LOC120559318


Basic Information

Item Value
gene id LOC120559318
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 19241532 ~ 19327554 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800957.1
GCGGACCCGATGGCAGGACAGGTCATGAGAGAGCTGAGCCGATGAGATCATGGAGCCTGCGCCGAGGTCGGACAGGGTACGGTTAGGACTTCACGGTGATGGAGAGGTACCTGTCCGAATCCATGATGTCCTGCACTGTAGCTGAAACCACAATACCTCTGGCCTTTGTGTCTGGGAGCCCTGTAGCCAACAGTCACTGCCATCTTCTTCTAATAGAACTAAATAAGACTCAGCCTAAAGCCCTAAACAATCAGGGATGGACAGGTGAAAACTAAGAGGCCGAGATGTGGCCTTTATTCTAAACCTTGTCTTTTATTCTGGTTCCGTAAAGGGACATAGAAATATCCCCAACCTTAACAGTTTCATCTCAGAAGTCCACTTTTGCCATATAAAAATAATGCCTTTAAACATTAGAGCCAAGCCTGCTCAGAGCAAGCTGTCTGCTGCCCCAAAGAGTAGTGGGCACACTGATGGCAGCACATCTCATGCACGCTTTTCCAGATCCCCCAAACAGGGCAAAGGCAAACAGGCTGTAAGCTCAGCACCAGGCTCCCGCTCGGGGCTAGAACCAGGCTCTGTGTCAGGGGGTGTGCCTGCCCCAGCATCTAAATTGGCAGGAGGTCAAGGCTCTGTGTCGAAGCCAGCTTCAAAGATCAAACCTTCCACAGCAGCAGACAAAGGAGCAAGTCGTGGTTCAGCGACAGCTCCAGGGGGTAAAACCCTGTCTATGGAGAACATCCAGTCTTTGAGTGCTGCCTATGCCACATCAGGCACCATGTACCCCTGTGAGCGAGATTCCTTGGAACCCTCTGGTGGGTACCCGAAAGGCACCATGACGCTGGGCAGGAGTACCAGCCGCTCCTCCTACACTAACCGAACACCTGCCATGGGCAGTACCCCAAACATCACCTCCTCTGGGTTACATCAACAGTCAGACCCCTATGGAGACCAAACCTTGCATCCTGCAAGGACTTCCAGTCTGCGGCACCAGTCTGGGAGACATCCACAGGCATTGGATTCGGCTGGACGGGGAGAGGTTTCCTCGTTTGATCTACAGTCTCAGCTGAGGGAGCTGCAGAGGGAAAATGACAACCTGAGGAGAGAACTGGATGTAGGGAGGGATGGAAGGACGGGCCCCAGCATGAACAATGTCAACTTCTGGACCCCAGATGTGAAAAGAGACAAGGGGGTTCGGCGGGAGGAGGGAGTGAGGACCTCGGTTCTGAAGGACCAGTACAGGACAAACCAAGAGGATTTGCAACCTGGGGATATCAGAAGAAACAAGCAGCTTCCGTTGACAGTTCAGGAGCTACAGGAGGAGCTGAGGGCTCACAGAGAGATGAACAGCCGCTTGCAGCAACAACGACAGCAGGGGAACTCTGGCTCCCATCGAGAAATCCATACAGACCAGGACCACAGAGGGGGGCTCAGCCCTGGCCACAGCCCCAGACAAAGCTCCAGCAACCTGCATAGTCCTGGTCCAAAGAATAGCCCGAGAGCCAGCCCATCCAACACCTACAATCCGAGGCAACAGGAAGCTGATGTCATCATTCACAGCCCTGGTTATGGCTGTAACACTGCAATAGCTGTGCAGAGAATCAGCCCTGCCAACACCCTTCAGCCTGGGCGGAGGAACGGCCCAAATCAGCCCCTATACACTCCCAGCCAAGGTCCGGTGGTAGCTCCCAGCTCTGGTTCACTCCGGCCCTGCAGCCCCTGCCAGGTGCCCGGGTGTGACGGCTTCTTCTCACCTCCGCCTCTGGATCCATCAGAGGAGAATGTCTTCCGGATGCAGGCAGAGCATGAGCGGCAGGCCAAAGAGCTGTTCCTGCTGAGGAAGACCATGGAAGAGATGGAGATGAGAATCGATTCTCAGAAACAGACTCTGGGCGCCCGGGACGAGAGCATCCAGAGGCTGCTGGAGATGCTTCAGGGCCAAGGCCAAGGTCAGGGACACTGGGGTCGGGGACAGCCGACAGGCATCGTAACCATGGCAGCACAGGAGGCTGAATCGCAGCTGGAGAACATGCATGTGCGAGAGGAGCTCCATCGCCGGAACCAGCTCCAGGCCGATCCGGCCAAGACCAGGGCTCTGCAGACTGTCATTGATATGAAGAACACCAACGCCCCTTTCTGTTTTGATCCTGACGTTATCTGGCAGGACACAAAGATTTCTTCCCTGGAGAGGAACATCAGAGACTTAGAGGATGAGGTCCAGATGTTAAAGACCAGCGGCCTGCTGCACCCCGATGACAGGCACAATGAGCTCAAGCATGTGGAGGTCTACAAGAGCCATTCTAAATTCATGAAAACTAAGgAGCAGGCCTTGTCACCATGTGTGTCTTCCATCAGAACAGCTCCcaccttcttcctccctccccaACATCCCTGGATCACAGAACAAGCAGAAATAGAGCAGCTGAAGCAGGAGCTGAACAGGAAGGAGtcggagatgcaggccctgcaGACCAAACtagaaacactgaccaatcagaattcAGACTGCAAGCAACACATCGAGGTGCTAAAGGAGTCGCTCAGCGCCAAGGAGCAACGGGCCAATACACTGCAGACAGAgGTAGATGCTCTGCGGGTGCGTCTGGAGGAGAAGGAGCAGCTCCTGACCAAGAAGACcaagcagctgcaggacctgacTGATGAAAAGAGCACACTAACAGGAGAGATCAGAGACATGAAGGACATGCTGGATGTCAAGGAGAGGAAGGTTAATGTCCTGCAGAAGAAGATTGAGAACCTGTTGGAGCAGTTAAAGGATAAGGACAAACAGCTGGCTGGGTTGAGGGAAAGGGTCCAGGGTCTTCAAACAGACTCCAGCAACACAGACACAGCCCTGGCCACACTGGAAGAAGCCCTATCAGAAAAGGAGCGAGTGATTGAGAATCTGCGCGAGCAGAAGGAGCGGGAAGACAGGGTTCGGCTGGAGGAGCTGGAACAGATGAGGAAGGAGAACCAGGTATTAAAGGACAAACTTTCAGCCTTGCAGCCCCAGAATCTGTCCCAGAGTCAGCCTGCTAACCCAGTCCTGACACAGAACCAGAGGCCTGATGGAGAGGTGCCAGCCAAAGTAGATGGGCTACCAGCAGGAAGCCCAACAacacaaaacacGGAAGAAGTAGTCCGGAAGTGTCCAGACATCACAGATCGTCTGAGGCTTCTGGAGCAGGAAGTTGCTCGCAACAAAGAGGAATCTGGGAAGTCGCAAGTGGAGGTGGAGAGGCTAATGACAGCTCTGAGGGATGCTGAGATGGACAAATCGTGCAAGGAGAAGAAAATTGCTGATCTTGAGAGACCTGGGCAAATCAACTCTCCTAACATCCAGAAGCAGACAGTGGCGAGTGAGATAAGGAAAGATGCCCTGATTGATGGACATCCACACTCTTTATCACAGAAAACTTCCTCTTTCAGCTTCCCAGGATGCCATGTGGGAGACGGCGGAGCGGATCAGGGAGTTGGAGAGGGCACTGAGGGAGAGCATGAACACCTCCGCACATAGAGAGGCTCTCTGGGCGCAAGAGGAGACTGCCCGTGTTCAGGCCCAAAGACAGTTGGAGGAACTGATGGGGGCTTTGGAGAAGACACGCCAGGAGCTGAATGCCACCAAGATGCATCTATCCTCCACTCAGCAGTCCCTGCATGAGAGAGACGGACACCTTAATAGTCTTCGCCAGGAGAGACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800957.1 True 3697 mRNA 0.54 19 19241532 19327554

