LOC120559525 (LOC107391160,LOC103467615,LOC107090264,LOC102789905,LOC104951673)


Basic Information

Item Value
gene id LOC120559525
gene name LOC107391160,LOC103467615,LOC107090264,LOC102789905,LOC104951673
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 14892057 ~ 14898107 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801261.1
CGCAGACAGACGGACAGCCAGAAAGACAGACTGATATACAGcgagaaaaaaacaactgagtTTGAAATGACGTGGCGTGAGGCCACCTTTGTTTATGTCCCCTTTCTTTGAGGAGCTACGTAGTAAGCAGTTCTGGCGCGCCATTCTTGCAGAGCTGCTTGGCACCCTGGTTTTAGTGAGCGCCGTGCTGGGTGCATCTGTGCCAGGCCCTGGAGAGGCCCCCACGGGACCCCTGTACCCAGCAGTGGCAGTGGGTGTGACGATTGTCGCACTGGGACACTGTTTTGGAGAAATAAGCGGGGCACAGGTGaaccctgcagtgactctggcTCTGTTGGCCACTCGGAAGCTGGAAGTGGTCAGAGCTGTTGTTTACATGGCTGCACAGTGTTTGGGGGCCTCTTTAGGAGCTGGGGCCCTCTACTTGGCCCTGCCAGTCAAAACCACTGCAGACCACTTTGTCAACAGGGTTCCTATAGAGTTAAATGCAGCCCAGGCTCTGGGCATGGAGGTTTTGTGCACCTTCCAGATGGTCTTCACTGTGTTCTCAGTAGAGGATCAGCGGCGGAGGGAAAGCCCAGAACCAGGAAACCTGGCCATTGGATTAGCACACACTGCTGGAGTGCTAATAGGGGGGCGGTTCTCTGGTGCTAGTATGAATCCCGCACGTTCTCTGGGTCCAGCCATCATCACTGGATTCTGGGAAAACCactggGTTTATTTGATCGGACCAGTGATCGGTGCTATACTGGCTGGAGTGTCCCATGAGTTCTTCTTTGCACAAAGCGCCTCTCGCCAGAAGCTGGTGGCTTGTCTGACCTGTAAGGACATAGAGATTGTGGAGACGACCAGCATGACGGGATCATCTCTGTCCACAGTCACACCAAACGCCATGAGAGCCAAGCAGGCcaacaaacaagaaaacaacTGAGAACACAtgcataaacaaacacatagaaacacaataTTACAGTGATTTTTATGAAGATGCATAGTGTATCAGTCGTGCAGATCTGGCTTGACGGCGGGATTTAACCTACTTTCATTATTACTGTTTCAGGTTCTGAAGcactttatgaatgaaatgaagAAGTATTAAAATTCCTTACTTATAGCAACACCTCAAGAGATAAATTGAACAATTGTTTATTAATTATAAGATTGATTATAAGTTTCATCCCCAGATCTTTCTTTTAAAGTGTCCTTgtgcaagacactgaaccctgaaaTGTGTCCCACAATGATAAATCCAACGTTTATTAACTCAATTAATAACTTTTTTCTATAACCTTTCAGAAATGTTTAAGGAAATGatgaaatataaatgaaaatgatgAAATGGCCATTATAATTTCCCAAAGCCTAAGGTAttcaaatgtgttgttttgtctgaccaacaatcTAAAACTAAAAACTTAAAGCTATATTGTGTAAggatttctcccatctagcggtgaaattgtatatgacaaccaactgaatattactttctagcccttcctcctaCGGCGGCTGAACCCAAAATTAGctctctccatcgtttacacgcagctgttccagccactccaatattaactttggtcttgttgctttgcctgtcgcgttgttgttttaattgtctttttcgcttccctggcgagtaatctcccccttgcattcgtcacggtgccaataGGTGTACGAGGGTGAAATGCGGAGGtgtgtccctctttggctaatgtattttaaagatggaggctaCATGACTACCGTCATTCGGGCGAGTCGcttgtatgtattctgaatgattctgaatgtcagtTTCTAcacttacgagaatactttgattagttggtggtagtaattacacatgaatgagcacatatttgt
