nfe2 (nfe2,LOC102789365)


Basic Information

Item Value
gene id nfe2
gene name nfe2,LOC102789365
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 20745555 ~ 20750691 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800287.1
ggTGTGCATTTGACAAGTGaatacattaaaaatgtattcagtGTTCACCTCTCTGTTGGGGTTTAAGCCACGGTTTCATTTGTGTTTTGAAAACCTTAAATTCGGAAATACAAGTTGGAGATGCTAAaacttaaaagaaaataaataatggcTACTGTGAGAGCTTAACCAAAAGAGTTTAAAGATTACTGCCAACATGTTAGGCACAGGCCTACACCAAATTTTTCAAAGCAGCCACTGGCCCCAGTGTGTCTTGTAGAGAGCACTGTTTTCCCGCAGATTGTCTTATCAGGGGTCGGCATAGCTGCACTCGGGACAGCTGTTGGGAGGAGTCAACTCAACTGAACCCTTCATGTGCTCCAAAAGAACctacacaacacattaacagtcATTTATTTAGCACCAACAGGTCTACAGAtatgtaatgtactgtatgtattagaAATGTGTTTGAAAGCATGGTGTGACTTAACGGTTTTGTATTTCAACTTCCTGATGTGTCAAAGTTTATAGGCTGGGTAGGTGACAATAACTTGCTGTTCTGTGTCATTACCAGGTTAATCTTTTGCAGAAAGAGCCTCTCCTGAATGTGTTCAACAGCCAACTATGTTCTCCCTCTGAGGAGAACCTGTGAGGTATTAGCCACTCCAGGCAGGCTGTGTGGTGGAGTGTCCATGTCAACTAATTTCCCTGGAGCCAGATCTCATGGAGCTCCTCAGGACACAGAGATGGATGTGGCTTGGCAGGAGCTGATGGCCATCACAGAGCTGCAGgAGTTTGAAGTCCCCAGTGAAGGCTCCTATGAAACCACACAGTACCAAACCATGGAGCCCATGGTCCCTATGGGAGGATACGGGATGGCTCAGTCCCATTCTGAGCCTACTCCTGCTGCTTGTGAGCTCGGTACCGCTGACACTTATGACGGATGTTACTCTGAAGAAGTGCCTGTCTGTCATCGCCTAGGCAGCAACGCAGAGGCAATGTATGGACAAGCTCAGCTCAATCAAAGAATGCTCCCCATCTCTTCTCACACACAGCCACCACACATGGCTTTTAGGGAACAGATGAACATGTCGGGTACCAGTCAAGGGCACAGGAGGGCCAACGCTTTTCTCTCTCAGGATCTACGTCGGCACATGCTGTGGACTACACATGGACAAAGTTCACAAGCTCGCTCAGCTGATGATCTAGAGTCAGACTCTGGTCTGTCTCTAGGTTCTAGTCCACCTCTGGCCTCCCCAGATAATCCTGTTGGTGGTGCACCGGGTTGCCAGAGTGTAGACATTGGCATGACATATAGTGATGGTGAACCAGACAGCATGACTGAGCATGCCAGAAGAGCACACATCCATTACTCAATGGACTACCAGAATCAATCTTCCTTGTATTTACACTCAGGTACACAGTCTTCTTTTTCACCCCAACCCACTTTATCTCAGTCACAACCTAATGCTCTGACTCCTCGGGCAGTAAAACAGCAGGGTCTGGCCTCTGCTCTGAGCGACCTGTTCAATGACTCTGGAGCGTCCAGCAGAGGGAGCTCACAACATAACATGTATATAAAGCCACAAGGAAGTAACTCCACTCCAGGTCCACTGAGCCGAGATGAGAGGCGGGCCATGTCGTTGAAAATTCCCTTCCCCACAGAGAAGATTATCAATCTACCTGTGGATGACTTCAACGAACTCCTGACGCAGTATACTCTGACAGATAATCAACTAGCACTGGTGAGGGACATTAGACGAAGAGGGAAGAACAAAGTTGCGGCTCAGAACTGCAGGAAGAGGAAGCTTGAGAGCATAATTCACCTTGAAAGAGAACTGAACGAGCTGCAGGCCCAAAGAGAGCACCTGGCACAGGAAAGGCTTGAGTTCCAGCGCAGCTTGGGTTTTATTAAGTGTCGCCTTACAGGCCTCTATTCAGAAGTATTTTCTCACTTAAGGGATGAAAACGGACAGCCATACTCAATAGATGAATACGCCCTACAACAGACACCCGATGGTAAAATTTATTTAGTACCTCACACAACTATGCAAAAGAGAGAGCAATGCTAAACAAGTGGGGATAGTCTTATTATTTAATACCCTTACAGAAGGTATACTGTCTGTGCCGAATGAAAGCATATCAACTGGAAGTTACATTTTCATGTAGTTATGACTTTAACATGCATCAATAAACACAAATGCTCTTACAATTGACTGGAACCACACCTGAGTACCtttaaaaaatactttattaaaaaaacat
