qars1 (qars,LOC102790389)


Basic Information

Item Value
gene id qars1
gene name qars,LOC102790389
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 16709978 ~ 16718188 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801226.1
TCCCCTCCTCGCTCTCTCTCCGAGAAGAAAACTTGTGTGTGGCGGTGGCGTGTCTGAGTGGTTCCGATCGGTGGAAAAATGGCAGATACGGTGGCACTTTTCACTTCCATTGGGCTCAGTGAGCAGAAAGCGAAAGAAACTCTGAAAAATGAAGCGCTGAGTTCTGCCTTGAAGGACGCAATTGTTCAGGCCCAACGAGTCCGTGGGGCATCAGGAGTGGACAAAGCCATGGGCACATTGCTGTACAGTATGGCATCTCGCCTTAAAGACACCAGACGCCTGGCATTCCTTTCAGACTGCATAGTTCAGTGGAAAATCACCACAGAGCTACAGCTGGCAGCTGCACTTGAATTTGTGAAGAGTCATCCTCAGGACCCCATCAACCAGAGGGAGTTTGAAGAAGCATGTggagtgggcgtggtcataacCCCGGAACAAATTGAGGATGGAGTTGAATCGGTGATCAAGAAGCACAAGGAACAGCTGTTAAAGGAGAGGTACCACTTCAACATGGGACTGCTGATGGGAGAGGCACGCTCTGCCCTTAAATGGGCTGATGGAAAGGTCGTCAAAAATGAGGTGGACATGCAGGTCCTACACCTCTTAGGACCCAAGACCGAGGCTGACCTGGAAAAGAAACCTAAGCCCCAGAAAGCTAAAGTCGCAGAGAATGAAGTAAAGGCAAAGAAAGAGGAGGTGGCAGTGAATGGTGAGGCGATGACTGGGGAGGGAAAGTCACTTATGGAGCAGCTCAGAGGAGAAGCTCTGAAGTTCCATAAACCAGGAGAGAACTATAAAACTGAGGGCTATGTGGTCACACCAAAAACAATGGACTTGCTTAAAAAGCACATGGAGATCACTGGTGGACAGATACGTTCTCGTTTTCCTCCTGAGCCCAACGGTATCCTTCACATTGGACACGCCAAAGCTATCAATTTTAATTTTGGTTATGCAAAGGCAAACAATGGCATTTGTTTCTTGAGGTATGATGACACAAAtccagagaaagaggaggagaaataCTTCACTGGTATCAAGGACATGGTGGAGTGGCTTGGCTACGAACCTCATGCTGTCACGCATGCATCCGACAACTTTCAGCAACTCTACGACCTCGCTGTGGATTTAATTCGCAGGGGTCATGCGTACGTGTGCCACCAGAAAGGGGAGGAACTGAAGGGCCATAACGCTCCTCCGTCCCCCTGGAGAGACCGACCCATTGAGGAGTCGCTGGTGTTGTTTGAGAGGATGAAAAAGGGGCTGTTTGCTGAGGGAGAGGCTACGCTCAGGATGAAGATGGTCATGGAGGACGGGAAGATGGACCCCGTGGCGTACCGAATCAAATACACGCCACATCATCGGACAGGGGATGAATGGTGCATCTACCCCACGTATGACTACACCCACTGTCTGTGTGACTCCATTGAAAATATCACACACTCCCTCTGTACCAAAGAGTTTCAGGCCAGGCGTTCATCATATTACTGGCTGTGTAATGCTCTGGATGTATACTGCCCAGTTCAGTGGGAATATGGGCGCTTGAACCTCACCTACACTGTTGTGTCAAAGAGGAAAATCATCAGACTGGTAGAGGCTGGTGTTGTCAGAGACTGGGACGATCCCCGACTCTTCACTCTGACTGCGCTGAGGAGAAGAGGTTTCCCAGCAGAGGCAATTAACAACTTCTGTGCACGGGTCGGAGTCACAGTTTCCCAGACGACGACAGAGCCCCACCTTCTGGAATCGTGTGTGAGGGACGTGTTGAACGACACTGCACCCAGAGCCATGGCTGTGTTGGAACCACTTAAAGTCACCATAACTAACCTACCTGCGAACTCAAAGTCAGAAGTACGAGTGCCAGACTTTCCTGCCAACGAGGCCAAGGGCAGCCACACCGTCCCATTTACACACACAATCTTCATTGAACAGAGTGACttcagagagGTATTGGAAAAGGGTTACAAGCGTTTGACTCCAGAACAGCCTGTAGGTCTAAGGCACGCTGGGTATGTCATCTCTGTCCAGAAGGTCATCAAGGACACTCAGGGTAAAGTGGTTGAACTGGAGGTGAGCTGTTGCAATTCTGAGAATGCAGAGAAACCAAAGGCCTTTATCCACTGGGTCAGCCAGCCATTGATGTGTGAAGTGCGCCTTTATGAAAGACTATTCCTGCACAAACATCCAGAGGATCCGTCTGAAGTGCCCAATGGCTTCCTGAGTGACATCAATCCTAATTCCCTGCTTGTGATCAGCAGTGCCTTAGTTGATACCTCAGTAAAGGGAGCAAAGGTTTTTGACAAATTCCAGTTTGAGAGAGTCGGCTACTTCTCCCTGGACCCCGACAGCACTGCAGACAAGCTCGTCTTCAACAGAACAGTCACCCTCAAAGAAGACCCTGGGAAGATCTAATTGACAGAGATCAAGCCGCTTCACATGAGCCCACAGATACATGTCCAAATTGTTTGCATCAATTAATGTGTAACATCAGCAAGGGCACAGACTGATCGAGTTGAGATTGACTCAGAAAAGATACCGTAATAATTACATGTCcatatttttttctaaactgCAGTTCTCTTTCATGGATCTGTGTTGCTGAAATTGGGAAAATATAATTGTCGGCTGCGAAAACAAAATTACTGCAGTATCACTTCTCACAATCTCAACTTTGGTCACTCAGTGTAAGAGTCCTCTTGACTCATTTTTCTATATCTGCTGCAATAATATTCACTTACAGTGTTTCTTCTTTGTTGAATTGATGCAACTCTGATCATTGTTCAACAAGGATGACATGTATATTATTGTAATATTGGCTCGAAACTGGTGTTACACAGGAGATGCTCTCAAATGGAATGCATGACTTTCTTACAAAGGTGGTAGATCCTTGCCAAACCATAATGTGTTTTTTAGACTCAGAGGGGTGAAcgtgtgtcattttgacacgtgacaagaataaataatataaaataaaaaacctg

