NA
|
other |
upstream |
1576843 |
8716767 ~ 8726552 (+) |
G48640 |
NA
|
other |
downstream |
297395 |
10614031 ~ 10750428 (+) |
G48752 |
NA
|
other |
downstream |
855959 |
11172595 ~ 11173654 (+) |
G48765 |
NA
|
other |
downstream |
998026 |
11314662 ~ 11315992 (+) |
xkr5l |
xkr7,LOC103354446,LOC100690518
|
other |
downstream |
1767816 |
12084452 ~ 12090773 (+) |
LOC120559364 |
cables2,LOC103354454,LOC100695798
|
other |
downstream |
1776143 |
12092779 ~ 12103899 (+) |
Expression