>XM_039801263.1
GTGAGTAGAGAGACTGGGAGGAGGCAGGCTGCGCTCATCAAAGGACCTCTCAGACTCTACAAGTTAATGACGGATGTAGCAGAGACCCTGAAGCCCTCAGACCCCGACAGCTACACGCAGACAGACGGACAGCCAGAAAGACAGACTGATATACAGcgagaaaaaaacaactgagtTTGAAATGACGTGGCGTGAGGAGCTACGTAGTAAGCAGTTCTGGCGCGCCATTCTTGCAGAGCTGCTTGGCACCCTGGTTTTAGTGAGCGCCGTGCTGGGTGCATCTGTGCCAGGCCCTGGAGAGGCCCCCACGGGACCCCTGTACCCAGCAGTGGCAGTGGGTGTGACGATTGTCGCACTGGGACACTGTTTTGGAGAAATAAGCGGGGCACAGGTGaaccctgcagtgactctggcTCTGTTGGCCACTCGGAAGCTGGAAGTGGTCAGAGCTGTTGTTTACATGGCTGCACAGTGTTTGGGGGCCTCTTTAGGAGCTGGGGCCCTCTACTTGGCCCTGCCAGTCAAAACCACTGCAGACCACTTTGTCAACAGGGTTCCTATAGAGTTAAATGCAGCCCAGGCTCTGGGCATGGAGGTTTTGTGCACCTTCCAGATGGTCTTCACTGTGTTCTCAGTAGAGGATCAGCGGCGGAGGGAAAGCCCAGAACCAGGAAACCTGGCCATTGGATTAGCACACACTGCTGGAGTGCTAATAGGGGGGCGGTTCTCTGGTGCTAGTATGAATCCCGCACGTTCTCTGGGTCCAGCCATCATCACTGGATTCTGGGAAAACCactggGTTTATTTGATCGGACCAGTGATCGGTGCTATACTGGCTGGAGTGTCCCATGAGTTCTTCTTTGCACAAAGCGCCTCTCGCCAGAAGCTGGTGGCTTGTCTGACCTGTAAGGACATAGAGATTGTGGAGACGACCAGCATGACGGGATCATCTCTGTCCACAGTCACACCAAACGCCATGAGAGCCAAGCAGGCcaacaaacaagaaaacaacTGAGAACACAtgcataaacaaacacatagaaacacaataTTACAGTGATTTTTATGAAGATGCATAGTGTATCAGTCGTGCAGATCTGGCTTGACGGCGGGATTTAACCTACTTTCATTATTACTGTTTCAGGTTCTGAAGcactttatgaatgaaatgaagAAGTATTAAAATTCCTTACTTATAGCAACACCTCAAGAGATAAATTGAACAATTGTTTATTAATTATAAGATTGATTATAAGTTTCATCCCCAGATCTTTCTTTTAAAGTGTCCTTgtgcaagacactgaaccctgaaaTGTGTCCCACAATGATAAATCCAACGTTTATTAACTCAATTAATAACTTTTTTCTATAACCTTTCAGAAATGTTTAAGGAAATGatgaaatataaatgaaaatgatgAAATGGCCATTATAATTTCCCAAAGCCTAAGGTAttcaaatgtgttgttttgtctgaccaacaatcTAAAACTAAAAACTTAAAGCTATATTGTGTAAggatttctcccatctagcggtgaaattgtatatgacaaccaactgaatattactttctagcccttcctcctaCGGCGGCTGAACCCAAAATTAGctctctccatcgtttacacgcagctgttccagccactccaatattaactttggtcttgttgctttgcctgtcgcgttgttgttttaattgtctttttcgcttccctggcgagtaatctcccccttgcattcgtcacggtgccaataGGTGTACGAGGGTGAAATGCGGAGGtgtgtccctctttggctaatgtattttaaagatggaggctaCATGACTACCGTCATTCGGGCGAGTCGcttgtatgtattctgaatgattctgaatgtcagtTTCTAcacttacgagaatactttgattagttggtggtagtaattacacatgaatgagcacatatttgt
