LOC120559413


Basic Information

Item Value
gene id LOC120559413
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 2661572 ~ 2662342 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801113.1
ctcagctgtgcttttcctgctatgacaagtcaacatgtctgctgtgaaaaagAACGACGTGATGCAGACAGGAAGCTGCCTCGACCTGACGACGTGGGACGATGAGACCCCCGGCCCATcctacaccaccaccaccgatGGGTGTGGAGACGAGGACGAGTGTCTGATCGTCGGCTACAAGAAGCCGCCGCTCAGCGGCGCCACCGACGCCACCGACGCCACCAATGGGCGCGCAGACGAGGACGAGTGTGTGATCGTCGGCTATAAGAAGCCGATCGCTGAGGACGGAGGAGAAACTTCCTCCACTCGCCTTCCTACCCACTCAGAGACAGACGAGGAAGAGGAGACGACGTCTGCAGCtgagattataataaataataaatcaaagaAACAACAAGAATAGAACTCAATTTAAAGCTCCGTAAACTTCTTCACTCAATAATCCATATCTTAAGAAATAAGTCTGTATatttaagaaaacatttgaaatatttgtcattaaaagtc

Function

GO: NA

KEGG:

id description
ko03020 RNA polymerase
ko04623 Cytosolic DNA-sensing pathway

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801113.1 True 507 mRNA 0.49 2 2661572 2662342

Neighbor

gene id symbol gene type direction distance location
LOC120558523 NA coding upstream 14105 2645892 ~ 2647467 (+)
LOC120558519 NA coding upstream 110848 2548939 ~ 2550724 (+)
LOC120559387 NA coding upstream 240714 2413571 ~ 2420858 (+)
LOC120558473 LOC103372586 coding upstream 1053127 1568295 ~ 1608445 (+)
adrm1 NA coding upstream 1608562 1048972 ~ 1053010 (+)
LOC120558526 NA coding downstream 91171 2753513 ~ 2757047 (+)
LOC120558536 NA coding downstream 162915 2825257 ~ 2826712 (+)
LOC120559389 NA coding downstream 515955 3178297 ~ 3185180 (+)
LOC120559447 lactbl1,LOC103362248,LOC100707689,LOC101473793,LOC102312186 coding downstream 1063619 3725961 ~ 3734391 (+)
LOC120558400 NA coding downstream 1296214 3958556 ~ 3982281 (+)
LOC120559425 NA non-coding upstream 15818 2637964 ~ 2645754 (+)
G46564 NA non-coding upstream 57317 2603198 ~ 2604255 (+)
G46558 NA non-coding upstream 95257 2565724 ~ 2566315 (+)
G46523 NA non-coding upstream 314015 2344461 ~ 2347557 (+)
G46511 NA non-coding upstream 339543 2321337 ~ 2322029 (+)
G46577 NA non-coding downstream 1564 2663906 ~ 2861822 (+)
LOC120559439 NA non-coding downstream 193215 2855557 ~ 2856180 (+)
LOC120559432 NA non-coding downstream 216820 2879162 ~ 2879742 (+)
LOC120559417 NA non-coding downstream 312512 2974854 ~ 2975570 (+)
LOC120559422 NA non-coding downstream 314274 2976616 ~ 2977694 (+)
G46530 NA other upstream 271060 2389946 ~ 2390512 (+)
LOC120558501 NA other upstream 322143 2337336 ~ 2339429 (+)
LOC120559409 NA other upstream 428913 2205341 ~ 2232659 (+)
G46328 NA other upstream 1023402 1635948 ~ 1638170 (+)
G46305 NA other upstream 1138341 1522685 ~ 1523231 (+)
G46574 NA other downstream 83556 2745898 ~ 2770453 (+)
LOC120559392 NA other downstream 484139 3146481 ~ 3288089 (+)
LOC120559414 NA other downstream 617019 3279361 ~ 3304637 (+)
LOC120559404 NA other downstream 785762 3448104 ~ 3514758 (+)
gpr173 LOC104932793,LOC101475032,LOC100694027,LOC104957049 other downstream 1180722 3843064 ~ 3865798 (+)

Expression


Co-expression Network