LOC120559099


Basic Information

Item Value
gene id LOC120559099
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 4266875 ~ 4281526 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800532.1
ACACACCCTGCACAGTACGGGCAAACTGCTTTACAACAGACACCAGAGGCTCACACTAACTTACAGGGAGTCAAATGGATTTTCTGAAGCAGGCTGAAGAAATTGCCTCCACTGCCAAATTTGGAGACTTGATAGAATTTTCCTACCCTATCGGATACTCACACTGGGGAGTGTACGTTGAAGATGGTAATGTAATCCATTTTGCTGTTGCAGATCAGGGGCAACTGATGAGCAGCATACGTTCTTCCTTACAAGCAATCTTCCCTGTATGTGGTGACCTTCTTCTTGGGGAGACCAAGATCCGCAGAGTGCCTCTTTGTGAGGTGAATGTCCCGAAAGGAACTCATGCCCTGATCAGTAACAACCGCCATGCCTTCACACCATCAGCACCTGAGGATATGAGGCTACGGTGCGATGCCCTTCTTGATAAGGAATTCCCATATCATCTTTTCACTCTCAACTGCGAGCACTTTGCCACTTTTGTACGCTATGGAAAGGCTGTGTGCAACCAGATTCCTACAAGACCCAAGAATGTAGAGTGTGTGAAGGCAACTGCAACCTTCAAAGACATTGTCAGTGCCAAAGAAACTGCTCAAGACCATTTTGAATGAGCCCCCTGACTATCTATTTTAACACATGGAATTCTATTACTTCATTCAataactaattaaaaaaaaccttttcattTATTGTGCATCAAGATTTTGCAATCaaataaacaaactaaaaacaaacaacatagtCTCATTCAAACAGTACAAGTCTAGATGGATACAGTCATTTGGAAGAAATGTTGTTGATTTTTTAGAATTATACACTGAACACTGAGATTTTAACAATTTCCAATTTATCCATCATTTAAACAAGGTAACACTGTGTCATCAGCAAAAAGCCCAGGAGTTACAGAGAGGGAGGTAGTTATCCTGCTTCAGTATCGGTAGATGCTTTTATTATCCTTTAAATAATGAATGAAATCAATTGTTTATTTAAGTGTTACAGAAGCATTTTCAGAAATAATTGTATGATGTGGTCTTCAACGACTCTGTGAAAGAAGAGCAAACGACACAACCTAAACTAACCTACTCAGTCACAGCTTTAAGTGAGCAGCTATGTTgcacaaagaaataaaagctaCTATTTCTGAGAACTCAAATTacctaaaaaaaatcctttatcagATCCCACAGAATAACAGCCCTGACCAATCGATACCTGATAGGTCTGCAATTTCTGGTCACAGGCCTTTTGATCTCTTTCTCGCATCTCTGTCTGCCCTCCAGACAtttatgataataaaataatgtgtGAAACTGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800532.1 True 1315 mRNA 0.40 4 4266875 4281526

Neighbor

gene id symbol gene type direction distance location
LOC120558381 LOC100699862,LOC103374679,LOC104941073 coding upstream 8304 4254640 ~ 4258571 (+)
LOC120559787 LOC103357833 coding upstream 86539 4084694 ~ 4180336 (+)
mfn2 mfn2 coding upstream 207162 4030523 ~ 4059713 (+)
LOC120558402 LOC103357835,LOC104954328 coding upstream 252274 4005265 ~ 4014601 (+)
LOC120558400 NA coding upstream 284594 3958556 ~ 3982281 (+)
LOC120558632 LOC101473708,LOC108431628,LOC107592856 coding downstream 149862 4431388 ~ 4587064 (+)
LOC120558307 NA coding downstream 1094777 5376303 ~ 5387260 (+)
npbwr2b LOC103358254,LOC104941021 coding downstream 1465683 5747209 ~ 5750232 (+)
oprl1 oprl1 coding downstream 1782324 6063850 ~ 6234843 (+)
LOC120559680 fam187b,LOC104965325,LOC102795245 coding downstream 1980497 6262023 ~ 6272680 (+)
LOC120558383 NA non-coding upstream 2243 4258819 ~ 4264632 (+)
G47113 NA non-coding upstream 191975 4074028 ~ 4074900 (+)
G47076 NA non-coding upstream 210912 4055674 ~ 4055963 (+)
G47062 NA non-coding upstream 247796 4015192 ~ 4019079 (+)
G47045 NA non-coding upstream 331285 3934329 ~ 3935590 (+)
LOC120558318 NA non-coding downstream 377940 4659466 ~ 4666871 (+)
LOC120559518 NA non-coding downstream 480863 4762389 ~ 4766774 (+)
LOC120559496 NA non-coding downstream 487754 4769280 ~ 4772306 (+)
G47276 NA non-coding downstream 496591 4778117 ~ 4778555 (+)
LOC120559638 NA non-coding downstream 576742 4858268 ~ 4858785 (+)
gpr173 LOC104932793,LOC101475032,LOC100694027,LOC104957049 other upstream 401077 3843064 ~ 3865798 (+)
LOC120559404 NA other upstream 752117 3448104 ~ 3514758 (+)
LOC120559414 NA other upstream 962238 3279361 ~ 3304637 (+)
LOC120559392 NA other upstream 978786 3146481 ~ 3288089 (+)
G46574 NA other upstream 1496422 2745898 ~ 2770453 (+)
LOC120559501 NA other downstream 491406 4772932 ~ 4775358 (+)
G47444 NA other downstream 1917520 6199046 ~ 6200594 (+)
ccm2l ccm2l,LOC102778549 other downstream 2416467 6697993 ~ 6720932 (+)
G47903 LOC104965021 other downstream 3830915 8112441 ~ 8116228 (+)
pkig pkig other downstream 4061224 8342750 ~ 8380578 (+)

Expression


Co-expression Network