>XM_039801264.1
GTGAGTAGAGAGACTGGGAGGAGGCAGGCTGCGCTCATCAAAGGACCTCTCAGACTCTACAAGTTAATGACGGATGTAGCAGAGACCCTGAAGCCCTCAGACCCCGACAGCTACACGCAGACAGACGGACAGCCAGAAAGACAGACTGATATACAGcgagaaaaaaacaactgagtTTGAAATGACGTGGCGTGAGCTACGTAGTAAGCAGTTCTGGCGCGCCATTCTTGCAGAGCTGCTTGGCACCCTGGTTTTAGTGAGCGCCGTGCTGGGTGCATCTGTGCCAGGCCCTGGAGAGGCCCCCACGGGACCCCTGTACCCAGCAGTGGCAGTGGGTGTGACGATTGTCGCACTGGGACACTGTTTTGGAGAAATAAGCGGGGCACAGGTGaaccctgcagtgactctggcTCTGTTGGCCACTCGGAAGCTGGAAGTGGTCAGAGCTGTTGTTTACATGGCTGCACAGTGTTTGGGGGCCTCTTTAGGAGCTGGGGCCCTCTACTTGGCCCTGCCAGTCAAAACCACTGCAGACCACTTTGTCAACAGGGTTCCTATAGAGTTAAATGCAGCCCAGGCTCTGGGCATGGAGGTTTTGTGCACCTTCCAGATGGTCTTCACTGTGTTCTCAGTAGAGGATCAGCGGCGGAGGGAAAGCCCAGAACCAGGAAACCTGGCCATTGGATTAGCACACACTGCTGGAGTGCTAATAGGGGGGCGGTTCTCTGGTGCTAGTATGAATCCCGCACGTTCTCTGGGTCCAGCCATCATCACTGGATTCTGGGAAAACCactggGTTTATTTGATCGGACCAGTGATCGGTGCTATACTGGCTGGAGTGTCCCATGAGTTCTTCTTTGCACAAAGCGCCTCTCGCCAGAAGCTGGTGGCTTGTCTGACCTGTAAGGACATAGAGATTGTGGAGACGACCAGCATGACGGGATCATCTCTGTCCACAGTCACACCAAACGCCATGAGAGCCAAGCAGGCcaacaaacaagaaaacaacTGAGAACACAtgcataaacaaacacatagaaacacaataTTACAGTGATTTTTATGAAGATGCATAGTGTATCAGTCGTGCAGATCTGGCTTGACGGCGGGATTTAACCTACTTTCATTATTACTGTTTCAGGTTCTGAAGcactttatgaatgaaatgaagAAGTATTAAAATTCCTTACTTATAGCAACACCTCAAGAGATAAATTGAACAATTGTTTATTAATTATAAGATTGATTATAAGTTTCATCCCCAGATCTTTCTTTTAAAGTGTCCTTgtgcaagacactgaaccctgaaaTGTGTCCCACAATGATAAATCCAACGTTTATTAACTCAATTAATAACTTTTTTCTATAACCTTTCAGAAATGTTTAAGGAAATGatgaaatataaatgaaaatgatgAAATGGCCATTATAATTTCCCAAAGCCTAAGGTAttcaaatgtgttgttttgtctgaccaacaatcTAAAACTAAAAACTTAAAGCTATATTGTGTAAggatttctcccatctagcggtgaaattgtatatgacaaccaactgaatattactttctagcccttcctcctaCGGCGGCTGAACCCAAAATTAGctctctccatcgtttacacgcagctgttccagccactccaatattaactttggtcttgttgctttgcctgtcgcgttgttgttttaattgtctttttcgcttccctggcgagtaatctcccccttgcattcgtcacggtgccaataGGTGTACGAGGGTGAAATGCGGAGGtgtgtccctctttggctaatgtattttaaagatggaggctaCATGACTACCGTCATTCGGGCGAGTCGcttgtatgtattctgaatgattctgaatgtcagtTTCTAcacttacgagaatactttgattagttggtggtagtaattacacatgaatgagcacatatttgt

