LOC120559291


Basic Information

Item Value
gene id LOC120559291
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 8556678 ~ 8557969 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800913.1
GAGAAGGAACTGTACTATCTGTCCAGAAGACAATGGCAAACACATCTTGTCAAGGTATCAGATTTGACTTTACAGGCAGATTCCTGCCTCCTGTTTACATCTTAGTCTTCATCATCGGTCTGCTAGCTAATGGATGGGGATTGAAGTCTTTGCTGCAGAATTGGAAGAAACTAGGCATCATTAATGTGTTTGTTCTCAACCTCGGACTTGCTGATATTCTGTACCTGCTCACACTCCCCTTTTTGGTGGTGTACTACTTTATGGAGAGCAAGTGGATCTTTGGAGACGCATTCTGCAAGATAACAAGATTCTGCTTCAACCTGAATTTATATGGCAGCATTGGGTTCCTTACATGTATAAGTGTGTACAGGTACCTGGCTATTGTCCATCCAATGAGAGTGATGGGAAGAATAACGGTCACTCACTCTGTGGGGATCTCAGTCATGGTTTGGTTCTTGGTGAGCGTTCAAAGTCTTCCAGGCATGTTCTACAGCAAAACATTTGGAAACAAGCCTGGGAAATGTTATGATACTACCCATAAGACATATGTGGATGATTACCTGAAATACAGCCTTGGATGGACATTCACTGCGTTTTGTATCCCATTGCTCATCACATTGGGCTGCTATGGACATTTGATTGTCGTTCTCTGCCGCACAAATACCACTGACAAGGTACTGAAACAGAGATGCTTGAAGTTGTTGTTCATCGTgattcttctcttctctgtttgTTACATCCCCTATCATGTACTGAAGAACCTCAACCTCTGGTCAAGAGTTCTGCAAAATCAGAAGATATGCCGTGAATGGTTTAATGGAGTCTACATTGCTCATCAGATAAGTCGGGGCCTTGTGTGTCTGAACAGTGCTCTCAACCCTCTGGTTTACCTCCATGGAAATGAAGATACTCCTGCTCAGCTCAGACGACGACTGCAGCAAGCTCGTAAAGCTTTCATGTGTCTCACCCCTAGTCAAGTTCCACTGGTCGAATTGTCTAATATGTGAATGAAATTGAATTATTGTATTGCATCATCTTGTTCTGGGTCAAGGTTTTTATCTATGTTATGGTCATATTGCTATTAACAGGCTCAAAAAGGCTCAGATTAAAAGAAGAAAtgaattcattattattataatttgaaaatgtcacGGTTCACTTTCAGAAAGGTTTGCTGAGAGAACAGGACCGTGTTTTGTGATCGGGGGCTCAGTGCTATGCATGATTTCTTTGGATTGAAACAGGAAGTTCATAGTGTGAACGTGTAAAAATAAACAGTGTAAAAATGCAAA

Function

GO: NA

KEGG:

id description
ko04062 Chemokine signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800913.1 True 1292 mRNA 0.41 1 8556678 8557969

Neighbor

gene id symbol gene type direction distance location
LOC120559765 NA coding upstream 20661 8534741 ~ 8536017 (+)
LOC120559764 NA coding upstream 35048 8520644 ~ 8521630 (+)
LOC120559918 NA coding upstream 87099 8468520 ~ 8469579 (+)
LOC120559920 NA coding upstream 89677 8465976 ~ 8467001 (+)
LOC120559919 NA coding upstream 93585 8450056 ~ 8463093 (+)
LOC120559290 NA coding downstream 69 8558038 ~ 8561083 (+)
LOC120559284 pfkfb1,LOC100700435,LOC101066702 coding downstream 4084 8562053 ~ 8605758 (+)
LOC120559288 NA coding downstream 11112 8569081 ~ 8570331 (+)
itih6 itih6 coding downstream 47894 8605863 ~ 8632825 (+)
LOC120559286 NA coding downstream 87809 8645778 ~ 8654316 (+)
G48063 NA non-coding upstream 23877 8532596 ~ 8532801 (+)
G48039 NA non-coding upstream 108364 8448107 ~ 8448314 (+)
G48018 NA non-coding upstream 174949 8381491 ~ 8381729 (+)
G48017 NA non-coding upstream 175250 8381087 ~ 8381428 (+)
G48002 NA non-coding upstream 223147 8332522 ~ 8333531 (+)
G48075 NA non-coding downstream 116504 8674473 ~ 8677331 (+)
G48079 camk1g,LOC102780232,LOC102204221,LOC101478990,LOC103361639 non-coding downstream 132734 8690703 ~ 8700088 (+)
G48158 NA non-coding downstream 156350 8714319 ~ 8714568 (+)
G48160 NA non-coding downstream 157918 8715887 ~ 8716184 (+)
G48176 NA non-coding downstream 185665 8743634 ~ 8747729 (+)
LOC120559763 NA other upstream 59284 8478123 ~ 8497394 (+)
pkig pkig other upstream 176100 8342750 ~ 8380578 (+)
G47903 LOC104965021 other upstream 440450 8112441 ~ 8116228 (+)
ccm2l ccm2l,LOC102778549 other upstream 1835746 6697993 ~ 6720932 (+)
G47444 NA other upstream 2356084 6199046 ~ 6200594 (+)
LOC120559293 pifo other downstream 96443 8654412 ~ 8662891 (+)
G48077 NA other downstream 122313 8680282 ~ 8687964 (+)
G48162 NA other downstream 158798 8716767 ~ 8726552 (+)
LOC120559255 tshz2 other downstream 432518 8990487 ~ 9121912 (+)
G48347 NA other downstream 846255 9404224 ~ 9429947 (+)

Expression


Co-expression Network