LOC120559510 (LOC102311931,LOC106676355,LOC102214845)


Basic Information

Item Value
gene id LOC120559510
gene name LOC102311931,LOC106676355,LOC102214845
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 16660467 ~ 16666649 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801230.1
AGGGGAATACAATGTAAAGGCCTGGACATCTGGAAAGGGGAGGGCCTGGATATTATATCTGTCTGAGCCTCCAATTACAATTGAGAAAGTGTTATGCAacaagaagagagaggaaggaaaacaGATTGCTTATCTGAGAAAAATCCGagcagaagaaagagaaaagtgtCCGAAATACAGCAGAGAAACCAGCAGCATTCAGAATGTCATTTGATCCGGACAAGATCTCTCGACCAGAAATCTTTGATTTCCATGGCGTCTCAATGACTCACTTTTTCACAGACAACTGGGAGAACATTCAAAACTTTCAGGCCAGGCCAGATGATATACTTATTGCAACATACCCGAAAGCAGGAACCACATGGGTCTCCTACATCCTCGACCTGCTGTATTTTGGTCAGACAGAGCGTCAGACATCCATCCCAATCTTTGAAAGAGTGCCTTTTTTGGAGATCATCGTCCCGTCTTTCGGTTCAGGAAAAGACCATGCAGACAACCTCCTGACTTCTCCTCGACTCATTAAAACTCACTTTCCATTCCAGTTCGTGCCAAAGTCCTTTTGGGAGCAAAACTGCAGGaTGGTCTACGTGGCCCGCAATGCCAAAGACAACATGGTGTCTTATTTTCACTTTGATCGCATGAACAAGATTCAGCCAGAGCCGGGAGAATGGAGCAGCTACATCCACAGATTCATGGAGGGAAAGATGGTGTTTGGATCCTGGTATGACCATGTGAACGGCTGGTGGAAGAAGAAACAGACTTACTCAAAACTCCATTACATGTTCTACGAAGATCTGATTGAGGATACTGGACGGGAAATAGACAAACTCTGCTCCTTTCTTGGTTTGTCTCGTTCAGTcgaggagaagaaaagagttaCAAGTGGAGTGCAGTTTGACAATATGAAAAAGAACGACATGACCAACTACTCTACGAACTTTGTTATGGACTTCAAAATTTCTCCTTTTATGAGAAAAGGGAAGGTTGGTGACTGGAAGAACCATTTCACTGTGGCCCAGAATGAACAGTTTGATGAAGACTACAAGAAAAAGATGAAGAATTCCACACTTCAGTTCCGCACTGAAATTTAAACAGGACTGGACAGGCTGTGTATATTTGGAGATGGATCTATGACGGACTGGACATGTGGTGTTTCTATGAAAAAATCAAGTTACAGTTGCTTCTAATGCAGTGATTTCTCAAAGTGGGGTTTGTGGCACTCTCCCAGGGGATCCGTGAAAAGtttcacattcattcatttaaattatcatgatgtaggctaatgtttttttttttcaaaaggctTTAGAGTTCCacaaataatattttaattCTTAAATCTATAATAGTTCATAGATAAATTTCATAGATTTCATATTTCTTTCATAACAAGAAAATGTAGCACgtagaaaattaaccaatgatGTAATTGGTCAAAAATCCTTAAATAAAAAACTGTATAGTATCCTGTCCACCATATTGTCCACATGTACAGTCTAACTCTTCAGAAGAATGAAATGTTAATGTGTAATTAAAGAGCAGCTGTATGACTAAACAATTTACACTGATATTCTCTAATGAG

Function

NR:

description
PREDICTED: cytosolic sulfotransferase 3-like

GO: NA

KEGG:

id description
K01014 SULT1A; aryl sulfotransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801230.1 True 1582 mRNA 0.40 8 16660467 16666649

Neighbor

gene id symbol gene type direction distance location
b3galt4 b3galt4,LOC104957801,LOC102791999 coding upstream 11320 16646183 ~ 16649147 (+)
LOC120559103 rbsn coding upstream 35049 16618463 ~ 16625418 (+)
trh trh coding upstream 46679 16611217 ~ 16613788 (+)
LOC120558717 rho coding upstream 200476 16451768 ~ 16459991 (+)
ift122 ift122,LOC102796889 coding upstream 209837 16429579 ~ 16450630 (+)
LOC120559511 LOC102311931,LOC106676355,LOC102214845,LOC102799804 coding downstream 4179 16670828 ~ 16679344 (+)
qars1 qars,LOC102790389 coding downstream 43329 16709978 ~ 16718188 (+)
LOC120559487 qrich1,LOC103362963 coding downstream 52523 16719172 ~ 16726239 (+)
LOC120559776 NA coding downstream 66345 16732994 ~ 16740699 (+)
LOC120559617 LOC107391139,LOC106528268 coding downstream 152190 16818839 ~ 16820426 (+)
G50326 NA non-coding upstream 34249 16605965 ~ 16626218 (+)
G50320 NA non-coding upstream 79474 16580059 ~ 16580993 (+)
G50318 NA non-coding upstream 91085 16567001 ~ 16569382 (+)
LOC120558722 NA non-coding upstream 114632 16544269 ~ 16545835 (+)
G50280 NA non-coding upstream 234647 16425618 ~ 16425820 (+)
LOC120559512 NA non-coding downstream 13932 16680581 ~ 16683534 (+)
G50410 LOC103368435 non-coding downstream 160231 16826880 ~ 16829880 (+)
G50493 LOC103467546,LOC102230394,LOC105927130,LOC106947997,LOC103145058,LOC101167287,LOC104935375,LOC108231917 non-coding downstream 431973 17098622 ~ 17104964 (+)
G50505 LOC103354436 non-coding downstream 468039 17134688 ~ 17135490 (+)
G50509 NA non-coding downstream 484533 17151182 ~ 17151913 (+)
LOC120559923 NA other upstream 252006 16397669 ~ 16408461 (+)
brpf1 brpf1 other upstream 264259 16380044 ~ 16396208 (+)
LOC120559119 LOC104967193 other upstream 280822 16322821 ~ 16379645 (+)
LOC120559121 NA other upstream 349450 16304312 ~ 16311017 (+)
slc6a1a iqsec1,LOC104940213,LOC107088165 other upstream 691136 15885990 ~ 15969331 (+)
eif2d eif2d other downstream 311248 16977897 ~ 16994701 (+)
G50523 slc6a6,LOC104935489,LOC101165803,LOC100694392,LOC102780524 other downstream 519262 17185911 ~ 17197173 (+)
LOC120559485 lime1,LOC103354460,LOC103467936,LOC105926125,LOC107096010,LOC103141841 other downstream 1074722 17741371 ~ 17786398 (+)
opn7b LOC103364157,LOC103467481 other downstream 1589243 18255892 ~ 18300333 (+)
G50983 LOC103366028 other downstream 2015494 18682143 ~ 18686302 (+)

Expression


Co-expression Network