Function

NR:

description
PREDICTED: aquaporin AQPAe.a-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801261.1 False 1869 mRNA 0.45 6 14892172 14898107
XM_039801263.1 True 1953 mRNA 0.46 6 14892057 14898107
XM_039801264.1 False 1950 mRNA 0.46 6 14892057 14898107

Neighbor

gene id symbol gene type direction distance location
baz2a baz2a,LOC102790184 coding upstream 3926 14868908 ~ 14888131 (+)
LOC120558671 ptges3,LOC102790477 coding upstream 25034 14862512 ~ 14867023 (+)
naca naca,LOC107737655,LOC106571941 coding upstream 38240 14845337 ~ 14853817 (+)
LOC120559926 NA coding upstream 38430 14853554 ~ 14853627 (+)
LOC120559927 NA coding upstream 39588 14852396 ~ 14852469 (+)
mipb mip,LOC100706349,LOC103373044,LOC102789611 coding downstream 2543 14900650 ~ 14902525 (+)
LOC120559459 NA coding downstream 114109 15012216 ~ 15032560 (+)
trnak-cuu NA coding downstream 114788 15012895 ~ 15012967 (+)
si:ch73-181d5.4 NA coding downstream 134600 15032707 ~ 15070413 (+)
LOC120559274 NA coding downstream 173814 15071921 ~ 15076945 (+)
G49778 LOC102302837,LOC101485799,LOC100702507,LOC103358639,LOC104919652,LOC103385584,LOC106524244 non-coding upstream 301281 14585449 ~ 14590776 (+)
G49775 LOC107731244 non-coding upstream 322460 14568325 ~ 14569597 (+)
G49764 NA non-coding upstream 340498 14551310 ~ 14551559 (+)
G49762 NA non-coding upstream 344962 14546864 ~ 14547095 (+)
G49761 NA non-coding upstream 345335 14545395 ~ 14546722 (+)
G49883 NA non-coding downstream 4809 14902916 ~ 14970803 (+)
LOC120559279 NA non-coding downstream 309635 15207742 ~ 15241127 (+)
G50002 NA non-coding downstream 378006 15276113 ~ 15276360 (+)
G50003 NA non-coding downstream 379339 15277446 ~ 15277646 (+)
G50014 NA non-coding downstream 524212 15422319 ~ 15422608 (+)
G49776 NA other upstream 314485 14574542 ~ 14577572 (+)
G49773 LOC103358639 other upstream 324601 14564867 ~ 14567456 (+)
uhrf1bp1 uhrf1bp1 other upstream 664169 14205597 ~ 14227888 (+)
hmga1a hmga1,LOC103355299 other upstream 771035 14113015 ~ 14121022 (+)
LOC120558697 LOC103355228,LOC101470284,LOC102288766,LOC101062828,LOC100700879,LOC102197182,LOC102790759 other upstream 1167067 13658732 ~ 13724990 (+)
zmp:0000000926 LOC104958731,LOC103370836,LOC104919619 other downstream 874110 15772217 ~ 15798957 (+)
G50045 tnnc1,LOC107391089,LOC103147776,LOC100708228,LOC108232086,LOC105932306,LOC102236084 other downstream 878110 15776217 ~ 15867369 (+)
slc6a1a iqsec1,LOC104940213,LOC107088165 other downstream 987883 15885990 ~ 15969331 (+)
LOC120559121 NA other downstream 1406205 16304312 ~ 16311017 (+)
LOC120559119 LOC104967193 other downstream 1424714 16322821 ~ 16379645 (+)

Expression


Co-expression Network