Neighbor

gene id symbol gene type direction distance location
tlr9 NA coding upstream 923 19235549 ~ 19240609 (+)
apeh NA coding upstream 6146 19225260 ~ 19235386 (+)
LOC120559315 LOC103367228,LOC104955723 coding upstream 20597 19205219 ~ 19220935 (+)
LOC120558362 LOC104955725,LOC103367226 coding upstream 40041 19197807 ~ 19201491 (+)
LOC120559196 LOC104963628 coding upstream 295165 18943406 ~ 18946367 (+)
wnt5a wnt5a,LOC103367232,LOC102799772 coding downstream 39229 19366783 ~ 19415190 (+)
LOC120558919 LOC104941542 coding downstream 464626 19792180 ~ 19793225 (+)
LOC120558889 LOC104931868,LOC102202682,LOC102797917,LOC108235291 coding downstream 591840 19919394 ~ 19925436 (+)
kcna2b LOC104931876,LOC104941545,LOC103149635,LOC106925543,LOC107087053 coding downstream 614470 19942024 ~ 19951021 (+)
LOC120558887 LOC103360394,LOC100692715,LOC101485468,LOC102788976 coding downstream 645649 19973203 ~ 19976195 (+)
G51028 NA non-coding upstream 385006 18855367 ~ 18856526 (+)
LOC120559607 NA non-coding upstream 404101 18835280 ~ 18837431 (+)
G51017 NA non-coding upstream 483135 18758044 ~ 18758397 (+)
G50994 ncoa6,LOC105926085 non-coding upstream 553239 18686786 ~ 18688293 (+)
G50964 plcg1 non-coding upstream 601352 18636601 ~ 18640180 (+)
G51155 NA non-coding downstream 112133 19439687 ~ 19441326 (+)
G51165 LOC103362816 non-coding downstream 243639 19571193 ~ 19608956 (+)
G51167 LOC101075728,LOC104965662 non-coding downstream 260681 19588235 ~ 19590976 (+)
G51168 LOC102792445,LOC100695140,LOC103362820,LOC104933206,LOC101467308 non-coding downstream 263914 19591468 ~ 19593624 (+)
G51174 bgn non-coding downstream 289561 19617115 ~ 19618210 (+)
G50983 LOC103366028 other upstream 555230 18682143 ~ 18686302 (+)
opn7b LOC103364157,LOC103467481 other upstream 941199 18255892 ~ 18300333 (+)
LOC120559485 lime1,LOC103354460,LOC103467936,LOC105926125,LOC107096010,LOC103141841 other upstream 1455134 17741371 ~ 17786398 (+)
G50523 slc6a6,LOC104935489,LOC101165803,LOC100694392,LOC102780524 other upstream 2044359 17185911 ~ 17197173 (+)
eif2d eif2d other upstream 2246831 16977897 ~ 16994701 (+)
LOC120558947 lrtm1,LOC102799284 other downstream 128923 19456477 ~ 19463712 (+)
LOC120558920 LOC104941542 other downstream 440072 19767626 ~ 19768564 (+)
zgc:194242 NA other downstream 668923 19996477 ~ 20000438 (+)
LOC120558901 LOC104941554,LOC102293999,LOC103360402 other downstream 736438 20063992 ~ 20065735 (+)
LOC120559772 LOC108235180,LOC102301975,LOC103385136,LOC104941571,LOC107390930,LOC103360973,LOC101475964 other downstream 1118417 20445971 ~ 20532569 (+)

Expression


Co-expression Network