idh3g (idh3g)


Basic Information

Item Value
gene id idh3g
gene name idh3g
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 22022834 ~ 22028294 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800925.1
GCACAACGCCTCATCTTCGTTCATCACGCGACCAGCGCTTTAAGAATCAAGATGGCTGCCCACAGTGCTGTGCTCTCGATGTCCAAAATCATTAATCCTTTCTGGGGTGGACGCCTTGGCAATACGGTTAAAgtATTTGGGACAACTCTGACAAGTCACAGGAATAAGACCTTACGTAGTGGAAACAACATTCCCCCTCCTGCAAAGTATGGAGGCAGACACACTGTGACCCTCATACCTGGAGATGGAATCGGTCCAGAGCTGCTCAATCACGTCAAAGAGGTTTTCAGGTTCAGCTGTGTCCCGGTGGACTTTGAGGTGGTGCATGTCAACTCTGCTTTGGAGAGTGAGGATGATATCAACAATGCCATCACTGCCATTCGCCGTAATGGAGTTGCCCTCAAAGGTAACATAGAAACCAACCACACCATGGCGCCATCTGTCAAATCCAGAAATAATCTCCTGCGGACAAGCTTAGACCTGTATGCCAATGTGATGCACTGCCAGTCGCTCCCTGGAGTCCAGACTCGCCATAAGAACATTGACATCATGATCATCAGGGAGAACACAGAGGGAGAGTACAGCAGTCTGGAGCATGAGAGTGTATCAGGGGTAGTGGAGTGCCTCAAGATCATCACCAGGAACAATTCCCTCAGGATCGCTGATTATGCCTTCCGACTGGCCAGGGAAAAAGGTCGTAGTAGGGTCACTGCTGTACACAAGGCTAACATCATGAAGCTCGGCGATGGCTTGTTCTTGCAGTGTTGCAGAGAAGTGGCCTCTGGTTACCCAGACATCACATTTGACAGCATGATTGTGGACAACACCACCATGCAGCTGGTGTCCAAGCCACAGCAGTTTGATGTGATGGTGATGCCCAATCTGTATGGGAACGTGGTGAGCAACGTGTGTGCAGGCCTGGTGGGAGGGCCTGGCCTCGTGCCCGGGGCTAACTTTGGCCGTGACTATGCTGTCTTTGAGACGGCTACAAGGAACACAGGGAAGAGTATTGCTGGCAGGAACATTGCTAACCCTACTGCCATGCTGCTAGCCGGCTGCATGATGCTGGACCACCTTAAGCTTTACGACTACGCGAGTATGATCCGAAATGCAATCCTCACCACCATGAATGAAACCAGGttgCACACCGCTGATATCGGGGGTCAGGGCACCACGTCAGAGGTGGTCCAGTCCATCATGAGGAACATCCAGAGTAAAGGGCCTCTCACAACTGACCTCTAAACACATATTCATCAGAGGTGTGAGTTTGAACATGTTTTCCATGCATGTCAGTTTCCATGGCATCGGGTCTTATCACTGACATCGCaacggtttcttttttttcttgttgatgCAGCTTACTGATCACTGTACAAACAGCCTTTTATCCACACCGGTGTGTTTCACATATAAATGATGACCTTCATGAGACAGGTTTTAAAACGGTTTACTTTGGATCAAATTCCATTCCATCACTCCCATTAGATGATAAATCCTACTGTAAGGATATTTTCTGAGTTCATCAGGTTCATTCAGTTGGAAATAAGTGTTTTTACAAATTGTTATGAATGTCAATGAGgatcattatttattttccaaattATGACTATGTTACAGCCTTCTCACTCAGCCAAAATGTGTTATGTTCATTTAATGCCTTGCCTTTTTTGTCATACTGAAGCTACAGTGTCAAGTTGGCTGTTATATAATGTACTGGTCTGTGTGTTCTGTGATCAACTGTACTATAAAAATGGTGATGTAGTTATttcatatatactgtatcagAGGAGGTGTACATGAAGTAGTTGTCTATCATATATGTGAGTGGGTATATATACCGTATAACACAAATATTATCAATAAAGTAATAATCTAATAA

Function

symbol description
idh3g Predicted to enable NAD binding activity; isocitrate dehydrogenase (NAD+) activity; and magnesium ion binding activity. Predicted to be involved in isocitrate metabolic process and tricarboxylic acid cycle. Predicted to be active in mitochondrion. Orthologous to human IDH3G (isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma).

