pfdn4 (pfdn4)


Basic Information

Item Value
gene id pfdn4
gene name pfdn4
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 9200752 ~ 9210559 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800356.1
TCATCTTTGACTGTCATTCTGTAAAGGGTTTCCGCCCCGCTAGGTGGCGATGAGGCCATACTGTTCTGTGGAGTAACTGCAGTCTATGTGCAGTCGAGGAAGCCGAGATGGCAGCCACCATGAAGGGACCTGGAGTTGAAGATGTGAATGTTACTTTTGAAGACCAACAGAAGATCAATAAATTTGCCAGGAACACGAGTCGGATGACCGAGCTGAAAAATGAAATTGAGGCAAAGAAAAAATCGCTGCAGAACTTACAGGATGCCAGCGATGACCTAATGATGTTAGACGACGACTCTCTGTTGATCCCATATCAAATCGGCGATGTCTTTGTCAGTCACAGTCAGGAAGAAACGCAAGAGATGCTGGAGGCCGCAAAGGAAACACTGGAGCAGGAGGTCAAAGGCCTTGAGGAACGAGTGTCAGCGATACAGCAAGTATTGGGTGATCTGAAGGTCCACCTCTATGCCAAGTTTGGTAACAACATTAACCTGGAGGCAGACGAAAGCTGAGCTGAGAAATGGACACTGACAAGCTGCCCCAACACGGACTTTTTCACCCAGCTCTCGTATCACATCCACCGAGTGTTTGCCAAACAAAAACGTCCAGTAGGACTCGGCACGGACGGCTTAGATTTGCAGCTTCTGGCTTTTGTTTGCACCTATGTTGTATGATTCTTCAGTTAAGATTTTGGCAAACCAATTCACAAGGACAACAAAGATTTGGAGACTAAATAAATGCCCATCATTTCTAACGTC

Function

symbol description
pfdn4 Predicted to enable unfolded protein binding activity. Predicted to act upstream of or within protein folding. Predicted to be part of prefoldin complex. Predicted to be active in cytoplasm. Orthologous to human PFDN4 (prefoldin subunit 4).

NR:

description
PREDICTED: prefoldin subunit 4

GO: NA

KEGG:

id description
K09550 PFDN4; prefoldin subunit 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800356.1 True 758 mRNA 0.47 4 9200752 9210559

Neighbor

gene id symbol gene type direction distance location
LOC120559286 NA coding upstream 546436 8645778 ~ 8654316 (+)
itih6 itih6 coding upstream 567927 8605863 ~ 8632825 (+)
LOC120559284 pfkfb1,LOC100700435,LOC101066702 coding upstream 594994 8562053 ~ 8605758 (+)
LOC120559288 NA coding upstream 630421 8569081 ~ 8570331 (+)
LOC120559290 NA coding upstream 639669 8558038 ~ 8561083 (+)
LOC120558451 LOC100703402 coding downstream 23601 9234160 ~ 9236016 (+)
cd40 NA coding downstream 147413 9357972 ~ 9366078 (+)
zbtb48 LOC102780700 coding downstream 324848 9535407 ~ 9544237 (+)
syt6a syt6,LOC103150978,LOC106928401,LOC103467834 coding downstream 387067 9597626 ~ 9689330 (+)
sdf4 sdf4 coding downstream 543510 9754069 ~ 9761924 (+)
G48269 NA non-coding upstream 8543 9189378 ~ 9192209 (+)
G48264 NA non-coding upstream 17604 9180563 ~ 9183148 (+)
G48259 NA non-coding upstream 73738 9126810 ~ 9127014 (+)
G48206 NA non-coding upstream 349579 8843909 ~ 8851173 (+)
G48205 NA non-coding upstream 374076 8826458 ~ 8826676 (+)
G48294 NA non-coding downstream 32795 9243354 ~ 9256285 (+)
G48310 NA non-coding downstream 76500 9287059 ~ 9287662 (+)
LOC120559475 NA non-coding downstream 90795 9301354 ~ 9345114 (+)
G48338 NA non-coding downstream 157326 9367885 ~ 9381444 (+)
G48369 NA non-coding downstream 310199 9520758 ~ 9521651 (+)
LOC120559255 tshz2 other upstream 78840 8990487 ~ 9121912 (+)
G48162 NA other upstream 474200 8716767 ~ 8726552 (+)
G48077 NA other upstream 512788 8680282 ~ 8687964 (+)
LOC120559293 pifo other upstream 537861 8654412 ~ 8662891 (+)
LOC120559763 NA other upstream 703358 8478123 ~ 8497394 (+)
G48347 NA other downstream 193665 9404224 ~ 9429947 (+)
ubxn10 NA other downstream 712041 9922600 ~ 9925081 (+)
agmat agmat,LOC102790280 other downstream 929039 10139598 ~ 10151251 (+)
G48640 NA other downstream 1403472 10614031 ~ 10750428 (+)
G48752 NA other downstream 1962036 11172595 ~ 11173654 (+)

Expression


Co-expression Network