Function

symbol description
qars Predicted to enable several functions, including glutamine-tRNA ligase activity; protein kinase binding activity; and protein kinase inhibitor activity. Predicted to be involved in several processes, including glutaminyl-tRNA aminoacylation; negative regulation of nitrogen compound metabolic process; and negative regulation of signal transduction. Predicted to act upstream of or within negative regulation of apoptotic process. Part of aminoacyl-tRNA synthetase multienzyme complex. Is expressed in several structures, including alimentary system; brain; genitourinary system; respiratory system; and sensory organ. Orthologous to human QARS1 (glutaminyl-tRNA synthetase 1).

NR:

description
glutamine--tRNA ligase

GO:

id name namespace
GO:0006425 glutaminyl-tRNA aminoacylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0005524 ATP binding molecular_function
GO:0004819 glutamine-tRNA ligase activity molecular_function

KEGG:

id description
K01886 QARS, glnS; glutaminyl-tRNA synthetase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801226.1 True 2978 mRNA 0.47 23 16709978 16718188

Neighbor

gene id symbol gene type direction distance location
LOC120559511 LOC102311931,LOC106676355,LOC102214845,LOC102799804 coding upstream 30634 16670828 ~ 16679344 (+)
LOC120559510 LOC102311931,LOC106676355,LOC102214845 coding upstream 43329 16660467 ~ 16666649 (+)
b3galt4 b3galt4,LOC104957801,LOC102791999 coding upstream 60831 16646183 ~ 16649147 (+)
LOC120559103 rbsn coding upstream 84560 16618463 ~ 16625418 (+)
trh trh coding upstream 96190 16611217 ~ 16613788 (+)
LOC120559487 qrich1,LOC103362963 coding downstream 984 16719172 ~ 16726239 (+)
LOC120559776 NA coding downstream 14806 16732994 ~ 16740699 (+)
LOC120559617 LOC107391139,LOC106528268 coding downstream 100651 16818839 ~ 16820426 (+)
ren ren,ctse coding downstream 216689 16934877 ~ 16940282 (+)
csf1b NA coding downstream 228973 16947161 ~ 16954280 (+)
LOC120559512 NA non-coding upstream 26444 16680581 ~ 16683534 (+)
G50326 NA non-coding upstream 83760 16605965 ~ 16626218 (+)
G50320 NA non-coding upstream 128985 16580059 ~ 16580993 (+)
G50318 NA non-coding upstream 140596 16567001 ~ 16569382 (+)
LOC120558722 NA non-coding upstream 164143 16544269 ~ 16545835 (+)
G50410 LOC103368435 non-coding downstream 108692 16826880 ~ 16829880 (+)
G50493 LOC103467546,LOC102230394,LOC105927130,LOC106947997,LOC103145058,LOC101167287,LOC104935375,LOC108231917 non-coding downstream 380434 17098622 ~ 17104964 (+)
G50505 LOC103354436 non-coding downstream 416500 17134688 ~ 17135490 (+)
G50509 NA non-coding downstream 432994 17151182 ~ 17151913 (+)
G50518 NA non-coding downstream 444991 17163179 ~ 17163665 (+)
LOC120559923 NA other upstream 301517 16397669 ~ 16408461 (+)
brpf1 brpf1 other upstream 313770 16380044 ~ 16396208 (+)
LOC120559119 LOC104967193 other upstream 330333 16322821 ~ 16379645 (+)
LOC120559121 NA other upstream 398961 16304312 ~ 16311017 (+)
slc6a1a iqsec1,LOC104940213,LOC107088165 other upstream 740647 15885990 ~ 15969331 (+)
eif2d eif2d other downstream 259709 16977897 ~ 16994701 (+)
G50523 slc6a6,LOC104935489,LOC101165803,LOC100694392,LOC102780524 other downstream 467723 17185911 ~ 17197173 (+)
LOC120559485 lime1,LOC103354460,LOC103467936,LOC105926125,LOC107096010,LOC103141841 other downstream 1023183 17741371 ~ 17786398 (+)
opn7b LOC103364157,LOC103467481 other downstream 1537704 18255892 ~ 18300333 (+)
G50983 LOC103366028 other downstream 1963955 18682143 ~ 18686302 (+)

Expression


Co-expression Network