LOC120559133 (mxra8)


Basic Information

Item Value
gene id LOC120559133
gene name mxra8
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 12848812 ~ 12859392 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800616.1
GGAACACAAcagcacacagctgagccgTGCTGAGCCGTGCTCCGTCAACCTCAACACTTCTGGTCTTCTATCGGTTTCTGCGCACACCACCTCTGACAGGCTTTTACCTCCGCTGCCAGCACTGCGAAAAAAAAGATGCAGCTCGTCATGACTCTCCTTCAGATTgttgctgtgcttttcctgccaGGAGCATGGGGTCAGAGCGGCGGCAGCGCACTTGGTGTGGTGGTGGAGGCCAAGAACATCACGCTCCCTGCAGGGTCTAAGGCCGTTCTGCCCTGCCACAGCCCCCGCATGGTGTGGACCCAGGACAGACTGAAGGACCGTCAGAGGGTGGTGCACTGGGACTTGGTGCGCAGCAGCCCAGAGTACTCTGTGGAGCGAGTCCTGGACATGTCCCCCGGAGCCCGTCAGAGGGTCTACAATGGCTTCAACAAGGGACGCATTTCCATCCCAGGCTCTGCTTTCAATGATGGCAACTTCTCTCTCATCATCAACAATGTGGTCTCGACTGACAAAGGAGTTTATACTTGTAATCTGCACCATCACTACTGCCAGATTCACCAGTCCATTCAGATCCAACTCAATGTCACTAAGTCAGTTCGAAAGGAGAAACGTTACTGGGATGGAGAGAAGACTGTGTTTGTTGTCTTGTTGGGCAAGTCAGTGGTATTGCCTTGTGTGAACCGGCGCTCCCTGTGGAGAGAGGGCCTGCAGGAGGACCAGCAGCAGGTGGCTCACTGGGACTTCCAGCCCCCTGGAGTGCGTCCTGATAGGGCTGACCGTCTGGTGGACCTCTATGCTTCCGGAGAGCGCCGGGATTATGGACCACGCTTTGGACAGAGCAAGATGAGCGTGGAGGAGGATGCTTTCACTTTAGGGGACTTCTCACTCTCCATTGCTGGATTGATGCCTGATGATAAAGGCCTGTACTCCTGCCACCTGCATCACCACTACTGTGGTCTGTATGAGAGACGCATCTTCAGGCTCACTGTGGGACCTCCACTTCCATCCGCCCCCACTACAGCACCCAGAATTTTCAAGAATGATTTGCCAGAGCCAAGGACTGAAGTGGTGGAGGGTCCACGCGTGGTGAATGTCATCCTCCCTGAGCAGCGAGGTTATTTCGTGCAGCATTTGGGCTACTTCCTGGCAACATTCTTACTGCTGGCGTTCATCGTTGTCGTTGTCATTGTGCTTACTCGGCGACGCAAGAATAGaggTCTGGAGTATGACCTGCGTCGATCCGATCGTGGGAATGTGATCAGTGGAGGTGAAATGTCATTAGACTGCACAGAGCTGAGGCCCTGTAACCAAGACCCTCTGAATTCAGACTACAAAAACAACCtactgaaagagagagatatgACCAAAGACTGCAATAGGGACTTTGATGGGAAGCTGTGGAAGTGAGAGCGATATTTCTGCTTCTGATGCTGCTGGCAGGTCCAGGGCAAACACCGGAAGGGTAAAGGAGCGTGgagagaagggaaaaaaaggggaaacccaggagaggacaggaggaaTGCTCCCTCTGCTGTAACTCTAACACACTAAGCTTTTTTACTAAAAGCCACCATCATTTTTTTACATGTCACTTTTTATATAACTTGCATTTTCACCAGCTGTTATGGTTAAACATATATATTTGATCCTTACTCTTTGCATTCATTAGTTGGTTTATGTTGAATActaggcatttttttttattatcctttaaaagaaaaagaaattacaaaaatgCATGTTCATTTAAGTATGTTTTATGTGTACTTTGCATGCATACAGAACTGCAAGCTCACAGCTTAAAGCTTTTCCATTCCTGAGatttaataattttctttttttgcacaaATTTGCTatactgtaatttgtaaaggtATTTCATCATGTTTCAAAGGTAAAGTTACTGTAGGTAGACAGTTTCAGACAGTGTTTGGAAAAAAAGTGCCACACATAGCTATATATAATAAGACATTTTAAACAGATTATGTCACTTTCTTTGTTTCCTttcttttgtattattttaattttatttacaaaactCGACTGTGGTGACAGTAGATTTTATGTAATTTAGAAATTCAGACTGTCAGACTTAAATTCTTCTccaaataatattttttccccaaatggATATATTTGTTCATTGATAACTTATCAAGTGAAAAATGGTGACATTGTAGGACCATGGACTAAAGGCTCAGTCTACTGAAactcaggtaaaaaaaaaaaaaatcttaaccaTTTATTTGGTTTTTAATGGGCTGTGCAGGACTTGTTTGCATCAAGCATGTATAAATGATCCTGGTTTGTAAAACACTGAATTTTCCTTATTAATCTGCTGGTCAATGCTACAGGTACAAATCTATTATAAAACATGCGGCTCTATGAGGTTTGCTGCAGGAAGACAAGTGTCTACTATCTCAGTAATTCTAAATCACAAACTGTAATCATTCATTTAACACATTTTCCTCTTTGGGGAGCACAGGTCATTCATGAACCTTCTCCAGCTGGTTGGGTGTTGGCGGTCTTCTCTGCTTCCTTCCAGGATGATTTTGTTTCCTTGAGTACTGCCTCCACAGACCTTTTCCAGAAAACTGTAATCctaacctctttttttttcttttctgctctTGCGCACTTGCTCACACTCTGTTGGTCTCTTCTAAGAAAAGATGACTTCTATTAAAGATTCACAGCAGTG

