LOC120558882


Basic Information

Item Value
gene id LOC120558882
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 20382206 ~ 20395849 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800209.1
ACTACTCGTAAGTAAACATCAACCACGACTTGGAAAACATACTTCAGCACACCTGTTGAAATTGTACAAGCTGCAGGTGCTAGGATACACTCAAACCGGAATTCTGTTTATCTTTAAATCAAATCTTTAACTTCAAATTACTTTTCCCCAGTCTCCCGTGGTGCTGCTACATTATGTTCTCCGCCAATAAATACCATCAGGACCAAATTAGCTTACTCCACTGCAAATGCAGCAAGCAGCTGCAGATGTCGCCTGCAGCTGTCCATTCTGTCCAGAATGCAGGACCAGGAAAATCTGGTTACTTGAATGGGCCACAAAAGAAATTCAGTGAAGAAGAACAGATGGCTCAGCAGGCCCGCCAAAAGATTCAAGCTCGTCTGAAAATGGCAAAGCTATTTCAGCAATACAGGGCTCAGCTGATCTCCAATAAACATGATGTCACCGTAACCTCAGACCCTCCGTCAAAGGAGGAGAAGATCTGCCTCACTGTGTATGAAAACAAGAAAGTTGTGCCACTCACTGTGAAGAACTGTGGTGTCAAAACGGTCACTTTAACTTTTTGGGCTTTTGACCTCGTGAAGAACATTTTCACTGTCAGAGACTGTCATGGAGACCTTATCCAGACTACGAAGCAACTCCCTCTTGGACCAGGAAAGTCATACAAAATCAAGGTCCATTTCGACTCTGAGCATGCAGGCTTCTATGAACAGTTACTGGTCTTTCAAATTGAATCACACCAGCAGTCCTCAGATAAATTAGAGATTATGCGTATCTTGGAAGTCATACATCGGACATCATTTAATGAAGAGCCCCTCCCTACAGCCACAACCTCAGTGAGCGACCTCCAAACAATGAATTGGACACCTGCTGAAGGTGTTGGATTGACATGGCTTAAGCTTGTGGTGCCTTTGAAGGGTTATCCGATGCCCGATAATATGAAAGACCCCAAGAAAGCTGACATGGACCTGGAAAAGATGCCTCTGAACTGGGGGACCTACTGCCGGAGGTTCCAAATGCTGCTGCATGTGGAGGAGCTCCAGTTGAAGACAGATATTGAGAAATTCAACCAGAATGCGACCATGTGTAGACACAAAAGCAACGCATTCCTTCTCATTCTGCAGCTTGCAGGTGTCTATAAGAACTCACCAATGAGGCTGTTGGGGAACAATGTGCTGGTGACTGCTTTAAACCAGCCAGgagtttttgaaaataaaatatacaatggCTGGGTCCATCATGTGGATGCAGAGCATGTCTACCTGCAGTTCAGTGAAGCGTTCCTGAATTGTTTCAAGGAGGGCACGAGGTACCAATTTAACTTCTATCTCGGCCGTATGCCCCTGCGTATCCAGCATAGAGCAGTGCAGCTGGCATACACGAGCAGACTGAAGGAGGTGCTGTTCCCTACTGGACGATTTTCTTCTCACCATTCACATCTACACAGACTGATAGAACTTGGGGACAACCCAGAGCAGCAAAAGGCGGTTCAACACATTGTAGCTGCTTCCGCAAAACCTGCCCCCTACCTGGTATTTGGTCCACCTGGCAcagGCAAAACAGTGACTTTGGTGGAAGCCATCAGGCGGATAGTGGAAACGCAGCCCTCATGCAACATCCTGGTTTGCGCTCCTTCCAACAGTGCAACTGATCATCTCTTTGAGAAGATTCTGGAAGGAAAGATAGGAGAGCACGAGGTGTATCGCTTGTTCGCCCTAAGCTGCCCTGTGAGAAATATTCCCCAAAATATAAAGTCTTGCTGCAACCTGAACcgcaaaacaaacacacttatGATGCCCCCTAAAGAGGAGCTGATGAAGTATAAGATCATGGCCACCACCCTGCTAACTGCAGGAAGgctAGTGACAGGAGGGATTCCTGTAGCTCATTACACTTATATATTTGTGGATGAGGCAGGCCAGGCTACAGAAACAGAGTGTATCGTCCCTATAGCAGGTTTACTGAAACAGAAATGCCAGTTAGTGCTAGCTGGAGACCCTAAACAGTTAGGCGCCATCATCACATCCAGAGTGGCAGAGAAACATGGCTTGGGTGTGTCCCTGTTGGAGCGTCTGATGAACGATATCAACCTTTacaggtcacatgagacacacgGGTTCAACAACCGTTTTGTAACCAAATTACTGAGGAACTACAGGTCCCATCCTGCAATTCTGAAAATTCCCAATGAGCTCTTTTATAATGGAGAACTTCAGCCTTATGCTCATAAAGAGAAATGCAATTCATACCGCAAATGGGAACACCTGCCCAGAAAAGGTTTCCCTTTGATCTTCCATGGAGTGGCAGGTACCAATGAACGTGACGCCAGCAGCCCCTCTGTTTACAACATGGCAGAGGTGGAGGTGTTGAAGGAATACTTAAAAACTCTCGTTGATCATCTTAAAAGAAAGGGGGTGACCAAAATTCAACCGAGAGAGATTGGCATCATTGCCCCATACAGAAAACAAGTGGAGAAAATCCAGAATGCCCTTAAGACAGACAAAGATCTCATGAAGATAAACTTGGAAAACGTATTGGTTGGTTCAGTGGAGCAGTTTCAGGGTAAAGAGTTCAACGTGATTCTGGTGTCTACGGTGCGCAGCAATCCCAAACTGACTGCACACAAGCAAAGATTCACTATAGGCTTTGTTGATAATGAGAAGAGGTTCAACGTGGCAATGACACGAGCACGAGCCTTGCTGATTGTGGTTGGAGACCCAAGAGTCTTGAAAACTGACAAAATCTGGAACAAATTCATCTATTACTGCTTCCAACAAGGGGCTTACCGTGGCATTATAGTCTCTGatgcagaggaagaggaaagtcCATTGACTGATGTACACTCACCGAGCCTCTGTGAAGAAGGACTCAACAGCAGCTGGACCCCTGTTGAAGGAACCAACAGACCTTGCACACTCATCTCTCTCAGCTCTAGtatttaacataaaaataaagtggTTGAGAAATTGAGAACTAAGTGTGCAGTTTACTCAGGACAGAACTGTCTGTCTTAAAGCATATCtacaattgtattttatttaaattctaCAAAC
>XM_039800210.1
CCTAACCATAAACTAAAACTACTCTCTCCCGTGGTGCTGCTACATTATGTTCTCCGCCAATAAATACCATCAGGACCAAATTAGCTTACTCCACTGCAAATGCAGCAAGCAGCTGCAGATGTCGCCTGCAGCTGTCCATTCTGTCCAGAATGCAGGACCAGGAAAATCTGGTTACTTGAATGGGCCACAAAAGAAATTCAGTGAAGAAGAACAGATGGCTCAGCAGGCCCGCCAAAAGATTCAAGCTCGTCTGAAAATGGCAAAGCTATTTCAGCAATACAGGGCTCAGCTGATCTCCAATAAACATGATGTCACCGTAACCTCAGACCCTCCGTCAAAGGAGGAGAAGATCTGCCTCACTGTGTATGAAAACAAGAAAGTTGTGCCACTCACTGTGAAGAACTGTGGTGTCAAAACGGTCACTTTAACTTTTTGGGCTTTTGACCTCGTGAAGAACATTTTCACTGTCAGAGACTGTCATGGAGACCTTATCCAGACTACGAAGCAACTCCCTCTTGGACCAGGAAAGTCATACAAAATCAAGGTCCATTTCGACTCTGAGCATGCAGGCTTCTATGAACAGTTACTGGTCTTTCAAATTGAATCACACCAGCAGTCCTCAGATAAATTAGAGATTATGCGTATCTTGGAAGTCATACATCGGACATCATTTAATGAAGAGCCCCTCCCTACAGCCACAACCTCAGTGAGCGACCTCCAAACAATGAATTGGACACCTGCTGAAGGTGTTGGATTGACATGGCTTAAGCTTGTGGTGCCTTTGAAGGGTTATCCGATGCCCGATAATATGAAAGACCCCAAGAAAGCTGACATGGACCTGGAAAAGATGCCTCTGAACTGGGGGACCTACTGCCGGAGGTTCCAAATGCTGCTGCATGTGGAGGAGCTCCAGTTGAAGACAGATATTGAGAAATTCAACCAGAATGCGACCATGTGTAGACACAAAAGCAACGCATTCCTTCTCATTCTGCAGCTTGCAGGTGTCTATAAGAACTCACCAATGAGGCTGTTGGGGAACAATGTGCTGGTGACTGCTTTAAACCAGCCAGgagtttttgaaaataaaatatacaatggCTGGGTCCATCATGTGGATGCAGAGCATGTCTACCTGCAGTTCAGTGAAGCGTTCCTGAATTGTTTCAAGGAGGGCACGAGGTACCAATTTAACTTCTATCTCGGCCGTATGCCCCTGCGTATCCAGCATAGAGCAGTGCAGCTGGCATACACGAGCAGACTGAAGGAGGTGCTGTTCCCTACTGGACGATTTTCTTCTCACCATTCACATCTACACAGACTGATAGAACTTGGGGACAACCCAGAGCAGCAAAAGGCGGTTCAACACATTGTAGCTGCTTCCGCAAAACCTGCCCCCTACCTGGTATTTGGTCCACCTGGCAcagGCAAAACAGTGACTTTGGTGGAAGCCATCAGGCGGATAGTGGAAACGCAGCCCTCATGCAACATCCTGGTTTGCGCTCCTTCCAACAGTGCAACTGATCATCTCTTTGAGAAGATTCTGGAAGGAAAGATAGGAGAGCACGAGGTGTATCGCTTGTTCGCCCTAAGCTGCCCTGTGAGAAATATTCCCCAAAATATAAAGTCTTGCTGCAACCTGAACcgcaaaacaaacacacttatGATGCCCCCTAAAGAGGAGCTGATGAAGTATAAGATCATGGCCACCACCCTGCTAACTGCAGGAAGgctAGTGACAGGAGGGATTCCTGTAGCTCATTACACTTATATATTTGTGGATGAGGCAGGCCAGGCTACAGAAACAGAGTGTATCGTCCCTATAGCAGGTTTACTGAAACAGAAATGCCAGTTAGTGCTAGCTGGAGACCCTAAACAGTTAGGCGCCATCATCACATCCAGAGTGGCAGAGAAACATGGCTTGGGTGTGTCCCTGTTGGAGCGTCTGATGAACGATATCAACCTTTacaggtcacatgagacacacgGGTTCAACAACCGTTTTGTAACCAAATTACTGAGGAACTACAGGTCCCATCCTGCAATTCTGAAAATTCCCAATGAGCTCTTTTATAATGGAGAACTTCAGCCTTATGCTCATAAAGAGAAATGCAATTCATACCGCAAATGGGAACACCTGCCCAGAAAAGGTTTCCCTTTGATCTTCCATGGAGTGGCAGGTACCAATGAACGTGACGCCAGCAGCCCCTCTGTTTACAACATGGCAGAGGTGGAGGTGTTGAAGGAATACTTAAAAACTCTCGTTGATCATCTTAAAAGAAAGGGGGTGACCAAAATTCAACCGAGAGAGATTGGCATCATTGCCCCATACAGAAAACAAGTGGAGAAAATCCAGAATGCCCTTAAGACAGACAAAGATCTCATGAAGATAAACTTGGAAAACGTATTGGTTGGTTCAGTGGAGCAGTTTCAGGGTAAAGAGTTCAACGTGATTCTGGTGTCTACGGTGCGCAGCAATCCCAAACTGACTGCACACAAGCAAAGATTCACTATAGGCTTTGTTGATAATGAGAAGAGGTTCAACGTGGCAATGACACGAGCACGAGCCTTGCTGATTGTGGTTGGAGACCCAAGAGTCTTGAAAACTGACAAAATCTGGAACAAATTCATCTATTACTGCTTCCAACAAGGGGCTTACCGTGGCATTATAGTCTCTGatgcagaggaagaggaaagtcCATTGACTGATGTACACTCACCGAGCCTCTGTGAAGAAGGACTCAACAGCAGCTGGACCCCTGTTGAAGGAACCAACAGACCTTGCACACTCATCTCTCTCAGCTCTAGtatttaacataaaaataaagtggTTGAGAAATTGAGAACTAAGTGTGCAGTTTACTCAGGACAGAACTGTCTGTCTTAAAGCATATCtacaattgtattttatttaaattctaCAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800209.1 True 3050 mRNA 0.45 22 20382223 20395849
XM_039800210.1 False 2923 mRNA 0.46 23 20382206 20395849

Neighbor

gene id symbol gene type direction distance location
LOC120558898 LOC104932064,LOC103374062,LOC101476551 coding upstream 13758 20349467 ~ 20368448 (+)
