c5h1orf174


Basic Information

Item Value
gene id c5h1orf174
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 28504486 ~ 28508540 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800111.1
TCAGAGTGAACCTCTCTCAGGAAACGGCGGCTCCATCTCCACACtagcacacacagcagcacaggcGGAGACGCCACATATCATCACAGCTTACAAGCATAGTTATTAGTAACAAAAGCCAGTTTATTTAGAGAATATCAGGGACgctgaaaaataaaagcattacgCCGGCAAATGATGCACAAGATGCCTGGTCAACTTGACAGCTTGAAGCCCAGAAAGAGGAAGAGCAGTTCCAGAAAGCCACAGGCTTCTACTACAAGGAGGAGATGTATGAAAAGTCCAGAGACACAGCTAGCCGCAGAGAGCAGTTCAGTGGTCAGTGGTTACAGCGAAGCAGACGATCCTCTAGAGACCCTCTCCTGCATCAGCTGTGAATGCCACCAGTCTGCAGGCAGGAGGAGATGCTCAGCATCCCCAGAGCTCGGGGGACAGGAGGGCAAAGAGAACGGACTGAGGACGGGGCTGGATTTGGACAGCTGCAGAGTGAACAGCGTGTGGGACAAACAGGAGTCTGAGGACATGGATTGTGAAGGAACCAGTAAAAACATCTTCCCAGATGACGACAGTAATCAGATTCTTCCTGTGGAGCAGTTCTTTGGAAACTTGGATGTTGTACAGGACTTCCCTTACAAATCGTCGGAGAGTTCCGCCCATGTTCAGAAGGAGAACAGGAGACGGCATTACTACGCACGAGAGGACAGCGATGAAGAGGAGGCGGGCCTCAGCAGTGTGTAGCGAGACGACAGAGAGGACACTTAGTGAAGAGTAACTGCCCCGATGACTGTTGTGGACTCAAAGTCATGCCTGCTGAAGGACATACAACGCTCAGCACTTAGGAAAAAACAGCCAAATTAAACCACCTGTTCAGATGCTGCGTTCGATCCGAACGCTCTCTCAAATATAGCATGAGTGGCGGCGCTCACGAGTCGCTGGTGATGAAGTTGCCCACTGCGACGTGAGTAAGGGAGGCATGAACTTGCTGTAGCTAAATCTGCTGTTAGCCGACTATTATTGTATGAGCGTATTTGCTTCAAACCTGCTTCCAGTACCCCGACATGAGCTGAAGAGATTCGTCACAACCAtcgactgttaatattaatggacagcgcATCCGGTTCAGccaagtgctgcaaatgcggaagtgccttcaAACTGCCTTCTGTCAGAAAGTC
>XM_039800112.1
TCAGAGTGAACCTCTCTCAGGAAACGGCGGCTCCATCTCCACACtagcacacacagcagcacaggcGGAGACGCCACATATCATCACAGCTTACAAGCATAGTTATTAGTAACAAAAGCCAGTTTATTTAGAGAATATCAGGGACgctgaaaaataaaagcattacgCCGGCAAATGATGCACAAGCCACAGGCTTCTACTACAAGGAGGAGATGTATGAAAAGTCCAGAGACACAGCTAGCCGCAGAGAGCAGTTCAGTGGTCAGTGGTTACAGCGAAGCAGACGATCCTCTAGAGACCCTCTCCTGCATCAGCTGTGAATGCCACCAGTCTGCAGGCAGGAGGAGATGCTCAGCATCCCCAGAGCTCGGGGGACAGGAGGGCAAAGAGAACGGACTGAGGACGGGGCTGGATTTGGACAGCTGCAGAGTGAACAGCGTGTGGGACAAACAGGAGTCTGAGGACATGGATTGTGAAGGAACCAGTAAAAACATCTTCCCAGATGACGACAGTAATCAGATTCTTCCTGTGGAGCAGTTCTTTGGAAACTTGGATGTTGTACAGGACTTCCCTTACAAATCGTCGGAGAGTTCCGCCCATGTTCAGAAGGAGAACAGGAGACGGCATTACTACGCACGAGAGGACAGCGATGAAGAGGAGGCGGGCCTCAGCAGTGTGTAGCGAGACGACAGAGAGGACACTTAGTGAAGAGTAACTGCCCCGATGACTGTTGTGGACTCAAAGTCATGCCTGCTGAAGGACATACAACGCTCAGCACTTAGGAAAAAACAGCCAAATTAAACCACCTGTTCAGATGCTGCGTTCGATCCGAACGCTCTCTCAAATATAGCATGAGTGGCGGCGCTCACGAGTCGCTGGTGATGAAGTTGCCCACTGCGACGTGAGTAAGGGAGGCATGAACTTGCTGTAGCTAAATCTGCTGTTAGCCGACTATTATTGTATGAGCGTATTTGCTTCAAACCTGCTTCCAGTACCCCGACATGAGCTGAAGAGATTCGTCACAACCAtcgactgttaatattaatggacagcgcATCCGGTTCAGccaagtgctgcaaatgcggaagtgccttcaAACTGCCTTCTGTCAGAAAGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800111.1 True 1175 mRNA 0.50 4 28504486 28508540
XM_039800112.1 False 1118 mRNA 0.50 3 28504486 28508540

