LOC120559190 (LOC103365742)


Basic Information

Item Value
gene id LOC120559190
gene name LOC103365742
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 10530663 ~ 10540352 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800729.1
TGGACTACAACATTTCGCGCACCTGCGCAGTGGGGAACCCGAGTCCTTTTAAATGTACTGTACGTCCAAAGATGGCAGCTCAAGTCGACTTGCTCCGTGCCAAAGTAGAAGAAGGAAATGTGAGGATTGACAGTCTGGATAGATTCAttagagagaagaaaaagaagaagagaagggaCCTGTCGCCGCCCGCTGACAAACGGGACAAGTGGGTGAAAGAAGCGAAGAGAGTGAAGCTCCCTCAGCACCCGAACCAGCAACACGCTGAGCCCCGGACCCAGCAGCCGCATCAGCTGCAGCAAAACCCGAAAGCCCACAAGTTCAGCGCAGATAAACATGTCCTGCACAgccgccaccaccaccaccaccagcaccacCACAACCGCAGTCTTACCAATGGTACAAAGAACCTGCAGCCGActttgcctcctcctcctcctccgagGAAGGTACCGGAGCAGCTGCAGAAGAAGCGAGCGGTGCTCCCCGAACCACCTGCGCTCTTCACTTTCACGCCTCTCAAAATGGTCAAGGCCAAGCCCCAGGAACTCAAAGACAAGCCCCGGGATAAAGACCTGAAACTGAAGCTGAAGAAGGAAAACACCGAGGCGAATGTGAAACACGCAGAACTGAAGAAAAGCAAGGAGCCGAGGCCCCACAATGAGAATGGCAAGTCTCTAACACTGGAGGAATATCtcctgaagaagaaaaagaagaagaagaagcaccGTGAGGATGAGCACAGTGGCAAGAAGGTCCGATACGTGCACAACAAAGCCGTTCAGACTGTGTGTGCAGGGCTCGGAGCAGATCTCAATCTGCCCGTTTGCCCCGATCCAGCTCTGCCCGGCACCGTGAAGCATGAAAGCGACTGCCAGCCTGGCAGAGACACTAACGACAACCACCAACCCTACCTCCGCGCTCTCAAACTGGGACACGTCCCCTTCCTGTCCCACCAAGACCACTACATCCGCAGCTCCTGCCTCCAGACAGGCACCTGGTGCGGACGCTTCATGCACGAGGAAAGGCAAGCCAATGGCGGGGGATCCGTTCTGCATGCCTACGCTGACGAGATAGCTTGTCTCAGCCCGGCTGAGGTGGAGTGCTTCGCCCAGGAGTTTCTGGAGCTGGCCTTTGCGGAGAAGCCTCGAGGTGCAGCCTCGTATGCCTTGGCAGTGGTGCACAGGGCAGCCGCCTTCCTGCCCGACTTCCTGGACTACTTTGCCTTCAACTTCCCAAACACACCAGTCAAAATGGAGATACTGGGCAAGAAAGACATTGAGACTACCACCATTGCCAACTTTCACTCTCAGGTGAGCCGGACTTACTGTTCAGGAACCTACCGGTCCGGACCCATGAGGCAGATCAGCTTGGTAGGAGCTGTGGATGAGGAAGTTGGAGACTTTTTCCCAGAGTTCCTCGACATGCTGGAGGAGTCACCCTTTCTCAAGatGACCCTACCATGGGGAAGCCTCTCCAGTCTGAAGCTGGACTGTCGCTCTCAGAGTGACGATGGGCCCATCATGTGGGTGCGACCAGGGGAACAAATGGTACCCACCGCTGACATGCCCAAGTCTCCATTCAAAAGACGCAGGTCCATGAATGAGATCAAAAACCTCCACTACCTGCCGAGGGCCAGTGAACCCAGAGAGGTTCTGTTTGAGGACCGGACTAAGGCCCATGCTGACCATGTAGGCCAGAGCTTTGACTGGCAGAGCACCGCTGCTGTGGGGGTTCTGAAGGCGGTGCACTTTGGAGAATGGAATAACCGACCTCGGATAACCAAAGACGTGGTGTGTTTCCAGGCGGGGGACTTCAACGAAGTTGTCCAGAGGCTGCAGCTGGATCTGTATGAGCCCCCAGTGTCTCAGTGTGTCCAGTGGGTGGACGATGCCAAGCTCAACCAGCTGAGGAGAGAAGGCATCCGCTACGTCCGCGTCCAGCTGTGTGACGACGACATTTACTTCATCCCTCGCAACGTCATCCACCAGTTCAAGACGGTGTCCGCGGTCTGCAGCCTGGCCTGGCACATCCGCCTCAAACAGTACCATCCAGACCAGGACCGGGAGGAGGAGCCGCGGCCCAGTGATCTCAGCCCCACCTCAGGGCgattctccttctcctcccctgCCAGGCTCGACGCCACCGTGACCCCCTGTGCCCGGCCACAAGGAGACAACACCCGAGGGGGCGTGGCCAAGACGGAAGAGCCAGAGTTCCAGAGGCCAGCGACGCCTCCCCAGGAGCCTCAGCCGGCCCCTCCACAGCCCACCAAATCTGCTCACTTGCCCCCAAAACACCAGAACCCCCCCCTTTCCTTTGAACTAGTCCACTCTGGATGTACACCTTCAAAAGAGCCCACCCTTCCAAAAGATTTTGGCCGCACAGCAGGGTTCCCGAAATGACCCCCCCAatatctctctccatctctgcccACTGCAGAGGAGCGTATGGGAAGGACTCGTCGACTAAAACTGACATCTGAGTCAATCACGAAGCCTTCACATTATTCATTGCACTTCTTATTTTTTATCTCTAAATGTTGATAAAATGTTCCCGTATGTTTTTTCAGCCAAAGGTACTTAATGGGACTATGTAAcacattttgttcttttttgatAGCACCTGAACTCTCTACTGTCTCATTCAAAAGGTGTGTATCATGTCAAGAATTTTAGACTGATAATATGAGTTGCCACactaaagcttgatttatgcttctgcgttgaATCTACGCTGTAGGTACGGTGCGTAGGTACGGTGCGTAGGTACGGTGCGTAGGTCACGTGTAGGTACGGACCCTACGCCCTACACGTCGGACACGACGCAGACCACAACAACTGCGATTGGTccactcggccgtggcttggtagtgttgcatttcccccgactcatttccggactctccttctccataaacaacgtgaaatcaagaagagggttaacttttcctg