trnaf-gaa_3 NA coding upstream 56965 20325169 ~ 20325241 (+)
LOC120558908 ebp coding upstream 58103 20322245 ~ 20324103 (+)
trnah-gug_9 NA coding upstream 60624 20321511 ~ 20321582 (+)
LOC120558877 NA coding upstream 74937 20292722 ~ 20307269 (+)
LOC120558879 NA coding downstream 1491 20397340 ~ 20409354 (+)
zgc:174906 NA coding downstream 304912 20700761 ~ 20705809 (+)
csad csad coding downstream 310908 20706757 ~ 20712264 (+)
znf740b znf740,LOC100692539,LOC101474992 coding downstream 317533 20713382 ~ 20720457 (+)
nfe2 nfe2,LOC102789365 coding downstream 349706 20745555 ~ 20750691 (+)
G51317 NA non-coding upstream 211087 20157789 ~ 20171119 (+)
G51283 NA non-coding upstream 386090 19995881 ~ 19996116 (+)
G51282 NA non-coding upstream 390013 19990773 ~ 19992193 (+)
G51221 NA non-coding upstream 576913 19778068 ~ 19805293 (+)
G51220 LOC105935863,LOC107390966,LOC108235152 non-coding upstream 580629 19769075 ~ 19801577 (+)
LOC120558477 NA non-coding downstream 265448 20661297 ~ 20662553 (+)
G51386 NA non-coding downstream 355746 20751595 ~ 20752345 (+)
LOC120558354 NA non-coding downstream 376604 20772453 ~ 20779399 (+)
G51625 NA non-coding downstream 824802 21220651 ~ 21222557 (+)
G51685 LOC104932430,LOC103356918,LOC101170587 non-coding downstream 834421 21230270 ~ 21233529 (+)
LOC120558901 LOC104941554,LOC102293999,LOC103360402 other upstream 316471 20063992 ~ 20065735 (+)
zgc:194242 NA other upstream 381768 19996477 ~ 20000438 (+)
LOC120558920 LOC104941542 other upstream 613642 19767626 ~ 19768564 (+)
LOC120558947 lrtm1,LOC102799284 other upstream 918494 19456477 ~ 19463712 (+)
G50983 LOC103366028 other upstream 1695904 18682143 ~ 18686302 (+)
LOC120559772 LOC108235180,LOC102301975,LOC103385136,LOC104941571,LOC107390930,LOC103360973,LOC101475964 other downstream 50122 20445971 ~ 20532569 (+)
G51716 NA other downstream 893739 21289588 ~ 21290962 (+)
G51734 acvr1b,LOC100709886,LOC101485924 other downstream 965441 21361290 ~ 21364430 (+)
G51804 NA other downstream 1163041 21558890 ~ 21559349 (+)
birc5b LOC107086758,LOC102206178,LOC102295711,LOC100709346,LOC106950807,LOC103141143,LOC106920826 other downstream 1321260 21717109 ~ 21720123 (+)

Expression


Co-expression Network