Neighbor

gene id symbol gene type direction distance location
cep104 cep104 coding upstream 4010 28459161 ~ 28500476 (+)
LOC120559027 NA coding upstream 62103 28420529 ~ 28442383 (+)
LOC120558753 NA coding upstream 105405 28390403 ~ 28399081 (+)
LOC120559025 NA coding upstream 127315 28363176 ~ 28377171 (+)
soga1 NA coding upstream 200208 28199573 ~ 28304278 (+)
nphp4 nphp4 coding downstream 3507 28512047 ~ 28697909 (+)
cfap74 cfap74 coding downstream 674786 29183326 ~ 29245568 (+)
gnb1a gnb1,ol-gb1,gnb1a,LOC107385217,LOC103044197 coding downstream 742434 29250974 ~ 29294158 (+)
LOC120559728 slc35e2b coding downstream 831166 29339706 ~ 29348037 (+)
mad2l2 mad2l2 coding downstream 852458 29360998 ~ 29364410 (+)
G53782 LOC103356136,LOC104946517,LOC101486029 non-coding upstream 1573 28500587 ~ 28502913 (+)
LOC120558758 NA non-coding upstream 50211 28446442 ~ 28454275 (+)
G53770 NA non-coding upstream 179553 28324728 ~ 28324933 (+)
G53734 NA non-coding upstream 307730 28196546 ~ 28196756 (+)
G53696 NA non-coding upstream 346553 28156713 ~ 28157933 (+)
G53884 NA non-coding downstream 447020 28955560 ~ 28955816 (+)
G53885 NA non-coding downstream 456096 28964636 ~ 28970345 (+)
G53897 NA non-coding downstream 597254 29105794 ~ 29106722 (+)
G53948 NA non-coding downstream 839994 29348534 ~ 29349109 (+)
G53956 NA non-coding downstream 864269 29372809 ~ 29373489 (+)
LOC120558754 NA other upstream 88739 28407271 ~ 28415747 (+)
G53775 NA other upstream 158570 28341922 ~ 28345916 (+)
casp9 LOC104954971 other upstream 181707 28319637 ~ 28322779 (+)
bsna bsn,LOC102782891,LOC106513106 other upstream 360685 27954399 ~ 28143801 (+)
LOC120559343 NA other upstream 909077 27585525 ~ 27595409 (+)
nadka nadk other downstream 788064 29296604 ~ 29323242 (+)
plekhm2 plekhm2 other downstream 1015483 29524023 ~ 29545886 (+)
ano11 ano7l1,LOC102309663,LOC103367289,LOC103384790 other downstream 1040204 29548744 ~ 29567773 (+)
G54103 LOC103366252 other downstream 1243906 29752446 ~ 29758010 (+)
szrd1 LOC103366254,LOC108233026,LOC106518923,LOC101072016,LOC107390353 other downstream 1261312 29769852 ~ 29782937 (+)

Expression


Co-expression Network