>XM_039800288.1
aggTGTGCATTTGACAAGTGaatacattaaaaatgtattcagtGTTCACCTCTCTGTTGGGGTTTAAGCCACGGTTTCATTTGTGTTTTGAAAACCTTAAATTCGGAAATACAAGTTGGAGATGCTAAaacttaaaagaaaataaataatggcTACTGTGAGAGCTTAACCAAAAGAGTTTAAAGATTACTGCCAACATGTTAGGCACAGGCCTACACCAAATTTTTCAAAGCAGCCACTGGCCCCAGTGTGTCTTGTAGAGAGCACTGTTTTCCCGCAGATTGTCTTATCAGGGGTCGGCATAGCTGCACTCGGGACAGCTGTTGGGAGGAGTCAACTCAACTGAACCCTTCATGTGCTCCAAAAGAACctacacaacacattaacagtcATTTATTTAGCACCAACAGGTCTACAGAtatgtaatgtactGTTAATCTTTTGCAGAAAGAGCCTCTCCTGAATGTGTTCAACAGCCAACTATGTTCTCCCTCTGAGGAGAACCTGTGAGGTATTAGCCACTCCAGGCAGGCTGTGTGGTGGAGTGTCCATGTCAACTAATTTCCCTGGAGCCAGATCTCATGGAGCTCCTCAGGACACAGAGATGGATGTGGCTTGGCAGGAGCTGATGGCCATCACAGAGCTGCAGgAGTTTGAAGTCCCCAGTGAAGGCTCCTATGAAACCACACAGTACCAAACCATGGAGCCCATGGTCCCTATGGGAGGATACGGGATGGCTCAGTCCCATTCTGAGCCTACTCCTGCTGCTTGTGAGCTCGGTACCGCTGACACTTATGACGGATGTTACTCTGAAGAAGTGCCTGTCTGTCATCGCCTAGGCAGCAACGCAGAGGCAATGTATGGACAAGCTCAGCTCAATCAAAGAATGCTCCCCATCTCTTCTCACACACAGCCACCACACATGGCTTTTAGGGAACAGATGAACATGTCGGGTACCAGTCAAGGGCACAGGAGGGCCAACGCTTTTCTCTCTCAGGATCTACGTCGGCACATGCTGTGGACTACACATGGACAAAGTTCACAAGCTCGCTCAGCTGATGATCTAGAGTCAGACTCTGGTCTGTCTCTAGGTTCTAGTCCACCTCTGGCCTCCCCAGATAATCCTGTTGGTGGTGCACCGGGTTGCCAGAGTGTAGACATTGGCATGACATATAGTGATGGTGAACCAGACAGCATGACTGAGCATGCCAGAAGAGCACACATCCATTACTCAATGGACTACCAGAATCAATCTTCCTTGTATTTACACTCAGGTACACAGTCTTCTTTTTCACCCCAACCCACTTTATCTCAGTCACAACCTAATGCTCTGACTCCTCGGGCAGTAAAACAGCAGGGTCTGGCCTCTGCTCTGAGCGACCTGTTCAATGACTCTGGAGCGTCCAGCAGAGGGAGCTCACAACATAACATGTATATAAAGCCACAAGGAAGTAACTCCACTCCAGGTCCACTGAGCCGAGATGAGAGGCGGGCCATGTCGTTGAAAATTCCCTTCCCCACAGAGAAGATTATCAATCTACCTGTGGATGACTTCAACGAACTCCTGACGCAGTATACTCTGACAGATAATCAACTAGCACTGGTGAGGGACATTAGACGAAGAGGGAAGAACAAAGTTGCGGCTCAGAACTGCAGGAAGAGGAAGCTTGAGAGCATAATTCACCTTGAAAGAGAACTGAACGAGCTGCAGGCCCAAAGAGAGCACCTGGCACAGGAAAGGCTTGAGTTCCAGCGCAGCTTGGGTTTTATTAAGTGTCGCCTTACAGGCCTCTATTCAGAAGTATTTTCTCACTTAAGGGATGAAAACGGACAGCCATACTCAATAGATGAATACGCCCTACAACAGACACCCGATGGTAAAATTTATTTAGTACCTCACACAACTATGCAAAAGAGAGAGCAATGCTAAACAAGTGGGGATAGTCTTATTATTTAATACCCTTACAGAAGGTATACTGTCTGTGCCGAATGAAAGCATATCAACTGGAAGTTACATTTTCATGTAGTTATGACTTTAACATGCATCAATAAACACAAATGCTCTTACAATTGACTGGAACCACACCTGAGTACCtttaaaaaatactttattaaaaaaacat
