LOC120558796


Basic Information

Item Value
gene id LOC120558796
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 7271418 ~ 7279008 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800058.1
GCTGAATAAGTCTGACTCAGGACGGTACAGATGTCGTTTGGACCGATCTTTCTCTTCCCATCATCATACCAGGAGATTGAGATCCGAGTTACAGATGCTCCAACCTCTCCTCTCAGACCTTCTTCACCATCAGTCCCATCAGCCTCCCCTGAAGCCAGCGAGCAGActccacagaaacacacagctcCAGGGCTGGTGCTGTATGTGCGTCTCCCTCTGGTCGTCTTGGTCATCGTATTATCAGTGGCTGCTCTGATTTTCTGCAGGAAGAGGAACAGGAAACCCAGCGAACCTCCTCTGGAAACTGAGTACTCTAATGTCACAGAGGCCAACCGAGTGTATGAGGAgatcagagaggacagacagagcaCATCTCCTCCTGTAGAAGTGTCTACAGTTTACACTTTCCACCGAAGCCAGTTCTCAGAAGAAACTCCAACCTCTCCTCTCAGACCTTCTTCACCATCAGTCCCATCAGACTCCacactgatgacatcacagagTTTAAGCTCCACACCTTCATCAGCCTCCCCTGAAGCCAGCGAGCAGCCTtgagagaaacacacaacaccAGCTGCACCTGCAGCCTCAGGGCTGGTGCTGTATGTGCGTCTCCCTCTGGTCGTCTTGGTCATTGTATTATAAGCGGCTGCTCTGATTTTCTGCAGGAAGAGGAACAGGAAACCCAACGAACCTCCTCTGGAAACTGAGTACTCTAATGTTACAGAGGCCAACCGAGTGTATGAGGAgatcagagaggacagacagagcaCATCTCCTCCTCTAGAAGTGTCTACAGTTTACACTTTCCACCGAAGCCAGTTCTCAGAAGAAAACTGAAGAGAACTCGAGGAAACAACTGTGaggtggatttatttttttgctcctCTAAGTGTAAAGAGTGTTCAAGGTTTAAAGTGAACAAAAAATAACTCTGGTGAATGAATCAGAACAGAacca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800058.1 True 960 mRNA 0.49 10 7271418 7279008

Neighbor

gene id symbol gene type direction distance location
LOC120558794 NA coding upstream 4983 7261702 ~ 7266435 (+)
LOC120558604 NA coding upstream 91221 7172361 ~ 7180197 (+)
LOC120558799 NA coding upstream 122032 7143788 ~ 7149386 (+)
LOC120558603 NA coding upstream 135576 7126624 ~ 7135842 (+)
LOC120558791 NA coding upstream 205245 7027077 ~ 7066173 (+)
LOC120558666 LOC100692487,LOC102794907,LOC102302796,LOC101487578 coding downstream 354872 7633880 ~ 7650645 (+)
LOC120558668 LOC101467015,LOC102195234,LOC101063096,LOC101170270 coding downstream 373065 7652073 ~ 7671014 (+)
lima1a NA coding downstream 451807 7730815 ~ 7764951 (+)
LOC120558968 LOC105935211,LOC103363443,LOC101066234,LOC106920718 coding downstream 486592 7765600 ~ 7773185 (+)
igfbp6b LOC103366149,LOC101464910,LOC100708122,LOC104966704 coding downstream 563138 7842146 ~ 7848434 (+)
LOC120558803 NA non-coding upstream 19166 7161017 ~ 7252252 (+)
G47536 NA non-coding upstream 132532 6981415 ~ 7138886 (+)
LOC120558802 NA non-coding upstream 188344 7082881 ~ 7083074 (+)
G47543 NA non-coding upstream 207812 7062067 ~ 7063606 (+)
LOC120558814 NA non-coding upstream 269705 7000551 ~ 7001713 (+)
LOC120558808 NA non-coding downstream 30993 7310001 ~ 7313720 (+)
LOC120558816 NA non-coding downstream 34731 7313739 ~ 7316913 (+)
LOC120558807 NA non-coding downstream 114932 7393940 ~ 7395907 (+)
G47762 NA non-coding downstream 177467 7456475 ~ 7456739 (+)
G47768 NA non-coding downstream 189413 7468421 ~ 7469071 (+)
ccm2l ccm2l,LOC102778549 other upstream 550486 6697993 ~ 6720932 (+)
G47444 NA other upstream 1070824 6199046 ~ 6200594 (+)
LOC120559501 NA other upstream 2496060 4772932 ~ 4775358 (+)
gpr173 LOC104932793,LOC101475032,LOC100694027,LOC104957049 other upstream 3405620 3843064 ~ 3865798 (+)
LOC120559404 NA other upstream 3756660 3448104 ~ 3514758 (+)
G47903 LOC104965021 other downstream 833433 8112441 ~ 8116228 (+)
pkig pkig other downstream 1063742 8342750 ~ 8380578 (+)
LOC120559763 NA other downstream 1199115 8478123 ~ 8497394 (+)
LOC120559293 pifo other downstream 1375404 8654412 ~ 8662891 (+)
G48077 NA other downstream 1401274 8680282 ~ 8687964 (+)

Expression


Co-expression Network