LOC120559192


Basic Information

Item Value
gene id LOC120559192
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 10574601 ~ 10583529 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800732.1
TTCAGGGAATTGCACGCAAAAGCATTTCTGTAACCCACAATGCACCTACAGGAAGCAACGATCACCACAGTCCATCTCTACAGCTTCCTGAGTGTTGATTATAGTTGTTACCATTTCATGTCCACGacttcaaacatcaaaatgagGACACTGTGTCTGATTATGCTTTTTCATGCAAGCCTTCAGCTCGAGTGTGATAGAAGAGACATCAAAGCACATATCGGAGGCCAATTCACTCTTATCTGCAAGTATGACACAAGCCGGTTCCGGTACAGTAAAAAGTACTGGTGCCGAGGGGATTCTAGAAGCACCTGTGAGATTTTGGTAGATTCAGAAAGTAAAactaaaaatacacacaggGCTTACATAGTAGATGCAGGAAGAAGAGGTCTGATTGTGAAAGTCACAGATCTCCAACTTGACAACGCTGGAGTATACTGGGTTGGGATTGACAAAGTGCATGCTGACATCATGTCTTCAGTTAATGTGGTCATCACTGAAGTTCCAGTATCTGAGCCCAGTCTCCAGCCCTTGGGCTCTCTTGTGGACAGGCAGACATGTTGGGGTCAGCCAGTGACCGTGCGCTGTGGTTGTACAAAGGGCACTGCCGTTCGTTACGCCTGGTACACACACCACCAGGATTTTCTGCTTCACCACTCGTCAGATTTATACCTACACTGTGGCACAGTGGAAACGGACAGCGACTATTACTGCATTGCCAGTAATGACATAAGCAGTCACCGGAGTGTTATCCTCTCTGTGCAGGTTCTGCTGCCTGCATACAACAGCTGTATCTACGTCGTTCATATACAGGGCCAACCCATTTATGACTGTGCCGACAGAATGAGCACCAGCACGGTCAAAACTCCACCTGTGACTACGTGCCAAGCTACCATGAAAATCCAATCGGACACAAGAAACAGTTCTTTACTCATCAATCAAACTGATCAAGATATGTTTTTCAACAGggAATGGACAGGAGTGCCTTTGTGGTATACATTGCTGCGTTGGGGTTCTTTTGCTTCCTTACTGATATTTCTGTGCGTAGTACTCAAATGTACAAAAGCAAGACACAAACGTGccaagaagaagaggagagttCATGTGAGGCGAACGCCCCGGAAATCAACTTGTCCATGACTCTATTGAGagacttccagctgacagcggTATCACTGGCGGCCAGCagggagcatggatgtattaagagaacataacaacataacaaCACTGAAAAGGATGGAGAGGACACGAGAGAAGTTGTCATCGGGATACTGACGAGAGTTGTTCCAATGTCAGTGGAGCGGCTGCATGACACCGTTGACACCGTTCACCGGCTGGGAAGGAAAGGCGACGCCGCTACCTCAAATAACACACCGAGAGCAATCATCATTCAATTCGGGATGAGAATGGTGCGGGATGATGTTTGGAAAAGTCGAAGGATGCGAGAGTGTGTAGGCTAAAGACATGCACATACGTTTCAAAGAAGACTTCTCCAAAGAAGACCGGGAGGCGCGTGCGAAGCTGTGGCCACTGGTCCAAGAAGCCAGAAAGACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800732.1 True 1558 mRNA 0.47 6 10574601 10583529

Neighbor

gene id symbol gene type direction distance location
LOC120559190 LOC103365742 coding upstream 34249 10530663 ~ 10540352 (+)
magi3a magi3 coding upstream 48267 10326748 ~ 10526334 (+)
tmem269 LOC103365731,LOC102791044,LOC104928629,LOC100689985,LOC100710458,LOC108237576,LOC101473555 coding upstream 257965 10303395 ~ 10316636 (+)
hspg2 hspg2 coding upstream 286461 10163002 ~ 10288140 (+)
pink1 pink1 coding upstream 443347 10118685 ~ 10131254 (+)
LOC120558406 NA coding downstream 10255 10593784 ~ 10747553 (+)
LOC120558407 NA coding downstream 174868 10758397 ~ 10811552 (+)
LOC120558497 NA coding downstream 733901 11317430 ~ 11328619 (+)
rapgef3 LOC103365870 coding downstream 769085 11352614 ~ 11382149 (+)
dazap2 dazap2 coding downstream 915343 11498872 ~ 11503554 (+)
LOC120559193 NA non-coding upstream 14361 10544009 ~ 10560240 (+)
G48602 NA non-coding upstream 31675 10511822 ~ 10542926 (+)
G48594 NA non-coding upstream 169842 10404052 ~ 10404759 (+)
G48507 NA non-coding upstream 560218 10010836 ~ 10014383 (+)
G48481 NA non-coding upstream 653793 9920048 ~ 9920808 (+)
G48639 NA non-coding downstream 2630 10586159 ~ 10586543 (+)
LOC120558408 NA non-coding downstream 52947 10636476 ~ 10637645 (+)
G48648 NA non-coding downstream 128183 10711712 ~ 10774796 (+)
G48670 NA non-coding downstream 271973 10855502 ~ 10899132 (+)
G48671 LOC103365835,LOC104948831,LOC100710642 non-coding downstream 284329 10867858 ~ 10871077 (+)
agmat agmat,LOC102790280 other upstream 423350 10139598 ~ 10151251 (+)
ubxn10 NA other upstream 649520 9922600 ~ 9925081 (+)
G48347 NA other upstream 1144654 9404224 ~ 9429947 (+)
LOC120559255 tshz2 other upstream 1452689 8990487 ~ 9121912 (+)
G48162 NA other upstream 1848049 8716767 ~ 8726552 (+)
G48640 NA other downstream 30502 10614031 ~ 10750428 (+)
G48752 NA other downstream 589066 11172595 ~ 11173654 (+)
G48765 NA other downstream 731133 11314662 ~ 11315992 (+)
xkr5l xkr7,LOC103354446,LOC100690518 other downstream 1500923 12084452 ~ 12090773 (+)
LOC120559364 cables2,LOC103354454,LOC100695798 other downstream 1509250 12092779 ~ 12103899 (+)

Expression


Co-expression Network