LOC120558822


Basic Information

Item Value
gene id LOC120558822
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 14703693 ~ 14705687 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800084.1
ACGCCTAAACCAAAAGTTGTGATTTATTTACAGGCTGTCTGTCTCGTCTGTCTCTCGGTTGCAGGCTCGTTTATCGGCTCGGAGCTAACTTTGCCGCACTATGACCTTCTTCGGTTTAACACACCTGGGTTATCAAAACCCAATAGGCGATAAAATGATAGTGAATTCCAGAGGAGCGTCTCAATTCCGGGATGGTGAGATTAACACCAGAGCAGGACTGCCTCCATCTCTTCAAGGAGAACAGGGACCCCTCAGATGTAATGACACATGCAGCGTTTACCACCAGCCTCTTCCCTACAGCGCTGACATACACCATGGGAGCCATGAGCGATACAAAGAGATGGTCAAACGGGTTCAAACACCCAGGGCCCCTAACCAGCTGTACATAATGCCTCTAACGGACAGCCAGCAGTATGGATGGATGTTGTCCAGGAATCCTGAACCATGGACCCAAGTCAAACGCTTTCCCCGAAAGAACAGTGAGATGACAAAGTTTGTTAAAGAAATGTCAGCGACAGACCCGGAGTTCAGCCTGTTCTGACAGCCTTTCTTCTTCAGTtatgacacacacgcacacacacgcacgcaaagCAGCATCAATTTTGATGTGCATTACGAGATTAAATTGATAGCAGATCcacttttttttgacgtttttcatgcttcatttcattttttttttacttgcaaTCGAAAATCTAGTTTTATGGTAAGCTATTTTTTACACGAGCTATGAGTAACTAACTACCTCTCTAAAACATTATTTCTTAACCCTTTTAGCTCCCAACTTTTATAAAAGAAGTCTGAAGGTAGTCCAAAGAAATTTAGAGCAatttttcagtgttaaacaaGCAATAAAAATGTACCAACtaccacatttttattttacaagtcaAGATCAAGCAGGgtccagaccatagactgtatattaatggacagagcatgtgtgacatcacccattggttta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800084.1 True 967 mRNA 0.43 4 14703693 14705687

Neighbor

gene id symbol gene type direction distance location
LOC120559695 LOC103358635,LOC104952763,LOC102794158,LOC101484659 coding upstream 19683 14676272 ~ 14684010 (+)
LOC120559203 LOC102794447,LOC101484947 coding upstream 31691 14620148 ~ 14672002 (+)
LOC120559201 gls2,LOC104942574 coding upstream 87251 14600277 ~ 14616442 (+)
aaas aaas coding upstream 142299 14552233 ~ 14561394 (+)
pcbp2 LOC103358643,LOC100702237,LOC101072611,LOC101159823,LOC103144045,LOC107094832,LOC107391117,LOC101487433 coding upstream 164092 14531154 ~ 14539601 (+)
LOC120559093 cacnb3,LOC102792394,LOC106525262,LOC103467623,LOC107090276,LOC100704754,LOC102209744 coding downstream 75549 14781236 ~ 14805118 (+)
prim1 prim1 coding downstream 133671 14839358 ~ 14844312 (+)
naca naca,LOC107737655,LOC106571941 coding downstream 139650 14845337 ~ 14853817 (+)
LOC120559927 NA coding downstream 146709 14852396 ~ 14852469 (+)
LOC120559926 NA coding downstream 147867 14853554 ~ 14853627 (+)
G49778 LOC102302837,LOC101485799,LOC100702507,LOC103358639,LOC104919652,LOC103385584,LOC106524244 non-coding upstream 112917 14585449 ~ 14590776 (+)
G49775 LOC107731244 non-coding upstream 134096 14568325 ~ 14569597 (+)
G49764 NA non-coding upstream 152134 14551310 ~ 14551559 (+)
G49762 NA non-coding upstream 156598 14546864 ~ 14547095 (+)
G49761 NA non-coding upstream 156971 14545395 ~ 14546722 (+)
G49883 NA non-coding downstream 197229 14902916 ~ 14970803 (+)
LOC120559279 NA non-coding downstream 502055 15207742 ~ 15241127 (+)
G50002 NA non-coding downstream 570426 15276113 ~ 15276360 (+)
G50003 NA non-coding downstream 571759 15277446 ~ 15277646 (+)
G50014 NA non-coding downstream 716632 15422319 ~ 15422608 (+)
G49776 NA other upstream 126121 14574542 ~ 14577572 (+)
G49773 LOC103358639 other upstream 136237 14564867 ~ 14567456 (+)
uhrf1bp1 uhrf1bp1 other upstream 475805 14205597 ~ 14227888 (+)
hmga1a hmga1,LOC103355299 other upstream 582671 14113015 ~ 14121022 (+)
LOC120558697 LOC103355228,LOC101470284,LOC102288766,LOC101062828,LOC100700879,LOC102197182,LOC102790759 other upstream 978703 13658732 ~ 13724990 (+)
zmp:0000000926 LOC104958731,LOC103370836,LOC104919619 other downstream 1066530 15772217 ~ 15798957 (+)
G50045 tnnc1,LOC107391089,LOC103147776,LOC100708228,LOC108232086,LOC105932306,LOC102236084 other downstream 1070530 15776217 ~ 15867369 (+)
slc6a1a iqsec1,LOC104940213,LOC107088165 other downstream 1180303 15885990 ~ 15969331 (+)
LOC120559121 NA other downstream 1598625 16304312 ~ 16311017 (+)
LOC120559119 LOC104967193 other downstream 1617134 16322821 ~ 16379645 (+)

Expression


Co-expression Network