LOC120559389


Basic Information

Item Value
gene id LOC120559389
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 3178297 ~ 3185180 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801077.1
cacttcttatatgcaaatcagggggcgtggctatctctcacattcagaacagacaACAGAGCCGTGGGCAAAAAGAGGCTGGCAGTGGAAGGACTAGAAGTTAgaagctagctagttagctagctagttgtagCAGATAATGTCAATAGGGTCCTTACTGGTTAATTCATTACAATGTCTGAGAAAAGTATCTCAGACTTATTGAGAGCGGCTGCCAACTGCCTCGATGGGATGGAAACCACCACCAACAACCGACCACCACCTAGAGCTGCAGAAGTGGGAACCCCAAGCACAAGAACCCCTGTCCAAGcTGAAGTGGCGAGACTTTTCGCTCCCTACAGTGCTAGGCCAGCAAGACCTACAACAACAATGGCACCTCCTGCTAAAAGATTATGTCGGACGACGTATACACACACTTTCTTTTGCCTGAGTGACCATATGGGGGACAAAGTTCCAGCAAAAAGTGCCAAATTGGAATTAACAGCTGCTGGACTTGGAGAGAAACGGATCGCATTTCAAGTAAGAGAGGAAGATCATAAAAGTTTCCGCGACAAAATTGAGGAAGTCTTTCCGCAGTTGAAAGAAACAGGGGGGTTTCAACTGCTCAGGATTTCTGGGACAACACGGAGCAGAGATTTAACCCCAATCCCAAGCCCAGATGAAGGATACACTGTCCGGTACCTCTCCAACCCTGCAACTGGCATTGGACATGCCATGATTTACATCAGGCCATTgcaaaaaagtattgttttggaATGTATCCCAACATCCTTGCAACACCAAGGGCCGCTGACCAGATGCTTAACTTGTGACAAGGATTTCCCATTAAATCAGATGAGAAATCACATTGCCAAGTGTCCAtgTTTGCCCAGTGTTGCAGCAGCTTCTTCTGTTGACACTCAGAGTGAGCAAGCAGTAAATACTTCAAGCAGGACAGAGGAGCCATCTTGTAGCATCAGTGAACCTAGGACAGAGAAGCAGTCCTCGTCCTGTAGCATCAGTGAAGCCGTGAAAGTGCCATTAGATTTAGATTGGAAGTCTGAACCAGATGCAGCGAAAGCTGCAGAGCTATACAAGTCCAAATTACTTTACGAAAACGAGAACAAAAAAGCCATCCTGCTAAGAATGGACCTGCGGGACTCAGCAGAAGACCATCAGAGATCTTTAATCTCGACCTACAAGGCTCCAAAGACAGAGTGGGCTAGCCCTCTCAATTGTAAATTGGAAGGGGATGCAGCTGTCGGAGAGGGAGTCAACAGGTTCTTCCTCTCAAAAGCAATGACCCTTCTCCAGTTTGGATTGCACATAAATTTTGGGAACACCAGCCTCACACGGATGTTTGATGGAGAACCAGATCACCTAACTCCATCAACCGCTCAATTCCTTCTGGATAGTGACATGTTCCTCGTGGCAGGAAGGATGTTGGGCCACTCATTCCTACACAGTGGACCCTGTTTATCTGGCCTTAGTCCTGCAATAGTTCATGTGTTGTTTGGGGGATCACCAGAAACTACAACAATCCAAATTGCAGATTGCCCAGATATTGACATCTGCACTACTATCCAGTCGCTGGAGGGCAGTGCTGAGTTgacaaaagaggaagagaaagctGTCTTTGACCTTGCCTTGTCCTGGGACCTACCTGGTGTTACCAAAACCAACCGGAAGTGGCTGCATGAGCGGCTTCTATTCCATGCTGTGATTTCACGAACAAGCCGTCAAGTAAAGCAGCTAAGAAAAGGACTAAAGGAGACCATGGTTTGGCCCCTTCTGAAGGAGAGAGCAGACATCATACCCACATTTTTCCCAAGGAATTCAGAGGCTGCTCTCAGTTCTCATTTAATCATACAAAAGATCTTGTGGCCTGTgatggaagaggaggatgaggaagaaGTCTGTTTGGAGGACAAATGCAGAGTGGCAGGGTACCTGCGGTTCTTCATTGAAAATGCTTCCTGTACACAGCTCAAAAGACTCCTCCAATTCTGGACAGGATGGGAACTCCTGCCCAGTGAACTAGCACTGGAAGTGGTCAGCAGTGACTTTCCCAAGTCTTCGACATGTTTTGAAACACTTCGTCTTCCTGCACACTACAATGACTACAAAGCTTTTGCTAGTGACATTCAGGCCTGCCTCAACTCCACTGACACAGGCTTTGGTCTTATTTAGGATGGACTCGATGTCACAAGTCACTTAAACAAagtttaatttagtttagtATTATGTTCATGGGAGGTGTGGGGATTTTATTACAGACCATTACGGTTCCATTTCTTGGTCTAGTTCAGTTACACtcaggttcacaataaatgttgGCCCAGCTAGACGTGCTCCAAACCAAAAAGTGCAGTGCAGTCTTTAGGGCTGCTCcttcttagtcgattagtcgacttaGTAGGTTGTTTTGGTCAACCTAGATcgctttagtccattagtcatgtctgatgctgttttcatgctgaatgacttatttccaagaaacgtacgagcacatc
