fbxw12 (fbxw12)


Basic Information

Item Value
gene id fbxw12
gene name fbxw12
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 16162697 ~ 16173601 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801419.1
GAGGATGTGTCTGCAGAGCTGGGGCTTCTGTAACCTTGCTGTTTTGGGGAGTGAACACGGGAATCACTCATGGAAGAGATACTACCTGCGACGTTGCCGTTTAGAGATGAAGATGACGGAAGGGAGGTCAGGAGGTTACACCTGCAAAAGCCTCAGAGGACACACAGGCAAGGTGGTGGGGTTGGTGTACCTGCAGGGGAATTCAGCTCAGCATCCTGACATCTGGAGCAGCAGTGCCACAGTGTGCAGCGCCTCTACTGATGGAACAGTCCGAGCATGGGACATCCAAAATggTGAACTCCTGTGGTGCAGTCCTGTGCAGAGTCCTTTGACAGTGATTGTAAGTGATGAAAAGCAAGACGTTGTGATCACAGCAGACTCCACAGGCCTCATCAAGACCTGGCAGGGTCAGACCGGCCAGGAGTTGGCCTCCTTTACTACTGCATCTCCACACTGTACAATACTACAGTACAATATCAACAACAATTGGTTTCTGACTGTTGGAACCAGTCAGGGATCTGTGTGTACACTAGCTGATCCAGCTTTGACTCAAAAGTCCAGTGTCATGGTGTGTGACACATTTAAAGTCAACACACTCCTAGTTTCACCTGACAAGAAATGGATCACTGCTGGAACCAAGGACAATGATGATTTAAGTCCAAAGGTGATTTACACTGAGAGTTTGAACTCACCGTCTGAGGGCGAAGATCCTCTGTGCCAATCTGTGCCGGTCTCCGGCTGCCAGGCTGCTGTCTTCATACCCACCCAGCCTGCCAGACTGGCCATCATCCACCATAACCAGCGCCCAAACAACAAAGCCCTCACTGTCTTCGATGTCAGCATTAAAAAAACTAAGTACAAGTCAGAGATCCAGGTCCAGCAGGTGGAGTCCTTCCCCTTGACATTGAACACCAGTTCCTCACACATCCTTCTCGAGGCCAAGGACAGCAACTGCTTAGTGTTGGCAGCTGGTCAGGAGCTATGGGTCTACTCTTTGAAAGGAGCCCTGCTTGCTAGCTTTAAAGATCATACTATGCCTATTTCTTCTATATCTGTGGACAGCTTTCGTGTGGTGACAGCATCTCAGGACCTCTCCTTACGAGTGTTGACATGGAGAAATGACAGAGACCAGAGGTTGACCCTGGAGAGCCGATACCACTTACTGGGAGGCTCTCACACAATGTCCAGAGGGTTCACCCATGTTGCTTGTGACTACTCCAGCATCGTGGCCTCAGCAGAAGGGATGGACGGGAAAGATGTCTTAAAAGCGTATTCTTTCACCTCATGAGCGTCGCTGCTCCAAAAAAAGCTCTGTGGAAAGTCAATCCTGTGGCCTCACTTGACTTGATTCGTCTCGGATTATCCCTGTTTAGCGGATGTGGCAACACAAGAAACCCACAGGATCCTGTGCGCTCCTGTGTGGAATGCCACCTATCTCAACAGGATGACAGATCAAGCATGTGAATAAATTAACCTCAAGAATGTGTTGAAAAGTAGCAGAGATCGTGTGCTTTGTAATTATCTCCATGAAGAGGTTCCTCTGGTCTGCAGCTCTGGGGTCGGGGGGGGTTCGTTGTTGGGCTATTCTTGACTCCTCTTGGATTAGACTAATCTTATTACAGTACAGGTATGAAAGTAGAGCACCCACTCCTCAACAAAAACTCATATTAAAGCCACATCACTATTGCCTTCTGCTGGACTGTTGAGATACGATGATCCACAATATATTCTAGTCTATTCTATATTATAGTCTGTTAATGCACATATTGTCATTAGGAAAGACCTGTCCAACTGTCCACTTGACCAGATTCTCAACGTGTCTAATATGTATTTGATTAATGACATGCATGTCTATTGTTGTGAATACATTTAAACCAATTTTG
>XM_039801420.1
TCTCTTGTCCCTTTATTCTTTCCGTAGCAACCCCAAATGTAGCTTTTCCTTTGACGTACAGTTGGCGAGGAGCTGCAATATTATTGATGTCAGTATGGATCTTCATCCCCAGCACTTGATCGGTGATTGCCTTATTCATATTTTTACATTCTTGCCCGAGGAAGATTTAATAAGTGCCTCCTGTGTGTGTAAGGTAAGTGTCCAACTTGCGGAAGTAGCTGTGCAATACAGGAGGATGTGTCTGCAGAGCTGGGGCTTCTGTAACCTTGCTGTTTTGGGGAGTGAACACGGGAATCACTCATGGAAGAGATACTACCTGCGACGTTGCCGTTTAGAGATGAAGATGACGGAAGGGAGGTCAGGAGGTTACACCTGCAAAAGCCTCAGAGGACACACAGGCAAGGTGGTGGGGTTGGTGTACCTGCAGGGGAATTCAGCTCAGCATCCTGACATCTGGAGCAGCAGTGCCACAGTGTGCAGCGCCTCTACTGATGGAACAGTCCGAGCATGGGACATCCAAAATggTGAACTCCTGTGGTGCAGTCCTGTGCAGAGTCCTTTGACAGTGATTGTAAGTGATGAAAAGCAAGACGTTGTGATCACAGCAGACTCCACAGGCCTCATCAAGACCTGGCAGGGTCAGACCGGCCAGGAGTTGGCCTCCTTTACTACTGCATCTCCACACTGTACAATACTACAGTACAATATCAACAACAATTGGTTTCTGACTGTTGGAACCAGTCAGGGATCTGTGTGTACACTAGCTGATCCAGCTTTGACTCAAAAGTCCAGTGTCATGGTGTGTGACACATTTAAAGTCAACACACTCCTAGTTTCACCTGACAAGAAATGGATCACTGCTGGAACCAAGGACAATGATGATTTAAGTCCAAAGGTGATTTACACTGAGAGTTTGAACTCACCGTCTGAGGGCGAAGATCCTCTGTGCCAATCTGTGCCGGTCTCCGGCTGCCAGGCTGCTGTCTTCATACCCACCCAGCCTGCCAGACTGGCCATCATCCACCATAACCAGCGCCCAAACAACAAAGCCCTCACTGTCTTCGATGTCAGCATTAAAAAAACTAAGTACAAGTCAGAGATCCAGGTCCAGCAGGTGGAGTCCTTCCCCTTGACATTGAACACCAGTTCCTCACACATCCTTCTCGAGGCCAAGGACAGCAACTGCTTAGTGTTGGCAGCTGGTCAGGAGCTATGGGTCTACTCTTTGAAAGGAGCCCTGCTTGCTAGCTTTAAAGATCATACTATGCCTATTTCTTCTATATCTGTGGACAGCTTTCGTGTGGTGACAGCATCTCAGGACCTCTCCTTACGAGTGTTGACATGGAGAAATGACAGAGACCAGAGGTTGACCCTGGAGAGCCGATACCACTTACTGGGAGGCTCTCACACAATGTCCAGAGGGTTCACCCATGTTGCTTGTGACTACTCCAGCATCGTGGCCTCAGCAGAAGGGATGGACGGGAAAGATGTCTTAAAAGCGTATTCTTTCACCTCATGAGCGTCGCTGCTCCAAAAAAAGGTGCCTACAAAGAGTGTGCACAACCCTCCAGAAGGAGGACTATTTGCTTTAATTATGAACTTGTcatcatatactgtatgcagaCATTAGGATGGGAAGTCTATGTTTACACAAACCAGAATATAACATTTATTACAGATGAGAAATCCTCCGTTGATACACTGTGTGATAAACGTGCTTGTTAAGAAAAAATAAGTTTGTAAAGGTGTAAGGATAATGTTCATTGACTACACTTTTGGAGCTGAGGTATGTCACTGTTGAATATGACCAGTCTTAAGGCATAATGTTTACTAAATATTCTTTCGTCA

