LOC120558724


Basic Information

Item Value
gene id LOC120558724
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 12129836 ~ 12141802 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799909.1
TCAGACACTGCTGGTCACTTTCTGCCCTGCTTCTCTAGCATTGGCAAAGTTTCAGTCTTCGGGATGGAGAACAACCAGTCGGATGTCTTCAGTGAGCTGTGAGaagaagaagaagagaacgAGAGTCGTGATGAACAGAGACGGAGACAAGTGCGCAAAGACTGCGCTCCGGAGCCAGAAACAACCCAGGTCGCAGCAGCAGGTTTCTacccagaagaagaagaaagatctGGCTTCTATAAATGCCCAAAGTGGCTCTCAGTCAGGTCAGTGCGACTCTGAGAAGGAGGTCAAATCGGCGGGACTGCAGGGGAAACGACCGGTAAAAGTGTCATCGAGCGCCACGGTGGAGTGCCCCGGCGCGCAGAGGAAACTGTCCGATGCCAGCAACACTTCAGAGGACCTGAGCAAAGACTCCGGCTGCCTGTCTGGGAAACTCTCCTCCTCAGACAGCAGCTCAGAAATATCCGACTGCCCCTCGGAGGGCAACAACAATAAGCACAACTTCGCGAGCAGCGACAATTATTTAAGCTGGATTGACGGGGAAGCTTTTTTGAGCCCGGACAGCGAGAGGAAAGGCGAAGGAAAACCGTGCGTAAAGGTGCCGAGGGATACCTGCGCTCTCCAGCCTAATGCTGCTGGACAGGGTCTCAGTTTGTTTAATTCTTCGGGGTCGTTTATGGATCTCATGATGGGAGAGACAACCGAAGATCTTGTCAGGGAGGTGGAAGATTTGAGGTCAGAGAACGAGTATTTGAAAGATGAGGTGGAGGAGCTTCGCTGTGAGATGCTGGAAATGCGCGACATGTtccaggaggaggaggtgttcCAGCTGCAGGAGCTGCGGCTGCAGCTGGAGCAGGCCAACAAGACCTGTCGCATCCTGCAGTACCGCCTCCGCAAGGCCGAGCGCCGCAGCATCCGAGTGGCTCAGACGGGGCAGGTGGACGGGGAGCTGGTCCGGGGCTTGGAGCACGATATTATGATTGCAAAGAGTGTGTCCCTCCGGCTGTACAACGAGCTGGAGGGGGTGCAGAAGAAGAATTCCCAGTTGGAGTGGGAAAATGAGGCACTGCGTGAGAAGACCCAGGAACTGGAAGTGGCCAAGCAGGTGTTACAGGCTGAGGTGGAGAAAGTCAGAGAGAGCACTCTGAAGAAGAAAAGCCTCCGATCAACAGCCAGTAGAGCTGAGAAAAGGCTCTCTCAACAGATCGAGGATGACAGTGCAGATCTCAGGTGCCAACTCCACTTTGCCAAAGAGGAATTAGCTCTCATGTGCAAGAAGCTCACCAAGTTGGTATCAGAGAGCGAAGGCATGCGCGAAGAGCTGGCCAAATACCACTCGGCCTACGGCGATATCCAATCGCCTGAGAGCAAACAAAACTCCGCCCACGCAAGGGAGGCAGGGGTCAAAGTTCACCTGAAACTGGTGGAAGAGGAGGCCACACTCCTGAGCCGGCGCATCGTTGAACTGGAGGTGGAGAACCGTGGATTGCGAGCAGAAATGAGCGACCTGAAAGAGAAAacgggaagaggaggagggggaggaggaggaggaggaggaggaggaagagaaccGGGATGTGTTGGAGGAAAATCTGTCAGCTGGCACACCGGTGAAGGACAGAGAGGGAAGTTTGGAAATAGCATGCACAACGTACAAGCAGGGTCAGGACGAGGCAGCAATGGAGGTAAAAGTGATGTTGAGACTTCATCACAGACTGACGGCACGATTACTGCTTGTCATAGTAGTCGAGAGGGTCCTGTGGGTGGTGAGTGGGACCCTTTAGACGGTCATGAGAgtgataacaacaaaaaaacggaCAGAGGTCTCAAAGGAATGACGGTGAAAGACTATGAAACTCTTCTAGCTCTCAGAGATCATTCCTGCATTTTAAGTTCCGCTATCCAGCTTCTGACGTCGCCACCAAACACTGGCCACCACTCATCTACCTCATGTGATTTTACCTCTCTGACAGAAGTGGACTTAGATGGCAAGGCACATCAAATATTCTCACCAGGGCCTTTGAATGAGGCTTTGGAGCTTCTACAGGCCATGCTGTTGGCTTTAATTGGGAGGGTGGAGACGTTCCTAACAGGAGAAGATCTAGGCAAACTCTCCGTTCACAAGGACGGACATGTTGGGGATTTCTGcactttctcctttctctctggAGACGGTAAATATCTTAATCTCAAAGAGTCACCAAGTAAGCAGGAGAGTGTAGAAGACCTCCACACATCAGAGGTTAAGGAGAGAGCACAAGTGAGCCACGCAACTTGCTTCCAATCGGACCTCATCCGCAGCTGCAGGGACCCAAAAATGCAACTGTCCTTGCAGATTCTGAGGATCCTCCATCAGTGGTGTCACGTTAAAGGACGCGGGGTGGAGGCAAAAGAgGGTAAAGACAAAACCATGCGTATGCTGCAGGAGTTGTTGCAAGATCTCAGTGCAGAGCTTCGGGATGAGCGGATTGAATTCAACAGTGAGGCAGCTGAGTGTGCTGTCAGTGGTCTCTTTCATAACGAAGTTGACAGAAAGTGCAGCTCAAAAGTGAAAGGACTTTGGCGACAGTTTTCTCCTCACGGCTGTAAGAGGAAGAACTGGTGCTATCTGAGCCAAGAGGCTGCCCAGCTGGACCAAGAGGACCCCGTTAAGACGTGGGACCATCTAATCATGCCGCTTAGCTTCCCTGATCTGGACTTTGAGCAGATGTCCATGGAGAGAAGCCACACTTCCCCGGAGAAGTCGGCCTTCCGCATCTACTACAGCCCCCCATCAGCTCGCAGAGTCCAGCTGGCTCAGCTGAAGCAAAGCCCTGTCGCAGACAGAGAGTCTGTCAACTCTGGCTCGCCCTGGTGCACACCGCCGACCTCCCTCTCTCCGCTCTGTCTGGGCTCAGCTGCGAACCTCAGTGACGACATGAAGGAAATGACGGCCAGCTGGCGGCAGACGGTTCACGGCAGttcacaggagaggagagggagattACAGCAGCGCTGGGTGGACGTGGCCTGTTCAGGGACTCAGACCCACACGAAGCCACAGATGGTGAGTGTTGGTCTGCAGACAGATGGCTCAGTCACTGTGAGAAGCAGTCCATCCCGGGTCCTGAGCACCTCCCTGGTCTCCCCCCGCTCTCACCACATCTCCACCTCACTGGACGCGGTGTCAGGCAGAGTTGAGAGGTCCAGACCCTCCACCTCCTCGCCTAAACTCTACCGGAGACACTCTGCATCCGGAGCGTTCTCTCCCCCCTCATCCACCAATTTGAGCTCCTCCTCATCAACATCCACCTCGAGAGATCGAGCTCTGTGGAACCTGAACCACCAGAGCCACAGCGGCCTCACATGGACCCGACAAACCAGTCACAGAGCCGGTGCAGGACAGAACCACAGCTCTGTGAGCAGCGCCAAGCCACCAAGCAAACCTGCAGGCACCCACCGTTACGGCATGGTCACAGAGTTCCTGCGCAGGGTGAGCGGCCGGGCAGAGAAACCGGTACCGGGGTCAGGGCAGAAGACTAAGAACAGTATGAAGAACCTGGAACGCGTTCCAACGAGGCCTGCTGCCGCCCCGCTGCACAGGAGCGACAGCGTGACGAGGATCGTCAACCAGAGGTTCATGAAGCAGAGAGAGGAGGCCGGTCGGGcccagagagaggagaaggccAGCAGTCTGAACCACGGTGTCCGACACAGCCCGAGTACCGTCACAGCAGAGGATGGAAACTACGACTGCAGCTCCAGCAGCACTTTGACCTTCTGCTTCGCTCGTCCATCTCGCTCCGCCCAGAGACAAACGTCACACCAGAGCAAACTCCACCGGCACAGATACTCGCCTCCAGCGAGCGCGGCTGCAGAATCCAACTGCGAGTGACCGGGCGGAGAACATACTGATGCTTCTGGACAGCTGAGAGCGCACAGAGACGGGGAAGGGAATTTAAAACTGTAATCTTCAAATGTAAGCCTGCTTTACTGCAGGATGGTTGAACTGGGACAACTGGTACACTGTATGTGGTATACGTTTTGACTTCTTAGCttagtccttatgttttcttttGGTACATTTTATAACACTCATCTCCTTTTACAGATGGGCTAACTGTGGATTTCAATTACAAAAAGCTACAATGTCATATTTACAAATTTTAAACTTGATTTTACACTTATATTGTAAACTGCAAATTAACTTTATATTATCTTTGTAGAATTTTGTAGCGAACAAactgttttattaatatttattaattccttTACTTGCCAAGTACATTTACACATACGAGGAATGTCTCCTCttcatttaaatgcatttattGAATAAACAGATCTGAATAACAGGATGTCGTGATCTTATTTATATAGCTTCACAATCACACCTCTCCCTGAAATCTGATTCTTTTTAAGCTGCAGAAATGCCGTAGTAATCAGCTGTTACGTCACAtgctcaaaaaagaaaaagtaactGCTAAGAAGTTAATAAGATAAGATTTCCTCGCCTGTCAGGAGTGtgatcctcctcctctccccctctctctctctctttctctgtttgtgtgaCTTCACTTTCACTTGTTCCATGTGTCTTGTCTTTGGCATTGCCTGTCTTgctgttttattatgttttttatctAATGTAAGGTGACCTTGGGTGTTTTGAATGGCGCctccaaataaaatgtattattattattattattattattattcactgTCACTGAATAACTGCAGCCAGCTCATCAAGTTACAAGTTTAGATCTttgttttgtaactttgtgaTTGCCTAAATGTATTGATATATTATTAGTACCATTATTAAATGTTGATATGTAGTGTGCGACGGAAGCTCAGATTTTTTTTGGAGCCGATCAGCTGAAATACTTTGTCTCCTCTCGGTGGCGTCTGGCAGCTGGCCGGCTGTTGTCAAGGACCGAGTCACACAATCACACGGTGTCACATTTCTTCTCAACACACATTTTCACCCTCTtctattttacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaccataaccCAGTTTTAATGAAAACGAGAATGTaattaggggtgtaagaaaaaatcgatacacttgagtatcgcgatactttattt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799909.1 True 5155 mRNA 0.50 11 12129836 12141802