Function

symbol description
mxra8 Predicted to be involved in establishment of glial blood-brain barrier. Located in extracellular exosome.

NR:

description
PREDICTED: matrix-remodeling-associated protein 8

GO: NA

KEGG:

id description
K24402 MXRA8; matrix remodeling-associated protein 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800616.1 True 2707 mRNA 0.45 10 12848812 12859392

Neighbor

gene id symbol gene type direction distance location
aurkaip1 aurkaip1,LOC102776880 coding upstream 837 12845618 ~ 12847975 (+)
nt5dc2 nt5dc2,LOC102799881 coding upstream 69571 12768809 ~ 12779241 (+)
zgc:162200 LOC103354841 coding upstream 82772 12744560 ~ 12766040 (+)
LOC120559796 LOC104924663,LOC103354782 coding upstream 126216 12708643 ~ 12722596 (+)
tspy LOC103354774 coding upstream 144723 12697896 ~ 12704089 (+)
tnfrsf9a NA coding downstream 33079 12892471 ~ 12896719 (+)
LOC120558505 LOC103354934,LOC104924675 coding downstream 52384 12911776 ~ 12920803 (+)
dnajc11a dnajc11,LOC104924676,LOC100696684,LOC102780517 coding downstream 363601 13222993 ~ 13235009 (+)
LOC120558583 NA coding downstream 378078 13237470 ~ 13243293 (+)
LOC120558998 LOC104924681,LOC104961357 coding downstream 396455 13255847 ~ 13259321 (+)
G49330 NA non-coding upstream 8247 12828581 ~ 12840565 (+)
G49314 NA non-coding upstream 65024 12780615 ~ 12783788 (+)
LOC120559802 NA non-coding upstream 116395 12726600 ~ 12732417 (+)
G49301 gpr173,LOC107086794,LOC102204197,LOC101466594,LOC108231911 non-coding upstream 171134 12674342 ~ 12677678 (+)
G49241 LOC101072313 non-coding upstream 187441 12660427 ~ 12661371 (+)
G49334 NA non-coding downstream 61613 12921005 ~ 12928180 (+)
G49346 NA non-coding downstream 68864 12928256 ~ 12928471 (+)
G49461 NA non-coding downstream 447448 13306840 ~ 13307572 (+)
G49474 NA non-coding downstream 506339 13365731 ~ 13378409 (+)
G49502 NA non-coding downstream 573207 13432599 ~ 13433217 (+)
LOC120559236 LOC103354867 other upstream 4378 12794943 ~ 12844434 (+)
LOC120558314 porcn other upstream 190504 12652384 ~ 12658308 (+)
G49209 NA other upstream 390373 12452535 ~ 12458439 (+)
si:dkey-70p6.1 LOC100692404,LOC101477341 other upstream 545409 12283427 ~ 12303403 (+)
LOC120559657 LOC102305201 other upstream 594752 12245645 ~ 12254060 (+)
LOC120559134 dvl1 other downstream 1329 12860721 ~ 12886224 (+)
G49538 lmod3 other downstream 672998 13532390 ~ 13534922 (+)
LOC120558697 LOC103355228,LOC101470284,LOC102288766,LOC101062828,LOC100700879,LOC102197182,LOC102790759 other downstream 799340 13658732 ~ 13724990 (+)
hmga1a hmga1,LOC103355299 other downstream 1253623 14113015 ~ 14121022 (+)
uhrf1bp1 uhrf1bp1 other downstream 1346205 14205597 ~ 14227888 (+)

Expression


Co-expression Network