>XM_039800289.1
GCACAGAGCCATCCCATTTATGCCGCTGGCTGTATGTGTAGctgaacagaaagaaaaagacagttGAGATAGAGCAAGAGGCCTAGAGTGTTTTACTTCTTGTGATCTGTTAAATGTCAGCAACAGCACAACATACTGTGTGAAAAAGAACAGCTCtctttttactattttttttctttttcttaccaCCAGGATTGTGCTTCACatctgaagattttttttttttattgattttttttctccactcaTCACCTGTTGAAGAAGCAGAGAATGTTGCTCAGGTTAATCTTTTGCAGAAAGAGCCTCTCCTGAATGTGTTCAACAGCCAACTATGTTCTCCCTCTGAGGAGAACCTGTGAGGTATTAGCCACTCCAGGCAGGCTGTGTGGTGGAGTGTCCATGTCAACTAATTTCCCTGGAGCCAGATCTCATGGAGCTCCTCAGGACACAGAGATGGATGTGGCTTGGCAGGAGCTGATGGCCATCACAGAGCTGCAGgAGTTTGAAGTCCCCAGTGAAGGCTCCTATGAAACCACACAGTACCAAACCATGGAGCCCATGGTCCCTATGGGAGGATACGGGATGGCTCAGTCCCATTCTGAGCCTACTCCTGCTGCTTGTGAGCTCGGTACCGCTGACACTTATGACGGATGTTACTCTGAAGAAGTGCCTGTCTGTCATCGCCTAGGCAGCAACGCAGAGGCAATGTATGGACAAGCTCAGCTCAATCAAAGAATGCTCCCCATCTCTTCTCACACACAGCCACCACACATGGCTTTTAGGGAACAGATGAACATGTCGGGTACCAGTCAAGGGCACAGGAGGGCCAACGCTTTTCTCTCTCAGGATCTACGTCGGCACATGCTGTGGACTACACATGGACAAAGTTCACAAGCTCGCTCAGCTGATGATCTAGAGTCAGACTCTGGTCTGTCTCTAGGTTCTAGTCCACCTCTGGCCTCCCCAGATAATCCTGTTGGTGGTGCACCGGGTTGCCAGAGTGTAGACATTGGCATGACATATAGTGATGGTGAACCAGACAGCATGACTGAGCATGCCAGAAGAGCACACATCCATTACTCAATGGACTACCAGAATCAATCTTCCTTGTATTTACACTCAGGTACACAGTCTTCTTTTTCACCCCAACCCACTTTATCTCAGTCACAACCTAATGCTCTGACTCCTCGGGCAGTAAAACAGCAGGGTCTGGCCTCTGCTCTGAGCGACCTGTTCAATGACTCTGGAGCGTCCAGCAGAGGGAGCTCACAACATAACATGTATATAAAGCCACAAGGAAGTAACTCCACTCCAGGTCCACTGAGCCGAGATGAGAGGCGGGCCATGTCGTTGAAAATTCCCTTCCCCACAGAGAAGATTATCAATCTACCTGTGGATGACTTCAACGAACTCCTGACGCAGTATACTCTGACAGATAATCAACTAGCACTGGTGAGGGACATTAGACGAAGAGGGAAGAACAAAGTTGCGGCTCAGAACTGCAGGAAGAGGAAGCTTGAGAGCATAATTCACCTTGAAAGAGAACTGAACGAGCTGCAGGCCCAAAGAGAGCACCTGGCACAGGAAAGGCTTGAGTTCCAGCGCAGCTTGGGTTTTATTAAGTGTCGCCTTACAGGCCTCTATTCAGAAGTATTTTCTCACTTAAGGGATGAAAACGGACAGCCATACTCAATAGATGAATACGCCCTACAACAGACACCCGATGGTAAAATTTATTTAGTACCTCACACAACTATGCAAAAGAGAGAGCAATGCTAAACAAGTGGGGATAGTCTTATTATTTAATACCCTTACAGAAGGTATACTGTCTGTGCCGAATGAAAGCATATCAACTGGAAGTTACATTTTCATGTAGTTATGACTTTAACATGCATCAATAAACACAAATGCTCTTACAATTGACTGGAACCACACCTGAGTACCtttaaaaaatactttattaaaaaaacat

