LOC120559247


Basic Information

Item Value
gene id LOC120559247
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 12008707 ~ 12017567 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800842.1
TGTTAAAATGCCACTAAAAGAGAGCCACACAAAAGGGAGATGTCTGTTCGCCAGAATGCAAATAAGTACTCTCAAAAACAGAATAGGTGCAGCAGTTTGGGCTGCTTTCTCTACTGGATGGTCAACCCTTCGACCCGTTGGACTGTGCAACGGAGATTCAGCTTTGCCGGGGTTGACGTCACCTCAAAAGAGGCCTCCAAGGAGCCCATCACCACTTGCATGACTCTCTTCGGTGGTCCTTGTTGCTTTCGTTACCTATCACCTTTTGCTGATGCTAACATGCCTAAAAATAGCCAAACCAAGCGGGCAAGGGACGCTGCACGCAAGAGGAGGGCAGAGGAAACGCCAGAGAAGCGAGCAGAGCGCCTGGCAAGACGTGCTGTGCGCATGGCTGAGAAGAGGGCAGAGGAAACACCGGGGGAGCGAGCAGAGCGCCTGGCAAAAAATGCTGCGCGCATGGCTAAGAAGAGGGCACGCCTAGTGCGTGACCTTCGACGACACATGGAGCAGGTTCTCCCTGACAGGCAGCAGCTCTGGGTCCGGGAGAAGAACTGCAGTCTGGACCAAGAGGACCCAGAGCCTCCACAGATTAAAGAGGAACGGGAGGAAGTCTGCATCAGTCAGGTGGCAGAGCGGCTTGTACTGAAGCAGGAGACTGATGCCTTTATGTCTCCTACTCATGAGGAAAATGACCACCAGACCACCTTTACTAATGCCCACTTGCCTAAAGAAAGCCGTGCACATGCAGCCGAATCAGATGAAGCACGAGCTGCGCGCCAGGGGAGCAACGCTGTGTGCATGGTTAGGATGAGGGCAGAAAAAACACTGGAAAAGCGAGAAGAGCTCTTGACAAAAGATGCGGTGCGCAAGTCTAAAATGAGAACAGAGGAAACGCCTGCGAAGCGAGCAGAGCGCCTGGCAAGAAATGCTGTGCGCATGGCTGAGAAGAGGGCAGAGGAAACACCGGAGGAACGAGCAGAGCGCCTGATAAAAGACGCTGTGCGCATTGCTGAGAAGAGGGCAGAGGAAACGCCGGAGGAGCGAGCAGAGCGCCTGATAAAAGACGCTGTGCGCAATGCTAAAATGAGAGCAGAAGAAACGCCGGAGAAGCGAGCAGAGCGCCTGATAAAAGACGCTGTGCGCAGTGCTAAAAGGAGAGCAGAGGAAACGCCGGAGAAGCGAGCAAAGCGTCTGGCACGAGTTGCTGCATACAGGGCTAAAAGAAGGGCCCGCCGGGCACAGGGCCTTCAACATCAGAAGGAGAAGTTTCTCCCTGACCAGCAGCAGCTCTGTATTGAGGAGAGGATCTGCAACCCCAACTTTTCAGAGCTGTTTGAAAAACCATTGCTTTGTGAGACCTGCGGCAAAACATTCAGGAACATTTCGTTATTGAAAATCCATATGGCAATCCACAAAAGCGAGAGACCATATTTGTGCAAAACATGTGGGAAAGATTTCAAAGTTGCCAGTATTTTGAAAGcccacatgagaactcacacagttAGGAAGCTGTGCGATTGTAAGACCTGCGGAAAAAGATTAAGTTGCGTTGCATCATTGAAAAGCCATATGACAATCCACACAGGTGAGAGACCATATTTGTGCCAAATATGTGGGAAAGATTTCCGACTTGCCGGTATCTTGAAATCTCACATGAGAACCCACGTAGGTAAGAAGCTGTATACTTGTGAAACATGTAGGAGAGATTTCAGTGTTAGGTGtgcttttattgtccatatgagaactcacacaggtgagaagccatACTTTTGCAAAACCTCtgatgaatgattttttttgaaTTGGAAAGGCATACAAAAAGCATACAGtgagaaacaaaacaagtaagGAGCCACATGAATGCAAGTTTTTCCTCAAATCTCATTTCTAACAAAACAATCCATAAACAGGACAAACCGTCAAGATGAAACCTCTTTGGTTGCAGCATCTTTGTAACTATAAAAAGCTTTTcccataaaaaagtcacaatatGTTATTGTAATGATGTTGTACGTTATCAACAATGCCAGCAGGTTTTGTTAAATTAACCTGTTTTTTTGTATGCATATTACTGCATTACAAATTTTTCAGTTAGTAATAGTATTTCTTTATAACAATCATTATCTCCCACATCTTTGAAAGATCTTTGTTGCACAATGGGTCCATCATTTTcaaggaaaaacaaacacattgtaGATGTTGCTGTGCTCAAATAGTTTTGGTAAAAATTCAAGTCTGATGTTCCCAACTTGATGGATTGAGAGATAGCGTTAACTACAGCCAATAAACAACCCAAGTGGTAGTAGTGCATATGATTAGTGATTAGTGCCTAAAGGAATGTTGCTGTTTTTGCTTACATTTTCAATCTTATGTATGTATTCTAACAATAAAGCTTTGTATTGTGATTATA
>XM_039800843.1
TGTTAAAATGCCACTAAAAGAGAGCCACACAAAAGGGAGATGTCTGTTCGCCAGAATGCAAATAAGTACTCTCAAAAACAGAATAGGTGCAGCAGTTTGGGCTGCTTTCTCTACTGGATGGTCAACCCTTCGACCCGTTGGACTGTGCAACGGAGATTCAGCTTTGCCGGGGTTGACGTCACCTCAAAAGAGGCCTCCAAGGAGCCCATCACCACTTGCATGACTCTCTTCGGTGGTCCTTGTTGCTTTCGTTACCTATCACCTTTTGCTGATGCTAACATGCCTAAAAATAGCCAAACCAAGCGGGCAAGGGACGCTGCACGCAAGAGGAGGGCAGAGGAAACGCCAGAGAAGCGAGCAGAGCGCCTGGCAAGACGTGCTGTGCGCATGGCTGAGAAGAGGGCAGAGGAAACACCGGGGGAGCGAGCAGAGCGCCTGGCAAAAAATGCTGCGCGCATGGCTAAGAAGAGGGCACGCCTAGTGCGTGACCTTCGACGACACATGGAGCAGGTTCTCCCTGACAGGCAGCAGCTCTGGGTCCGGGAGAAGAACTGCAGTCTGGACCAAGAGGACCCAGAGCCTCCACAGATTAAAGAGGAACGGGAGGAAGTCTGCATCAGTCAGGTGGCAGAGCGGCTTGTACTGAAGCAGGAGACTGATGCCTTTATGTCTCCTACTCATGAGGAAAATGACCACCAGACCACCTTTACTAATGCCCACTTGCCTAAAGAAAGCCGTGCACATGCAGCCGAATCAGATGAAGCACGAGCTGCGCGCCAGGGGAGCAACGCTGTGTGCATGGTTAGGATGAGGGCAGAAAAAACACTGGAAAAGCGAGAAGAGCTCTTGACAAAAGATGCGGTGCGCAAGTCTAAAATGAGAACAGAGGAAACGCCTGCGAAGCGAGCAGAGCGCCTGGCAAGAAATGCTGTGCGCATGGCTGAGAAGAGGGCAGAGGAAACACCGGAGGAACGAGCAGAGCGCCTGATAAAAGACGCTGTGCGCATTGCTGAGAAGAGGGCAGAGGAAACGCCGGAGGAGCGAGCAGAGCGCCTGATAAAAGACGCTGTGCGCAATGCTAAAATGAGAGCAGAAGAAACGCCGGAGAAGCGAGCAGAGCGCCTGATAAAAGACGCTGTGCGCAGTGCTAAAAGGAGAGCAGAGGAAACGCCGGAGAAGCGAGCAAAGCGTCTGGCACGAGTTGCTGCATACAGGGCTAAAAGAAGGGCCCGCCGGGCACAGGGCCTTCAACATCAGAAGGAGAAGTTTCTCCCTGACCAGCAGCAGCTCTGTATTGAGGAGAGGATCTGCAACCCCAACTTTTCAGAGCTGTTTGAAAAACCATTGCTTTGTGAGACCTGCGGCAAAACATTCAGGAACATTTCGTTATTGAAAATCCATATGGCAATCCACAAAAGCGAGAGACCATATTTGTGCAAAACATGTGGGAAAGATTTCAAAGTTGCCAGTATTTTGAAAGcccacatgagaactcacacagttAGGAAGCTGTGCGATTGTAAGACCTGCGGAAAAAGATTAAGTTGCGTTGCATCATTGAAAAGCCATATGACAATCCACACAGTAACAAGACAAAAAATgtactaaaacaacttttttgaGGGAGAAGCAGCTTCATGTGGGAAGTAAACCATCACCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800842.1 True 2410 mRNA 0.46 3 12008707 12015065
XM_039800843.1 False 1661 mRNA 0.51 4 12008707 12017567