>XM_039801078.1
cacttcttatatgcaaatcagggggcgtggctatctctcacattcagaacagacaACAGAGCCGTGGGCAAAAAGAGGCTGGCAGTGGAAGGACTAGAAGTTAgaagctagctagttagctagctagttgtagCAGATAATGTCAATAGGGTCCTTACTGGTTAATTCATTACAATGTCTGAGAAAAGTATCTCAGACTTATTGAGAGCGGCTGCCAACTGCCTCGATGGGATGGAAACCACCACCAACAACCGACCACCACCTAGAGCTGCAGAAGTGGGAACCCCAAGCACAAGAACCCCTGTCCAAGcTGAAGTGGCGAGACTTTTCGCTCCCTACAGTGCTAGGCCAGCAAGACCTACAACAACAATGGCACCTCCTGCTAAAAGATTATGTCGGACGACGTATACACACACTTTCTTTTGCCTGAGTGACCATATGGGGGACAAAGTTCCAGCAAAAAGTGCCAAATTGGAATTAACAGCTGCTGGACTTGGAGAGAAACGGATCGCATTTCAAGTAAGAGAGGAAGATCATAAAAGTTTCCGCGACAAAATTGAGGAAGTCTTTCCGCAGTTGAAAGAAACAGGGGGGTTTCAACTGCTCAGGATTTCTGGGACAACACGGAGCAGAGATTTAACCCCAATCCCAAGCCCAGATGAAGGATACACTGTCCGGTACCTCTCCAACCCTGCAACTGGCATTGGACATGCCATGATTTACATCAGGCCATTgcaaaaaagtattgttttggaATGTATCCCAACATCCTTGCAACACCAAGGGCCGCTGACCAGATGCTTAACTTGTGACAAGGATTTCCCATTAAATCAGATGAGAAATCACATTGCCAAGTGTCCAtgTTTGCCCAGTGTTGCAGCAGCTTCTTCTGTTGACACTCAGAGTGAGCAAGCAGTAAATACTTCAAGCAGGACAGAGGAGCCATCTTGTAGCATCAGTGAACCTAGGACAGAGAAGCAGTCCTCGTCCTGTAGCATCAGTGAAGCCGTGAAAGTGCCATTAGATTTAGATTGGAAGTCTGAACCAGATGCAGCGAAAGCTGCAGAGCTATACAAGTCCAAATTACTTTACGAAAACGAGAACAAAAAAGCCATCCTGCTAAGAATGGACCTGCGGGACTCAGCAGAAGACCATCAGAGATCTTTAATCTCGACCTACAAGGCTCCAAAGACAGAGTGGGCTAGCCCTCTCAATTGGGATGCAGCTGTCGGAGAGGGAGTCAACAGGTTCTTCCTCTCAAAAGCAATGACCCTTCTCCAGTTTGGATTGCACATAAATTTTGGGAACACCAGCCTCACACGGATGTTTGATGGAGAACCAGATCACCTAACTCCATCAACCGCTCAATTCCTTCTGGATAGTGACATGTTCCTCGTGGCAGGAAGGATGTTGGGCCACTCATTCCTACACAGTGGACCCTGTTTATCTGGCCTTAGTCCTGCAATAGTTCATGTGTTGTTTGGGGGATCACCAGAAACTACAACAATCCAAATTGCAGATTGCCCAGATATTGACATCTGCACTACTATCCAGTCGCTGGAGGGCAGTGCTGAGTTgacaaaagaggaagagaaagctGTCTTTGACCTTGCCTTGTCCTGGGACCTACCTGGTGTTACCAAAACCAACCGGAAGTGGCTGCATGAGCGGCTTCTATTCCATGCTGTGATTTCACGAACAAGCCGTCAAGTAAAGCAGCTAAGAAAAGGACTAAAGGAGACCATGGTTTGGCCCCTTCTGAAGGAGAGAGCAGACATCATACCCACATTTTTCCCAAGGAATTCAGAGGCTGCTCTCAGTTCTCATTTAATCATACAAAAGATCTTGTGGCCTGTgatggaagaggaggatgaggaagaaGTCTGTTTGGAGGACAAATGCAGAGTGGCAGGGTACCTGCGGTTCTTCATTGAAAATGCTTCCTGTACACAGCTCAAAAGACTCCTCCAATTCTGGACAGGATGGGAACTCCTGCCCAGTGAACTAGCACTGGAAGTGGTCAGCAGTGACTTTCCCAAGTCTTCGACATGTTTTGAAACACTTCGTCTTCCTGCACACTACAATGACTACAAAGCTTTTGCTAGTGACATTCAGGCCTGCCTCAACTCCACTGACACAGGCTTTGGTCTTATTTAGGATGGACTCGATGTCACAAGTCACTTAAACAAagtttaatttagtttagtATTATGTTCATGGGAGGTGTGGGGATTTTATTACAGACCATTACGGTTCCATTTCTTGGTCTAGTTCAGTTACACtcaggttcacaataaatgttgGCCCAGCTAGACGTGCTCCAAACCAAAAAGTGCAGTGCAGTCTTTAGGGCTGCTCcttcttagtcgattagtcgacttaGTAGGTTGTTTTGGTCAACCTAGATcgctttagtccattagtcatgtctgatgctgttttcatgctgaatgacttatttccaagaaacgtacgagcacatc