Function

symbol description
nfe2 Enables protein heterodimerization activity. Contributes to sequence-specific DNA binding activity. Acts upstream of or within several processes, including otic vesicle morphogenesis; regulation of primitive erythrocyte differentiation; and swim bladder inflation. Part of transcription regulator complex. Is expressed in blood; otic placode; otic vesicle; ventral mesenchyme; and ventral mesoderm. Orthologous to human NFE2 (nuclear factor, erythroid 2).

NR:

description
transcription factor NF-E2 45 kDa subunit

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0005634 nucleus cellular_component
GO:0005667 transcription regulator complex cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function
GO:0046982 protein heterodimerization activity molecular_function

KEGG:

id description
K09039 NFE2; nuclear factor erythroid 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800287.1 True 2247 mRNA 0.46 3 20747189 20750691
XM_039800288.1 False 2123 mRNA 0.46 4 20747188 20750691
XM_039800289.1 False 1972 mRNA 0.46 4 20745555 20750691

Neighbor

gene id symbol gene type direction distance location
znf740b znf740,LOC100692539,LOC101474992 coding upstream 25098 20713382 ~ 20720457 (+)
csad csad coding upstream 33291 20706757 ~ 20712264 (+)
zgc:174906 NA coding upstream 39746 20700761 ~ 20705809 (+)
LOC120558879 NA coding upstream 336201 20397340 ~ 20409354 (+)
LOC120558882 NA coding upstream 349706 20382206 ~ 20395849 (+)
cbx5 cbx5 coding downstream 4362 20755053 ~ 20759445 (+)
calcoco1a calcoco1 coding downstream 198611 20949302 ~ 20960825 (+)
nr1d4a LOC100709437,LOC104956893,LOC101468893,LOC102785086,LOC102309972 coding downstream 256860 21007551 ~ 21019292 (+)
mfsd5 mfsd5,LOC102784782 coding downstream 269814 21020505 ~ 21023161 (+)
LOC120558837 faim2,LOC102311007,LOC103362048,LOC102784507 coding downstream 274449 21025140 ~ 21031195 (+)
LOC120558477 NA non-coding upstream 83002 20661297 ~ 20662553 (+)
G51317 NA non-coding upstream 574436 20157789 ~ 20171119 (+)
G51283 NA non-coding upstream 749439 19995881 ~ 19996116 (+)
G51282 NA non-coding upstream 753362 19990773 ~ 19992193 (+)
G51221 NA non-coding upstream 940262 19778068 ~ 19805293 (+)
G51386 NA non-coding downstream 904 20751595 ~ 20752345 (+)
LOC120558354 NA non-coding downstream 21762 20772453 ~ 20779399 (+)
G51625 NA non-coding downstream 469960 21220651 ~ 21222557 (+)
G51685 LOC104932430,LOC103356918,LOC101170587 non-coding downstream 479579 21230270 ~ 21233529 (+)
LOC120559383 LOC106096427,LOC103356912,LOC102781035,LOC101487100 non-coding downstream 527085 21277776 ~ 21288705 (+)
LOC120559772 LOC108235180,LOC102301975,LOC103385136,LOC104941571,LOC107390930,LOC103360973,LOC101475964 other upstream 212986 20445971 ~ 20532569 (+)
LOC120558901 LOC104941554,LOC102293999,LOC103360402 other upstream 679820 20063992 ~ 20065735 (+)
zgc:194242 NA other upstream 745117 19996477 ~ 20000438 (+)
LOC120558920 LOC104941542 other upstream 976991 19767626 ~ 19768564 (+)
LOC120558947 lrtm1,LOC102799284 other upstream 1281843 19456477 ~ 19463712 (+)
G51716 NA other downstream 538897 21289588 ~ 21290962 (+)
G51734 acvr1b,LOC100709886,LOC101485924 other downstream 610599 21361290 ~ 21364430 (+)
G51804 NA other downstream 808199 21558890 ~ 21559349 (+)
birc5b LOC107086758,LOC102206178,LOC102295711,LOC100709346,LOC106950807,LOC103141143,LOC106920826 other downstream 966418 21717109 ~ 21720123 (+)
LOC120559721 cacna1s,LOC103368470 other downstream 1032526 21783217 ~ 21807914 (+)

Expression


Co-expression Network