LOC120559511 (LOC102311931,LOC106676355,LOC102214845,LOC102799804)


Basic Information

Item Value
gene id LOC120559511
gene name LOC102311931,LOC106676355,LOC102214845,LOC102799804
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 16670828 ~ 16679344 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801232.1
ATGGAGAAAGTGTTATGCAacaagaagagagaggaaggaaaacaGATTGCTTATCTGAGAAAAATCCGagcagaagaaagagaaaagtgtCCAAAATACAGCAGAGAAACCAGCAGCATTCAGAATGTCATTTGATCCGGACAAGATCTCTCGACCAGAAATCTTTGATTTCCACGGAGTCTCAATGATTAACTTTTTCACAGACAACTGGGAGAACATTCAAAACTTTCAGGCCAGGCCAGATGATATACTTATTGCAACATACCCGAAAGCAGgAACCACATGGGTCTCCTACATCCTTGACCTGCTGTATTTTGGTCAGACAGAGCGTCAGACATCCATCCCAATCTTTGAAAGAGTGCCTTTTTTGGAGCTCATCGTCCCGTCTTTCGGTTCAGGAAAAGACCAGGCAGACAACCTCCTGACTTCTCCTCGACTCATTAAAACTCACTTTCCATTCCAATTTGTGCCAAAGTCCTTTTGGGAGCAAAACTGCAGGaTGGTCTACGTGGCCCGCAATGCCAAAGACAACATGGTGTCTTATTTTCACTTTGATCGCATGAACAAGATTCAGCCAGAGCCGGGAGAATGGAGCAGCTACATCCACAGATTCATGGAGGGAAAGATGGTGTTTGGATCCTGGTATGACCATGTGAACGGCTGGTGGAAGAAGAAACAAACTTACTCAAAACTCCATTACATGTTCTACGAAGATCTGATTGAGGATACTGGACGGGAAATAGACAAACTCTGCTCCTTTCTTGGTTTGTCTCGTTCAGTcgaggagaagaaaagagttaCAAGTGGAGTGCAGTTTGACAATATGAGAAAGGACGACATGGCCAATTACTCTACAAACTTTTTTATGGATTTCAAAATTTCTCCTTTTATGAGAAAAGGGCAGGTTGGTGACTGGAAGAACCATTTCACTGTGGCCCAGAATGAACAGTTTGATGAAGATTACAAGAAAAAGATGAAGAATTCCACACTTCAGTTCCGCACTGAAATTTAAACAGGACTGGACAGGCTGTGTATATTTGGAGATGGATCTATGACGGACTGGACATGTGGTGTTTCTATGAAAAAATCAAGTTACAGTTGCTTCTAATGCAGTGATTTCTCAAAGTGGGGTTTGTGGCACTCTCCCAGGGGATCCGTGAAAAGttttcacattcattcatttaaattatcatgatgtaggctaatgttgtttttttttcaaaaggctTTAGAGTTCcacaaataatattt

Function

NR:

description
PREDICTED: cytosolic sulfotransferase 3-like

GO: NA

KEGG:

id description
K01014 SULT1A; aryl sulfotransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801232.1 True 1251 mRNA 0.42 8 16670828 16679344

Neighbor

gene id symbol gene type direction distance location
LOC120559510 LOC102311931,LOC106676355,LOC102214845 coding upstream 4179 16660467 ~ 16666649 (+)
b3galt4 b3galt4,LOC104957801,LOC102791999 coding upstream 21681 16646183 ~ 16649147 (+)
LOC120559103 rbsn coding upstream 45410 16618463 ~ 16625418 (+)
trh trh coding upstream 57040 16611217 ~ 16613788 (+)
LOC120558717 rho coding upstream 210837 16451768 ~ 16459991 (+)
qars1 qars,LOC102790389 coding downstream 30634 16709978 ~ 16718188 (+)
LOC120559487 qrich1,LOC103362963 coding downstream 39828 16719172 ~ 16726239 (+)
LOC120559776 NA coding downstream 53650 16732994 ~ 16740699 (+)
LOC120559617 LOC107391139,LOC106528268 coding downstream 139495 16818839 ~ 16820426 (+)
ren ren,ctse coding downstream 255533 16934877 ~ 16940282 (+)
G50326 NA non-coding upstream 44610 16605965 ~ 16626218 (+)
G50320 NA non-coding upstream 89835 16580059 ~ 16580993 (+)
G50318 NA non-coding upstream 101446 16567001 ~ 16569382 (+)
LOC120558722 NA non-coding upstream 124993 16544269 ~ 16545835 (+)
G50280 NA non-coding upstream 245008 16425618 ~ 16425820 (+)
LOC120559512 NA non-coding downstream 1237 16680581 ~ 16683534 (+)
G50410 LOC103368435 non-coding downstream 147536 16826880 ~ 16829880 (+)
G50493 LOC103467546,LOC102230394,LOC105927130,LOC106947997,LOC103145058,LOC101167287,LOC104935375,LOC108231917 non-coding downstream 419278 17098622 ~ 17104964 (+)
G50505 LOC103354436 non-coding downstream 455344 17134688 ~ 17135490 (+)
G50509 NA non-coding downstream 471838 17151182 ~ 17151913 (+)
LOC120559923 NA other upstream 262367 16397669 ~ 16408461 (+)
brpf1 brpf1 other upstream 274620 16380044 ~ 16396208 (+)
LOC120559119 LOC104967193 other upstream 291183 16322821 ~ 16379645 (+)
LOC120559121 NA other upstream 359811 16304312 ~ 16311017 (+)
slc6a1a iqsec1,LOC104940213,LOC107088165 other upstream 701497 15885990 ~ 15969331 (+)
eif2d eif2d other downstream 298553 16977897 ~ 16994701 (+)
G50523 slc6a6,LOC104935489,LOC101165803,LOC100694392,LOC102780524 other downstream 506567 17185911 ~ 17197173 (+)
LOC120559485 lime1,LOC103354460,LOC103467936,LOC105926125,LOC107096010,LOC103141841 other downstream 1062027 17741371 ~ 17786398 (+)
opn7b LOC103364157,LOC103467481 other downstream 1576548 18255892 ~ 18300333 (+)
G50983 LOC103366028 other downstream 2002799 18682143 ~ 18686302 (+)

Expression


Co-expression Network