Function

GO: NA

KEGG:

id description
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801077.1 True 2495 mRNA 0.46 13 3178297 3185180
XM_039801078.1 False 2483 mRNA 0.46 13 3178297 3185180

Neighbor

gene id symbol gene type direction distance location
LOC120558536 NA coding upstream 351585 2825257 ~ 2826712 (+)
LOC120558526 NA coding upstream 421250 2753513 ~ 2757047 (+)
LOC120559413 NA coding upstream 515955 2661572 ~ 2662342 (+)
LOC120558523 NA coding upstream 530830 2645892 ~ 2647467 (+)
LOC120558519 NA coding upstream 627573 2548939 ~ 2550724 (+)
LOC120559447 lactbl1,LOC103362248,LOC100707689,LOC101473793,LOC102312186 coding downstream 540781 3725961 ~ 3734391 (+)
LOC120558400 NA coding downstream 773376 3958556 ~ 3982281 (+)
LOC120558402 LOC103357835,LOC104954328 coding downstream 820085 4005265 ~ 4014601 (+)
mfn2 mfn2 coding downstream 845343 4030523 ~ 4059713 (+)
LOC120559787 LOC103357833 coding downstream 899514 4084694 ~ 4180336 (+)
LOC120559441 NA non-coding upstream 142362 3018811 ~ 3035935 (+)
LOC120559422 NA non-coding upstream 200603 2976616 ~ 2977694 (+)
LOC120559417 NA non-coding upstream 202727 2974854 ~ 2975570 (+)
LOC120559432 NA non-coding upstream 298555 2879162 ~ 2879742 (+)
G46577 NA non-coding upstream 316475 2663906 ~ 2861822 (+)
LOC120559445 NA non-coding downstream 475410 3660590 ~ 3661927 (+)
LOC120559446 NA non-coding downstream 521425 3706605 ~ 3719155 (+)
G46996 NA non-coding downstream 681971 3867151 ~ 3870238 (+)
G46997 NA non-coding downstream 685195 3870375 ~ 3872139 (+)
G47006 NA non-coding downstream 693612 3878792 ~ 3881000 (+)
G46574 NA other upstream 407844 2745898 ~ 2770453 (+)
G46530 NA other upstream 787785 2389946 ~ 2390512 (+)
LOC120558501 NA other upstream 838868 2337336 ~ 2339429 (+)
LOC120559409 NA other upstream 945638 2205341 ~ 2232659 (+)
G46328 NA other upstream 1540127 1635948 ~ 1638170 (+)
LOC120559414 NA other downstream 94181 3279361 ~ 3304637 (+)
LOC120559404 NA other downstream 262924 3448104 ~ 3514758 (+)
gpr173 LOC104932793,LOC101475032,LOC100694027,LOC104957049 other downstream 657884 3843064 ~ 3865798 (+)
LOC120559501 NA other downstream 1587752 4772932 ~ 4775358 (+)
G47444 NA other downstream 3013866 6199046 ~ 6200594 (+)

Expression


Co-expression Network