cables2b (LOC101464377,LOC102312634,LOC102204736,LOC100701228)


Basic Information

Item Value
gene id cables2b
gene name LOC101464377,LOC102312634,LOC102204736,LOC100701228
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 6729702 ~ 6774102 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800794.1
ATGGCGGCGGCTGCTGCCTGCGGCCAGCACAGCGCTGCGATAACGGCCGCCGTTAGCGGCAAAAAGACGCATAGTAACCGGGAACACAGTCGGAGGAACCGGGAGAACTCTCGCCGGAGACAAGCCGCTCTTTTGTTTCTTAGTAACATCTCCCTGGACGGACGACCAGTCCAGAGTAGTTCAGCCGTGCATGTAGGAAGTCGCCACCACAAAGAGACCGACTTGGAGGGAGCCGACCCCGGCAATGCCAGCTACGGGACATTCTCCGGTCTAGCAGCGGCCGCGAACTCCGGGAATGTCAACCCCTCCCCAGCACCGAGGACAGGACTCCTCAACATACCGCCTATCCTCGTCCTGCCGTCGGACACAGAGTTCAACGATGTGGGGAGCGCGGAGGTGCTGCTCGAGTGCTGCAGAGGCTCGTTCCCTTCGCCGGGGCACAGTAACCTGCTCTCGTCGTCCCCATCCAACACCAGCCTGCTACCGTCGCCGCTGGGACCGCGGAAGTCTTCCACACTGCTGTCAGTTCACAGCTGCAACTCCGTGTCCTCCTCGGAGCCGCGACAAAGgacTCGTAACCTCTCCGGCTCTCCCAGACCTCGACACACCAAGAAGATCCACTTCATCAAAAACATGAAACAGTACGACACGAGAGGCAGCAGGATCGTGCTGATCTGTGCAAAGAGATCTCTGTGTGCTGCCTTCTCTGTTCTGCCCTACGGAGAAAGCTTCTACCTTAGtGACCCTACATTAAACCACCCGAGGAGGAGGCATTCGTCTGGTAACATCTCCACCACCCTGGAGATGCTGCCGGGGCTGGAGGGCTTCCAACTGGACACCTACGGCaggtcGGTGTCGTACGCCCAGTTCCTGTACCCCACTAACGCCCTGGTGAGACACAAGCCATCGTCGACCAGCGACCTGACGCTGCAGATCCCCGTGTCCAGGAGCGCTCACAGCATGGCGGGCAGGAGCCGCCCACCCAGCAGACTGAACAGCACCGTGGGACTGGACCTgggtctggACGATGTGACAGACTACGATCCTAACCTCCTCAGTGACCCCCAGTGGCCTTGTGGGAAACACAAGCGGGTGCTGATCTTCGCCTCCTACATGACGACAGTAATAGAATACGTCAAGCCGTCTGATCTGAAGAAAGACATGAACGAAACGTTTAAGGAGAAGTATCCCCACATTAAACTCACCCTCAGCAAGATACGCAGTCtgaagagagagatgagagtaGTTGGGGAGGATTGCGGCATGCAGCCCGTCACCATCGCCATGGCGTTTGTCTACTTTGAGAAGTTGGTGCTGCAGGGTCGACTGAACAAACAGAACAGGAAGTTGGTGTCAGCTGCCTGCATCCTACTGGCTGCTAAGATCAGCAGTGACCTGAAGAAACAGGAAGTCAAACACTTCATTGATAAGCTGGAGGAGCGTTTCAGGATCAGCAGGAGGGAGCTAATATCGTTTGAGTTCACCATCCTGGTCGCCCTGGAGATGGCGCTCTACCTCCCCGAGAGCAAAGTCATGCCACATTACAGGAAGctggtgcagcagcagcagtcctaGCACCGACatctcctcccccccctcccctcccctcctcctccctgcagACTCTCAGCACCTTTCAGCATCACACTGTAGCGGTTGGACGGGTCCTCTGGGTGCCTGGCTCAGAGGCACTGATGCACCACTCTCTGCTCACAGCGCAGACACGTAGCCCATCCACACTGTGACGGTAGTGCCTGGCTCGACGGCACGGCAGCGCAGAGAGCAATGTCGGCTCTCCGCTCACCCCAAACGCCAAAGTGACAACACACTGTGACGCCTGGTGCCTGGCTCAGCGGCACCACGGGAATCACTGAAGGCCATATCTATCGCCACACTTATGTAAAGTTTCCCTCACTGGCTCGTTTGCCGAGATTTT

Function

NR:

description
CDK5 and ABL1 enzyme substrate 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800794.1 True 1936 mRNA 0.58 10 6729702 6774102

Neighbor

gene id symbol gene type direction distance location
xkr7 xkr7,LOC103148205 coding upstream 45791 6579186 ~ 6683911 (+)
sox18 LOC104941087,LOC103385144,LOC107094976,LOC100711530,LOC101485236 coding upstream 227522 6493569 ~ 6502180 (+)
rgs19 LOC103373111 coding upstream 336200 6346108 ~ 6393502 (+)
LOC120559680 fam187b,LOC104965325,LOC102795245 coding upstream 457022 6262023 ~ 6272680 (+)
oprl1 oprl1 coding upstream 494859 6063850 ~ 6234843 (+)
LOC120558797 NA coding downstream 81075 6855177 ~ 6863948 (+)
LOC120558795 NA coding downstream 95477 6869579 ~ 6934548 (+)
LOC120558791 NA coding downstream 252975 7027077 ~ 7066173 (+)
LOC120558603 NA coding downstream 352522 7126624 ~ 7135842 (+)
LOC120558799 NA coding downstream 369686 7143788 ~ 7149386 (+)
G47508 NA non-coding upstream 4504 6722739 ~ 6725198 (+)
G47504 NA non-coding upstream 8030 6646655 ~ 6721672 (+)
G47503 NA non-coding upstream 40988 6632869 ~ 6688714 (+)
G47482 NA non-coding upstream 301704 6427468 ~ 6427998 (+)
G47460 NA non-coding upstream 475128 6242925 ~ 6254574 (+)
G47516 NA non-coding downstream 59069 6833171 ~ 6915980 (+)
G47517 NA non-coding downstream 71946 6846048 ~ 7305481 (+)
LOC120558815 NA non-coding downstream 97591 6871693 ~ 6889136 (+)
G47522 NA non-coding downstream 100407 6874509 ~ 6875118 (+)
G47531 NA non-coding downstream 189590 6963692 ~ 6967671 (+)
ccm2l ccm2l,LOC102778549 other upstream 8770 6697993 ~ 6720932 (+)
G47444 NA other upstream 529108 6199046 ~ 6200594 (+)
LOC120559501 NA other upstream 1954344 4772932 ~ 4775358 (+)
gpr173 LOC104932793,LOC101475032,LOC100694027,LOC104957049 other upstream 2863904 3843064 ~ 3865798 (+)
LOC120559404 NA other upstream 3214944 3448104 ~ 3514758 (+)
G47903 LOC104965021 other downstream 1338339 8112441 ~ 8116228 (+)
pkig pkig other downstream 1568648 8342750 ~ 8380578 (+)
LOC120559763 NA other downstream 1704021 8478123 ~ 8497394 (+)
LOC120559293 pifo other downstream 1880310 8654412 ~ 8662891 (+)
G48077 NA other downstream 1906180 8680282 ~ 8687964 (+)

Expression


Co-expression Network