iqsec2b (iqsec2,LOC102793072,LOC103355372,LOC101076483)


Basic Information

Item Value
gene id iqsec2b
gene name iqsec2,LOC102793072,LOC103355372,LOC101076483
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 12561811 ~ 12587368 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800152.1
CAGTGGAGTACCTCCTGGAGCTCAACAACATCATTGAGAGCCAGGCCAAGCTCCTGGAGACCCAGCGCCGGCGCATCGAGGAGCTGGAGGGCCAGCTGGACCAGGTCAGCCAAGAGAACCAGGACCTGAGGCATGATCGCAGCCCACGGACGCCTGCTTCAGACACTCCCGAACAGAACCACAACCATAGCCAGCCTCTGTCCCTCCCCATCCATCACGGCGGTGGCGGTGGCGGTGGCGGTGGCGGTGGCGGCGGCCGGCGGCGGCGGGAACGGTAGCACTTCGACGGCTCAGGCAACAGCTGCATCAACCGCAACTCCAGGGCCCAGCAGGGAGAGGAGGATTCACACCAGGCTGACCCGAGGTCTctcctgcagctcctccaccaaCGAGCGAGACCGGCTCGAACGCACCGACAGCACAGACACCAACGCCAGCTCAACCATACGGAGAAATGTGGAGGGGGATTCCCAGTGTCCAGAGACGGGCACCCACAAAGACAGCTCATTCAGCCAGACATCTTACCTGCGCGGCTCAGAGCGCTACACTGACAGCAGCACCAGCGGCGCACCCTCCGCATCCAGGGACCCTTCATGCGTGTCGGCCTCCAGTTCAGCCAGCCTGGCCTGGGCACTGCGAACTCGCCACCAACCTGCGAGTCTGGCCCTCCGCAagcaagaggaagaggagaacaaGAGATGCAAGGCGCTTTCAGACAGCTATGAACTCTCAACCGATCTGCAGGATAAGAAGGTGGAGATGCTGGAGAGAAAGTACGGTGGCTCCTTTGTAAGTCGCAGAGCAGCTAGGACCATTCAGACGGCTTTCAGACAGTATCGCATGAACAAGAACTTTGAGCGCCTCAGAAGCTCGGCGTCAGAGAGCCGCATGACACGCCGCATCATCCTGTCCAACATGAGACTGCAGTATTCCTTTGATGAGCGACAGCCTCAGCAGCAGGCCCAGACACAGACGAATTTCACCCACAATGTGGCAATAGGGCCTCCTCATTCCCCTATCCCAGAACGCCCAGGAGACTACACCCACTTAGAGGACTCCTTCTCCAAACAGGTCAAGTCCCTAGCTGACTCCATAGACGACGCCCTTACCTGCCGCGCGGGTCGCGATGACTCCCAGGAGGGCAGCAGGGAGGGTGGAGGGATTAGTGAAGACTTTGGGGAGTGCgtgtggagcagcagcagcaatccCTCCTCCCAAAGAGGTTTGGGAGAACGAGCCAGGGGAGCTGGGGGAGGACTCAGTATGCATGGCGACAGTACCGCCACCTCGTACAGTGACGTCACCCTTTACATGGATGATGGCATTCCGTCATCCCCGCTGTCCCTGGATCGGGCACccagcagcacagacacagagTACTGGGGCCCCGGGGGTGGTGTCGGAGGGCGCGAGGACAGCAGGGATACTGAGGGAGGGGGCAGCAGTAACAGTCGGCGCAGCACCCCGTGTACCGAGTGCAGGGACTACCGTCTAAGGGGCGCACATCTGCCTCTCCTCACCATTGAGCCGCCCAGTGACAGCTCAGTGGACACGAGTGACCGCTCAGATCGTGGCTCTCTGAGCAGACAGCTGGTCTATGAGCAGGAGCCTGGGGTAGGGGCTGGCTCCCCTCAGGGAACCCTAAAACACTCCCCCAACACAGGCGCCCGCCCTACCTCCACAGCAGCGGCCCAGGGTCAGACCCGGGCCCCTGGCCGACCCATACCCACACACATCCCTCATCAGGTGGCTGCGctccaccaccatcaccaccaccctATCCACCACCATCAGTACCCTGACACACCGTCGTCGTCGTCCTCCCCCCAGCAGCCCCCCACCAcccctctgtcctcctcctcctccacagctctgcccCCTGGTGGTCTGGAGCAGCCCTGCTGCTCGGACGGAGACAACGACTCACTCAACTCCACCACCAACTCCAACGAGACAGTCAACTGCAGCTCCGGCTCCTCGTCTCAGGACAGCCTACGGGAGCCTCTGCCACCTCTGGGAAAGCAGACCTACCAGAGAGAAAGCCGCCATAGCTGGGACTCGCCGCCCTTCAACAGTGACGTGGTGCAGAGACGCCAGTACCGCATAGGTCTCAACCTCTTCAACAAGAAGCCAGAGAAAGGGATCCAGTACCTGATAGAGAGAGGTTTTGTATCGGACACTCCAGTTGGGATTGCTCGCTTCATCCTGGAGAGGAAGGGCCTCAGCAGGCAGATGATTGGAGAGTTCCTGGGAAACCGACAGAAACAATTCAACAAAGATGTTTTAGActgtGTCGTGGATGAGATGGACTTCTCAGGAATGGACCTGGATGACGCTCTCAGGAAGTTCCAGGCTCAGATTAAAGTTCAAGGAGAAGCCCAAAAAGTGGAGCGGCTCATAGAGGCTTTTAGTCagagatactgtgtgtgtaatCCAACGCTGGTTCGGCAGTTCCAGAACCCGGACACCATCTTCATCTTGGCCTTTGCCATCATCCTCCTCAACACAGACATGTACAGTCCCAACATCAAAGCTGAGAGGAAGATGAAACTAGAGGATTTCATCAAGAATTTGAGAGGCGTAGACAATGGTCAGGATATACCCAGGGACCTGCTGGTTGGGATCTACCAACGGATACAGAAATGGGAGCTACGGACCAATGATGACCACGTGTCCCAAGTGCAAGCAGTGGAGAGAGTCATTGTGCTGTCCCTTCCCCATCGTAGACTGGTGTGTTGCTGCCAGCTCTATGAGGTCCCTGACCCCAACAGACCTCAGAGGACAGGAGTGCACCAACGAGAAGTCTTCCTCTTTAATGACCTTCTGGTGGTGACCAAAATCTTCCAAAAGAAGAAAACCTCAGTGACTTATAGTTTCAGACAATCTTTCCCTTTGGTTGAGATGCAAGTACACATGTTCCAGAACTCGTACTACCCTCACGGTATCCGCCTGACCTCAGCAGTCCTAGGCGGAGAGATGAAGGTTCTCATTGTCTTTATGGCACCCAGTCAGCAAGACCGCACCCGCTTCGTTAGCGACCTCAGGGAGAGTATTGCTGAAGTGCAAGAGATGGAGAAATATAGAGTGGAATCGGAGTTGGAGAAACAGAAAGGTGTGATGCGGCCCAGCTTGCTCACTGGAGGTGTGGTTGGAGGCGTAGGTGTGAAGAGCGATGTTGTGAATGGCACCATGGGAAGGACAAGTTTTGATGACAACTGCTCAGTGGGTGAGGGTCTCAAACGCACGGCACTCAGCTCATCTCTCAGGGACCTATCGGACACAGGGAAACGTGGTCGCAGGAACAGTGTTGGTTCTCTGGACAGTACCATGGAAGGCTCTATCATTAGCAGCCCACAGCCTCACCAGCGCTATCAAGTGCCAGGCGTGGTACCTGGCTGCTACACAACAGAAGACTTCCGGCCTCACCGCCCCATCCTGAGCCCCGGatcgggggtggggggtgggccGGGGCAGCAACATACCACTGCTGGGACAGGAGTTGGGGGAGTCTCCAGCAGTGTAGAGAGAGCAGGAGCGGGGAGCGGCCCTGgggggagcagcagcagcaacaacaacagcggcTCCTTCCTGGGCTCCCTATTCGGCAGCAAGCGTGCCAAACCACCAGGGCCCCTTATTCCACCGGGGCCACCCTACCCCGCACCTGTACCCCCACCGACTACGGGAGGGCCCCCTCCTCACTCCCCTTCATCGCTGTGCCAGTTGGACGGGGGGCCTTCCAAGATCCAGGCGCTGCACGCACAGTACTGTCACATGGGCACCGTGCAGCCTCCACCACCTTACTACCATCACCATCGCTACCACGTCCAAACTGTCCCTCCTCCTTTGCAAGGGGTGCCCCCTCATACCATACAGAGAGGCCCGCTACCCTGTCGTCCACCGTTCGGCCCCCCACACGGCCAGCACCCGCAGCTGGCCCATCTCTCCCAGCTCTCCCAGCATGGGCTTCCGGGTCGTTACGCCAACATGGTGGTGGgatgtcccccccccctttctcctctctcccaaCATTCCCAGAACCCACAGTTCGCCCTGTACCATGCGCAGCCTACACACTCCATCAGAGGGGTCGGCGTCCCTGGTACCAAACTTCCATTAACCATGTCTCTCTCCCACCCGCACCCCCACGCACACTCCCAAACCCACCCCGGACACGTGCACACACCACACCCAGCCAGCCACTCAACCCACCAAACACATTTTATATTCGGCACTCTGCCCCACAACCTACCCTCCGCCTCCATCAATGCGCATCACGCAGCAGCCGGCGGCCAGTATCTGCCCCAGTACCCTCCTCTTTCttctatcccccccccccaccacactcCCCTTTACCCCCCTTTGTCCCCCCTTACCCCGCTTacacctctctcccctctccccccccagCACCCCGGGCAGCCTCAGCAGGGGCCGCAGGTGACGGGGGCTGGAGCAACAGGTACAGGGGGCAGCTCGAAATCCAAGCCTATCAACCGGATAAGTACCGTGGTGTGAGCAAGATGTGGGGCCccaggggtcagaggtcagatgATAAAGTGGAAGAGGTTGGCAGAGCTAGGTCTAGGACTAAGTCTGCCAGGACAGAAACCAACAGCAGCAGCGCTAGTGACAAGAAGAAACGCAGTTTG
>XM_039800154.1
CAGTGGAGTACCTCCTGGAGCTCAACAACATCATTGAGAGCCAGGCCAAGCTCCTGGAGACCCAGCGCCGGCGCATCGAGGAGCTGGAGGGCCAGCTGGACCAGGTCAGCCAAGAGAACCAGGACCTGAGGCATGATCGCAGCCCACGGACGCCTGCTTCAGACACTCCCGAACAGAACCACAACCATAGCCAGCCTCTGTCCCTCCCCATCCATCACGGCGGTGGCGGTGGCGGTGGCGGTGGCGGTGGCGGCGGCCGGCGGCGGCGGGAACGGTAGCACTTCGACGGCTCAGGCAACAGCTGCATCAACCGCAACTCCAGGGCCCAGCAGGGAGAGGAGGATTCACACCAGGCTGACCCGAGGTCTctcctgcagctcctccaccaaCGAGCGAGACCGGCTCGAACGCACCGACAGCACAGACACCAACGCCAGCTCAACCATACGGAGAAATGTGGAGGGGGATTCCCAGTGTCCAGAGACGGGCACCCACAAAGACAGCTCATTCAGCCAGACATCTTACCTGCGCGGCTCAGAGCGCTACACTGACAGCAGCACCAGCGGCGCACCCTCCGCATCCAGGGACCCTTCATGCGTGTCGGCCTCCAGTTCAGCCAGCCTGGCCTGGGCACTGCGAACTCGCCACCAACCTGCGAGTCTGGCCCTCCGCAagcaagaggaagaggagaacaaGAGATGCAAGGCGCTTTCAGACAGCTATGAACTCTCAACCGATCTGCAGGATAAGAAGGTGGAGATGCTGGAGAGAAAGTACGGTGGCTCCTTTGTAAGTCGCAGAGCAGCTAGGACCATTCAGACGGCTTTCAGACAGTATCGCATGAACAAGAACTTTGAGCGCCTCAGAAGCTCGGCGTCAGAGAGCCGCATGACACGCCGCATCATCCTGTCCAACATGAGACTGCAGTATTCCTTTGATGAGCGACAGCCTCAGCAGCAGGCCCAGACACAGACGAATTTCACCCACAATGTGGCAATAGGGCCTCCTCATTCCCCTATCCCAGAACGCCCAGGAGACTACACCCACTTAGAGGACTCCTTCTCCAAACAGGTCAAGTCCCTAGCTGACTCCATAGACGACGCCCTTACCTGCCGCGCGGGTCGCGATGACTCCCAGGAGGGCAGCAGGGAGGGTGGAGGGATTAGTGAAGACTTTGGGGAGTGCgtgtggagcagcagcagcaatccCTCCTCCCAAAGAGGTTTGGGAGAACGAGCCAGGGGAGCTGGGGGAGGACTCAGTATGCATGGCGACAGTACCGCCACCTCGTACAGTGACGTCACCCTTTACATGGATGATGGCATTCCGTCATCCCCGCTGTCCCTGGATCGGGCACccagcagcacagacacagagTACTGGGGCCCCGGGGGTGGTGTCGGAGGGCGCGAGGACAGCAGGGATACTGAGGGAGGGGGCAGCAGTAACAGTCGGCGCAGCACCCCGTGTACCGAGTGCAGGGACTACCGTCTAAGGGGCGCACATCTGCCTCTCCTCACCATTGAGCCGCCCAGTGACAGCTCAGTGGACACGAGTGACCGCTCAGATCGTGGCTCTCTGAGCAGACAGCTGGTCTATGAGCAGGAGCCTGGGGTAGGGGCTGGCTCCCCTCAGGGAACCCTAAAACACTCCCCCAACACAGGCGCCCGCCCTACCTCCACAGCAGCGGCCCAGGGTCAGACCCGGGCCCCTGGCCGACCCATACCCACACACATCCCTCATCAGGTGGCTGCGctccaccaccatcaccaccaccctATCCACCACCATCAGTACCCTGACACACCGTCGTCGTCGTCCTCCCCCCAGCAGCCCCCCACCAcccctctgtcctcctcctcctccacagctctgcccCCTGGTGGTCTGGAGCAGCCCTGCTGCTCGGACGGAGACAACGACTCACTCAACTCCACCACCAACTCCAACGAGACAGTCAACTGCAGCTCCGGCTCCTCGTCTCAGGACAGCCTACGGGAGCCTCTGCCACCTCTGGGAAAGCAGACCTACCAGAGAGAAAGCCGCCATAGCTGGGACTCGCCGCCCTTCAACAGTGACGTGGTGCAGAGACGCCAGTACCGCATAGGTCTCAACCTCTTCAACAActgtGTCGTGGATGAGATGGACTTCTCAGGAATGGACCTGGATGACGCTCTCAGGAAGTTCCAGGCTCAGATTAAAGTTCAAGGAGAAGCCCAAAAAGTGGAGCGGCTCATAGAGGCTTTTAGTCagagatactgtgtgtgtaatCCAACGCTGGTTCGGCAGTTCCAGAACCCGGACACCATCTTCATCTTGGCCTTTGCCATCATCCTCCTCAACACAGACATGTACAGTCCCAACATCAAAGCTGAGAGGAAGATGAAACTAGAGGATTTCATCAAGAATTTGAGAGGCGTAGACAATGGTCAGGATATACCCAGGGACCTGCTGGTTGGGATCTACCAACGGATACAGAAATGGGAGCTACGGACCAATGATGACCACGTGTCCCAAGTGCAAGCAGTGGAGAGAGTCATTGTGGGCAAGAAGCCTGTGCTGTCCCTTCCCCATCGTAGACTGGTGTGTTGCTGCCAGCTCTATGAGGTCCCTGACCCCAACAGACCTCAGAGGACAGGAGTGCACCAACGAGAAGTCTTCCTCTTTAATGACCTTCTGGTGGTGACCAAAATCTTCCAAAAGAAGAAAACCTCAGTGACTTATAGTTTCAGACAATCTTTCCCTTTGGTTGAGATGCAAGTACACATGTTCCAGAACTCGTACTACCCTCACGGTATCCGCCTGACCTCAGCAGTCCTAGGCGGAGAGATGAAGGTTCTCATTGTCTTTATGGCACCCAGTCAGCAAGACCGCACCCGCTTCGTTAGCGACCTCAGGGAGAGTATTGCTGAAGTGCAAGAGATGGAGAAATATAGAGTGGAATCGGAGTTGGAGAAACAGAAAGGTGTGATGCGGCCCAGCTTGCTCACTGGAGGTGTGGTTGGAGGCGTAGGTGTGAAGAGCGATGTTGTGAATGGCACCATGGGAAGGACAAGTTTTGATGACAACTGCTCAGTGGGTGAGGGTCTCAAACGCACGGCACTCAGCTCATCTCTCAGGGACCTATCGGACACAGGGAAACGTGGTCGCAGGAACAGTGTTGGTTCTCTGGACAGTACCATGGAAGGCTCTATCATTAGCAGCCCACAGCCTCACCAGCGCTATCAAGTGCCAGGCGTGGTACCTGGCTGCTACACAACAGAAGACTTCCGGCCTCACCGCCCCATCCTGAGCCCCGGatcgggggtggggggtgggccGGGGCAGCAACATACCACTGCTGGGACAGGAGTTGGGGGAGTCTCCAGCAGTGTAGAGAGAGCAGGAGCGGGGAGCGGCCCTGgggggagcagcagcagcaacaacaacagcggcTCCTTCCTGGGCTCCCTATTCGGCAGCAAGCGTGCCAAACCACCAGGGCCCCTTATTCCACCGGGGCCACCCTACCCCGCACCTGTACCCCCACCGACTACGGGAGGGCCCCCTCCTCACTCCCCTTCATCGCTGTGCCAGTTGGACGGGGGGCCTTCCAAGATCCAGGCGCTGCACGCACAGTACTGTCACATGGGCACCGTGCAGCCTCCACCACCTTACTACCATCACCATCGCTACCACGTCCAAACTGTCCCTCCTCCTTTGCAAGGGGTGCCCCCTCATACCATACAGAGAGGCCCGCTACCCTGTCGTCCACCGTTCGGCCCCCCACACGGCCAGCACCCGCAGCTGGCCCATCTCTCCCAGCTCTCCCAGCATGGGCTTCCGGGTCGTTACGCCAACATGGTGGTGGgatgtcccccccccctttctcctctctcccaaCATTCCCAGAACCCACAGTTCGCCCTGTACCATGCGCAGCCTACACACTCCATCAGAGGGGTCGGCGTCCCTGGTACCAAACTTCCATTAACCATGTCTCTCTCCCACCCGCACCCCCACGCACACTCCCAAACCCACCCCGGACACGTGCACACACCACACCCAGCCAGCCACTCAACCCACCAAACACATTTTATATTCGGCACTCTGCCCCACAACCTACCCTCCGCCTCCATCAATGCGCATCACGCAGCAGCCGGCGGCCAGTATCTGCCCCAGTACCCTCCTCTTTCttctatcccccccccccaccacactcCCCTTTACCCCCCTTTGTCCCCCCTTACCCCGCTTacacctctctcccctctccccccccagCACCCCGGGCAGCCTCAGCAGGGGCCGCAGGTGACGGGGGCTGGAGCAACAGGTACAGGGGGCAGCTCGAAATCCAAGCCTATCAACCGGATAAGTACCGTGGTGTGAGCAAGATGTGGGGCCccaggggtcagaggtcagatgATAAAGTGGAAGAGGTTGGCAGAGCTAGGTCTAGGACTAAGTCTGCCAGGACAGAAACCAACAGCAGCAGCGCTAGTGACAAGAAGAAACGCAGTTTG