Neighbor

gene id symbol gene type direction distance location
cebpb cebpb,LOC107391299 coding upstream 37348 11969539 ~ 11971359 (+)
LOC120559303 mmp19,LOC101481755,LOC102777654 coding upstream 192153 11813252 ~ 11816554 (+)
pym1 pym1,LOC102777374 coding upstream 196896 11807712 ~ 11811811 (+)
pan2 pan2 coding upstream 230872 11760824 ~ 11777835 (+)
nemp1 LOC102776021,LOC100691505,LOC106916931,LOC103139126,LOC106959146,LOC102307926,LOC102208298 coding upstream 262965 11737286 ~ 11745742 (+)
tuba5 LOC103354413,LOC100695265,LOC101484757,LOC102298344 coding downstream 97 12017664 ~ 12023947 (+)
kdm5bb LOC103354421 coding downstream 25528 12043095 ~ 12063263 (+)
rap1aa LOC106952760,LOC107389464,LOC101074250,LOC103139095,LOC100690250,LOC107090729,LOC105935262,LOC102226994 coding downstream 50846 12068413 ~ 12082842 (+)
LOC120558724 NA coding downstream 112269 12129836 ~ 12141802 (+)
LOC120559656 gid8,LOC100691864,LOC107090700,LOC102225438,LOC105935248,LOC101169608,LOC101073127,LOC108231957,LOC103139083 coding downstream 223479 12241046 ~ 12243801 (+)
G48978 NA non-coding upstream 25972 11953174 ~ 11982735 (+)
G48986 NA non-coding upstream 100835 11907779 ~ 11907872 (+)
G48980 scrt2,LOC107391295,LOC102228875,LOC108249568,LOC106536404 non-coding upstream 105228 11881963 ~ 11903479 (+)
LOC120559701 slc13a3,LOC103399527 non-coding upstream 145767 11860102 ~ 11862940 (+)
G48876 NA non-coding upstream 255470 11752998 ~ 11753237 (+)
G49086 NA non-coding downstream 124575 12142142 ~ 12142527 (+)
G49094 NA non-coding downstream 128637 12146204 ~ 12146526 (+)
G49105 NA non-coding downstream 194177 12211744 ~ 12212515 (+)
G49106 NA non-coding downstream 202446 12220013 ~ 12223054 (+)
G49157 NA non-coding downstream 346526 12364093 ~ 12364441 (+)
G48765 NA other upstream 692715 11314662 ~ 11315992 (+)
G48752 NA other upstream 835053 11172595 ~ 11173654 (+)
G48640 NA other upstream 1258279 10614031 ~ 10750428 (+)
agmat agmat,LOC102790280 other upstream 1857456 10139598 ~ 10151251 (+)
ubxn10 NA other upstream 2083626 9922600 ~ 9925081 (+)
xkr5l xkr7,LOC103354446,LOC100690518 other downstream 66885 12084452 ~ 12090773 (+)
LOC120559364 cables2,LOC103354454,LOC100695798 other downstream 75212 12092779 ~ 12103899 (+)
nol4la LOC103354513,LOC100696587 other downstream 164642 12182209 ~ 12210409 (+)
trnae-cuc_14 NA other downstream 206000 12223567 ~ 12223638 (+)
LOC120559657 LOC102305201 other downstream 228078 12245645 ~ 12254060 (+)

Expression


Co-expression Network