NR:

description
PREDICTED: isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial isoform X1

GO: NA

KEGG:

id description
K00030 IDH3; isocitrate dehydrogenase (NAD+)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800925.1 True 1879 mRNA 0.46 13 22022834 22028294

Neighbor

gene id symbol gene type direction distance location
ribc1 NA coding upstream 194944 21823518 ~ 21827890 (+)
tmem9 tmem9,LOC107707676,LOC106572715,LOC107669678 coding upstream 241884 21776471 ~ 21780950 (+)
zgc:153867 LOC107390870,LOC103467339,LOC102296328,LOC104956861,LOC105928965,LOC106950810,LOC106525009,LOC101167617,LOC102221965,LOC100708807,LOC101480989 coding upstream 276117 21737480 ~ 21746717 (+)
c1galt1a LOC104956867 coding upstream 402633 21607339 ~ 21620201 (+)
LOC120559688 NA coding upstream 467639 21553252 ~ 21555195 (+)
zgc:158263 LOC104932850,LOC104967525,LOC101474144,LOC102796628 coding downstream 82693 22110987 ~ 22119609 (+)
cacnb3b LOC103363728,LOC104967530,LOC100705687,LOC101472360 coding downstream 156002 22184296 ~ 22199110 (+)
rnd1b LOC101472065,LOC103358261,LOC100705424,LOC104932892,LOC103384592 coding downstream 174797 22203091 ~ 22213864 (+)
ptges3a LOC107390842,LOC103368333,LOC104967534,LOC100704884,LOC106525288,LOC108244561,LOC101471106 coding downstream 212188 22240482 ~ 22244763 (+)
mipa LOC103368323,LOC101065051,LOC100704616 coding downstream 218661 22246955 ~ 22248730 (+)
G51935 NA non-coding upstream 107997 21914325 ~ 21914837 (+)
G51927 NA non-coding upstream 116586 21905055 ~ 21906248 (+)
G51922 huwe1 non-coding upstream 121831 21900444 ~ 21901003 (+)
G51921 huwe1 non-coding upstream 122603 21899124 ~ 21900231 (+)
LOC120559724 NA non-coding upstream 126378 21895341 ~ 21896456 (+)
G52006 NA non-coding downstream 2915 22031209 ~ 22031519 (+)
LOC120558642 NA non-coding downstream 56972 22085266 ~ 22086233 (+)
G52031 naa10 non-coding downstream 77351 22105645 ~ 22106945 (+)
G52035 NA non-coding downstream 83175 22111469 ~ 22137332 (+)
LOC120558498 NA non-coding downstream 144850 22173144 ~ 22176411 (+)
G51926 NA other upstream 118757 21903542 ~ 21904077 (+)
LOC120559721 cacna1s,LOC103368470 other upstream 214920 21783217 ~ 21807914 (+)
birc5b LOC107086758,LOC102206178,LOC102295711,LOC100709346,LOC106950807,LOC103141143,LOC106920826 other upstream 302711 21717109 ~ 21720123 (+)
G51804 NA other upstream 463485 21558890 ~ 21559349 (+)
G51734 acvr1b,LOC100709886,LOC101485924 other upstream 658404 21361290 ~ 21364430 (+)
avpr2aa avpr2,LOC105897269 other downstream 18469 22046763 ~ 22060645 (+)
LOC120558641 LOC103363734,LOC104967523 other downstream 61903 22090197 ~ 22094890 (+)
G52210 LOC104964406,LOC106525460,LOC105931770 other downstream 528035 22556329 ~ 22560328 (+)
LOC120559933 NA other downstream 533860 22562154 ~ 22562521 (+)
lamtor5 lamtor5,LOC102787529 other downstream 813750 22842044 ~ 22846938 (+)

Expression


Co-expression Network