Function

symbol description
iqsec2 Enables guanyl-nucleotide exchange factor activity. Involved in modulation of chemical synaptic transmission and regulation of neurotransmitter receptor localization to postsynaptic specialization membrane. Is active in Schaffer collateral - CA1 synapse. Implicated in non-syndromic X-linked intellectual disability 1.

NR:

description
PREDICTED: IQ motif and SEC7 domain-containing protein 2-like isoform X1

GO: NA

KEGG:

id description
K12495 IQSEC; IQ motif and SEC7 domain-containing protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800152.1 True 4652 mRNA 0.59 14 12561811 12587368
XM_039800154.1 False 4505 mRNA 0.59 13 12561811 12587368

Neighbor

gene id symbol gene type direction distance location
LOC120558783 LOC103354697 coding upstream 5439 12513254 ~ 12556372 (+)
pqbp1 pqbp1 coding upstream 57469 12499369 ~ 12504342 (+)
LOC120558417 NA coding upstream 175538 12381032 ~ 12386273 (+)
rad21l1 NA coding upstream 182114 12368796 ~ 12379697 (+)
opn7d LOC104933009,LOC103354604 coding upstream 197907 12351633 ~ 12363904 (+)
kdm5c kdm5c coding downstream 3539 12590907 ~ 12611168 (+)
LOC120559891 NA coding downstream 59168 12646536 ~ 12650775 (+)
wdr13 wdr13 coding downstream 75107 12662475 ~ 12670394 (+)
tspy LOC103354774 coding downstream 110528 12697896 ~ 12704089 (+)
LOC120559796 LOC104924663,LOC103354782 coding downstream 121275 12708643 ~ 12722596 (+)
G49230 NA non-coding upstream 50233 12510042 ~ 12511578 (+)
G49223 NA non-coding upstream 85786 12474087 ~ 12476025 (+)
G49221 NA non-coding upstream 89539 12470450 ~ 12472272 (+)
G49157 NA non-coding upstream 197370 12364093 ~ 12364441 (+)
G49106 NA non-coding upstream 338757 12220013 ~ 12223054 (+)
G49241 LOC101072313 non-coding downstream 73059 12660427 ~ 12661371 (+)
G49301 gpr173,LOC107086794,LOC102204197,LOC101466594,LOC108231911 non-coding downstream 86974 12674342 ~ 12677678 (+)
LOC120559802 NA non-coding downstream 139232 12726600 ~ 12732417 (+)
G49314 NA non-coding downstream 193247 12780615 ~ 12783788 (+)
G49330 NA non-coding downstream 241213 12828581 ~ 12840565 (+)
G49209 NA other upstream 103372 12452535 ~ 12458439 (+)
si:dkey-70p6.1 LOC100692404,LOC101477341 other upstream 258408 12283427 ~ 12303403 (+)
LOC120559657 LOC102305201 other upstream 307751 12245645 ~ 12254060 (+)
trnae-cuc_14 NA other upstream 338173 12223567 ~ 12223638 (+)
nol4la LOC103354513,LOC100696587 other upstream 351402 12182209 ~ 12210409 (+)
LOC120558314 porcn other downstream 65016 12652384 ~ 12658308 (+)
LOC120559236 LOC103354867 other downstream 207575 12794943 ~ 12844434 (+)
LOC120559134 dvl1 other downstream 273353 12860721 ~ 12886224 (+)
G49538 lmod3 other downstream 945022 13532390 ~ 13534922 (+)
LOC120558697 LOC103355228,LOC101470284,LOC102288766,LOC101062828,LOC100700879,LOC102197182,LOC102790759 other downstream 1071364 13658732 ~ 13724990 (+)

Expression


Co-expression Network