Neighbor

gene id symbol gene type direction distance location
rap1aa LOC106952760,LOC107389464,LOC101074250,LOC103139095,LOC100690250,LOC107090729,LOC105935262,LOC102226994 coding upstream 46994 12068413 ~ 12082842 (+)
kdm5bb LOC103354421 coding upstream 66573 12043095 ~ 12063263 (+)
tuba5 LOC103354413,LOC100695265,LOC101484757,LOC102298344 coding upstream 105889 12017664 ~ 12023947 (+)
LOC120559247 NA coding upstream 112269 12008707 ~ 12017567 (+)
klhl12 klhl12,LOC102781379 coding upstream 119912 11980784 ~ 12009924 (+)
LOC120559656 gid8,LOC100691864,LOC107090700,LOC102225438,LOC105935248,LOC101169608,LOC101073127,LOC108231957,LOC103139083 coding downstream 99244 12241046 ~ 12243801 (+)
emilin3a NA coding downstream 201517 12343319 ~ 12347248 (+)
opn7d LOC104933009,LOC103354604 coding downstream 209831 12351633 ~ 12363904 (+)
rad21l1 NA coding downstream 226994 12368796 ~ 12379697 (+)
LOC120558417 NA coding downstream 239230 12381032 ~ 12386273 (+)
G48978 NA non-coding upstream 147101 11953174 ~ 11982735 (+)
G48986 NA non-coding upstream 221964 11907779 ~ 11907872 (+)
G48980 scrt2,LOC107391295,LOC102228875,LOC108249568,LOC106536404 non-coding upstream 226357 11881963 ~ 11903479 (+)
LOC120559701 slc13a3,LOC103399527 non-coding upstream 266896 11860102 ~ 11862940 (+)
G48876 NA non-coding upstream 376599 11752998 ~ 11753237 (+)
G49086 NA non-coding downstream 340 12142142 ~ 12142527 (+)
G49094 NA non-coding downstream 4402 12146204 ~ 12146526 (+)
G49105 NA non-coding downstream 69942 12211744 ~ 12212515 (+)
G49106 NA non-coding downstream 78211 12220013 ~ 12223054 (+)
G49157 NA non-coding downstream 222291 12364093 ~ 12364441 (+)
LOC120559364 cables2,LOC103354454,LOC100695798 other upstream 25937 12092779 ~ 12103899 (+)
xkr5l xkr7,LOC103354446,LOC100690518 other upstream 39063 12084452 ~ 12090773 (+)
G48765 NA other upstream 813844 11314662 ~ 11315992 (+)
G48752 NA other upstream 956182 11172595 ~ 11173654 (+)
G48640 NA other upstream 1379408 10614031 ~ 10750428 (+)
nol4la LOC103354513,LOC100696587 other downstream 40407 12182209 ~ 12210409 (+)
trnae-cuc_14 NA other downstream 81765 12223567 ~ 12223638 (+)
LOC120559657 LOC102305201 other downstream 103843 12245645 ~ 12254060 (+)
si:dkey-70p6.1 LOC100692404,LOC101477341 other downstream 141625 12283427 ~ 12303403 (+)
G49209 NA other downstream 310733 12452535 ~ 12458439 (+)

Expression


Co-expression Network