LOC120559027


Basic Information

Item Value
gene id LOC120559027
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 28420529 ~ 28442383 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800451.1
ggCAAAGGCAGTCCTTGATCCAGCATAACAGCCTACAGGTGTGTCTCTTCCAGCCAGCTTCTGTCTTACTTCACCTCAGACCGGATCTTCTAAAACCATGCTCTGCTTCACACTCAGCACCACACTGTTGCTGGCAGCGACGTGTTCGCTCATGACAGCAGTTGTCTCCCTAGAGAAAGCTACCACCTGTGGCAGCGACTGGAATGTCCAGCGCCTGAGCTGTGATGACGGAGTGATCAGTGTGCAGACAGCACTGTATGGACGTGCAGACGCTGTGACCTGCAGTGAGGGAAGACCTCCGGCACAGCTCTCCAATACACACTGCTCTCAAGCTGGCACAGTGGACGTTGTCAAGCAAAGGTGTGATGGCAAGAGGGAGTGTGAACTAAACATCAATGTTTTTTATACCTCTGATCCCTGCTATGGCACCTACAAATACCTGAACACCACATACACCTGCCTCCCAGCAACTCACCTTGTTGCCTGTCAGGGCTCTTTGGCGCAACTCCAGTGTGATCAAGGACAGGTTATATCTGTGAATGCTACAAACTATGGACGTCGTGACCAGACCACCTGCATTTACCAACGGCCTCTCTATCAAATTCGAAATAACGGCTGGCGAAGCCCCACACCCCAAGTTGCTGCCAGCTGTAATGGACAAAACAGCTGTACCATCGCAGCAAGCAACTCTGTGTTTGGAGACCCCTGTTATGGCACTTACAAGTATCTGGAGGTGGCTTACACATGTGACCATCCTGGGAATTCTCCGCTTCCATATATAATTCGTGCAGCTAAGAAGAGGAAACACATCGTTCCCCTGAGACCGCACAGTCCCGGAAGTCTAAAAGGATGCCACGGGCGTCTGCGGTCCATTTTTGGTTGGGCTTCTGCGGAGAAACTTCTTTTCACCAAGAAGGTGTTGGAATTTGGCTTGACTGTGCAGTGTTTGCTCTGCTCTGAGCCAGACCGGCACCCTCCTCTCCTGGAGAAGCTCGCCATTCAGCGACAGTGGTTGGCAGAGAGGCCTTGGCCCGCTACTTTGCCAGCTTCCCCAGAACTCTTGGGAGACTGCTCAGACGCTACCCTGCGTCTTCACGGGACCCGTGGAGGCGTGGCGAGGGCGTCGCTCTTCAGCCATCCCAATCCACGTGCCTGTGGCTCACAGCCCGTCAGGCCCGCCCCACTGCAGCCCGGTCGCGCGTTCCAGTCGCCACGCAGCCCGCCTGCACAGCTGGTGCGTGTTCCTGCGCGTTGGCTGATGCGTTCCTGTGGTGTGCAGTCtcctgctctggtccctGCTGACCGTTGCTTCCCGGCCCGGGGTTTCAGCTCATTGCCTGCAGGTGGGGGTGCCCGCCGGCCAGGGGTTCGGCCGCCGCCGGCGAGGTCTCGTGTTTCCCGTGCCCGGTTCTTTCGTTTTCCCCCTTGGACCCCCTCCGACTCCCCCTCCTACGTGGTTTTTTTGATTTGGGTCGTCCCTCCTCCGGCCCCTCCGCCCTCCCTGGAACAGCCTACAGGTGTGTCTCTTCCAGCCAGCTTCTGTCTTACTTCACCTCAGACCGGATCTTCTAAAACCATGCTCTGCTTCACACTCAGCACCACACTGTTGCTGGCAGCAACGTGTTCGCTCATGACAGCAGTTGTCTCCCTAGAGAAAGCTACCACCTGTGGCAGCGACTGGAATGTCCAGCGCCTGAGCTGTGATGACGGAGTGATCAGTGTGCAGACAGCACTGTATGGACGTGCAGACGCTGTGACCTGCAGTGAGGGAAGACCTCCGGCACAGCTCTCCAATACACACTGCTCTCAAGCTGGCACAGTGGACGTTGTCAAGCAAAGGTGTGATGGCAAGAGGGAGTGTGAACTAAACATCAATGTTTTTTATACCTCTGATCCCTGCTATGGCACCTACAAATACCTGAACACCACATACACCTGCCTCCCAGCAATTCACCTTGTTGCCTGTGAGGGCTCTTTGGCACAACTCCAGTGTGATCAAGGACAGGTTATATCTGTGAATGCTACAAACTATGGACGTCGTGACCAGACCACCTGCATTTACCAACGGCCTCTCTATCAAATTCAAAATAACGGCTGCATAAGCCCCACACTCCAAGTTGCTGCCAGCTGTAATGGATTTAACAGCTGTACCATTGCAGCAAACAACTCTGTGTTTGGAGACCCCTGCGGCGGCACCTACAAGTATCTGGAGGTGGCTTACACATGTTACTATCCTGAGAGTTCTCTGCTTCCATAGTTTACCCATGTAGGCATACTGATGTTTCACTTATATCACAATAAACATGCATTCAATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800451.1 True 2318 mRNA 0.54 23 28420529 28442383