Function

NR:

description
PREDICTED: round spermatid basic protein 1-like

GO:

id name namespace
GO:0005634 nucleus cellular_component

KEGG:

id description
K22610 RSBN1, KDM9; lysine-specific demethylase 9

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800729.1 True 2954 mRNA 0.55 7 10530663 10540352

Neighbor

gene id symbol gene type direction distance location
magi3a magi3 coding upstream 4329 10326748 ~ 10526334 (+)
tmem269 LOC103365731,LOC102791044,LOC104928629,LOC100689985,LOC100710458,LOC108237576,LOC101473555 coding upstream 214027 10303395 ~ 10316636 (+)
hspg2 hspg2 coding upstream 242523 10163002 ~ 10288140 (+)
pink1 pink1 coding upstream 399409 10118685 ~ 10131254 (+)
LOC120558778 NA coding upstream 413828 10023340 ~ 10116835 (+)
LOC120559192 NA coding downstream 34249 10574601 ~ 10583529 (+)
LOC120558406 NA coding downstream 53432 10593784 ~ 10747553 (+)
LOC120558407 NA coding downstream 218045 10758397 ~ 10811552 (+)
LOC120558497 NA coding downstream 777078 11317430 ~ 11328619 (+)
rapgef3 LOC103365870 coding downstream 812262 11352614 ~ 11382149 (+)
G48594 NA non-coding upstream 125904 10404052 ~ 10404759 (+)
G48507 NA non-coding upstream 516280 10010836 ~ 10014383 (+)
G48481 NA non-coding upstream 609855 9920048 ~ 9920808 (+)
G48415 LOC103359731 non-coding upstream 726317 9803739 ~ 9804346 (+)
G48400 NA non-coding upstream 764268 9764056 ~ 9766395 (+)
LOC120559193 NA non-coding downstream 3657 10544009 ~ 10560240 (+)
G48639 NA non-coding downstream 45807 10586159 ~ 10586543 (+)
LOC120558408 NA non-coding downstream 96124 10636476 ~ 10637645 (+)
G48648 NA non-coding downstream 171360 10711712 ~ 10774796 (+)
G48670 NA non-coding downstream 315150 10855502 ~ 10899132 (+)
agmat agmat,LOC102790280 other upstream 379412 10139598 ~ 10151251 (+)
ubxn10 NA other upstream 605582 9922600 ~ 9925081 (+)
G48347 NA other upstream 1100716 9404224 ~ 9429947 (+)
LOC120559255 tshz2 other upstream 1408751 8990487 ~ 9121912 (+)
G48162 NA other upstream 1804111 8716767 ~ 8726552 (+)
G48640 NA other downstream 73679 10614031 ~ 10750428 (+)
G48752 NA other downstream 632243 11172595 ~ 11173654 (+)
G48765 NA other downstream 774310 11314662 ~ 11315992 (+)
xkr5l xkr7,LOC103354446,LOC100690518 other downstream 1544100 12084452 ~ 12090773 (+)
LOC120559364 cables2,LOC103354454,LOC100695798 other downstream 1552427 12092779 ~ 12103899 (+)

Expression


Co-expression Network