Neighbor

gene id symbol gene type direction distance location
LOC120558753 NA coding upstream 21448 28390403 ~ 28399081 (+)
LOC120559025 NA coding upstream 43358 28363176 ~ 28377171 (+)
soga1 NA coding upstream 116251 28199573 ~ 28304278 (+)
trnar-ccu_2 NA coding upstream 627965 27792492 ~ 27792564 (+)
trnar-ccu_1 NA coding upstream 657092 27763365 ~ 27763437 (+)
cep104 cep104 coding downstream 16778 28459161 ~ 28500476 (+)
c5h1orf174 NA coding downstream 62103 28504486 ~ 28508540 (+)
nphp4 nphp4 coding downstream 69664 28512047 ~ 28697909 (+)
cfap74 cfap74 coding downstream 740943 29183326 ~ 29245568 (+)
gnb1a gnb1,ol-gb1,gnb1a,LOC107385217,LOC103044197 coding downstream 808591 29250974 ~ 29294158 (+)
G53770 NA non-coding upstream 95596 28324728 ~ 28324933 (+)
G53734 NA non-coding upstream 223773 28196546 ~ 28196756 (+)
G53696 NA non-coding upstream 262596 28156713 ~ 28157933 (+)
G53681 NA non-coding upstream 474674 27945651 ~ 27945855 (+)
G53649 LOC102314191,LOC102208045,LOC101465377,LOC102783560 non-coding upstream 565388 27853478 ~ 27855141 (+)
LOC120558758 NA non-coding downstream 4059 28446442 ~ 28454275 (+)
G53782 LOC103356136,LOC104946517,LOC101486029 non-coding downstream 58204 28500587 ~ 28502913 (+)
G53884 NA non-coding downstream 513177 28955560 ~ 28955816 (+)
G53885 NA non-coding downstream 522253 28964636 ~ 28970345 (+)
G53897 NA non-coding downstream 663411 29105794 ~ 29106722 (+)
LOC120558754 NA other upstream 4782 28407271 ~ 28415747 (+)
G53775 NA other upstream 74613 28341922 ~ 28345916 (+)
casp9 LOC104954971 other upstream 97750 28319637 ~ 28322779 (+)
bsna bsn,LOC102782891,LOC106513106 other upstream 276728 27954399 ~ 28143801 (+)
LOC120559343 NA other upstream 825120 27585525 ~ 27595409 (+)
nadka nadk other downstream 854221 29296604 ~ 29323242 (+)
plekhm2 plekhm2 other downstream 1081640 29524023 ~ 29545886 (+)
ano11 ano7l1,LOC102309663,LOC103367289,LOC103384790 other downstream 1106361 29548744 ~ 29567773 (+)
G54103 LOC103366252 other downstream 1310063 29752446 ~ 29758010 (+)
szrd1 LOC103366254,LOC108233026,LOC106518923,LOC101072016,LOC107390353 other downstream 1327469 29769852 ~ 29782937 (+)

Expression


Co-expression Network