Function

symbol description
fbxw12 Predicted to be located in cytosol.

NR:

description
F-box/WD repeat-containing protein 12

GO: NA

KEGG:

id description
K10267 FBXW12S; F-box and WD-40 domain protein 12/13/14/15/16/17/19

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801419.1 True 1883 mRNA 0.47 9 16163048 16173601
XM_039801420.1 False 1848 mRNA 0.47 9 16162697 16166596

Neighbor

gene id symbol gene type direction distance location
LOC120559808 NA coding upstream 25884 16135340 ~ 16136813 (+)
LOC120559610 fbln2 coding upstream 35621 16103359 ~ 16127076 (+)
LOC120559633 LOC102199705,LOC100709941 coding upstream 201694 15957583 ~ 15961003 (+)
cnbpa cnbp,LOC100709667,LOC101470196 coding upstream 206023 15952502 ~ 15956674 (+)
syn2a LOC103368776,LOC108232134,LOC102310081,LOC100708766,LOC102780991,LOC102197631,LOC101471639 coding upstream 228472 15922374 ~ 15934225 (+)
LOC120558327 LOC103361995,LOC104966709 coding downstream 2976 16176577 ~ 16220258 (+)
fgd fgd3,LOC104966710 coding downstream 51951 16225552 ~ 16283799 (+)
LOC120559120 NA coding downstream 124330 16297931 ~ 16304967 (+)
wu:fl23c11 NA coding downstream 235680 16409281 ~ 16418412 (+)
LOC120558716 creld1,LOC102797660,LOC103361984,LOC100691430 coding downstream 245234 16418835 ~ 16424181 (+)
G50077 NA non-coding upstream 211525 15949249 ~ 15951172 (+)
G50029 NA non-coding upstream 457229 15705096 ~ 15705468 (+)
G50017 NA non-coding upstream 493153 15667249 ~ 15669544 (+)
G50011 NA non-coding upstream 523396 15637483 ~ 15639301 (+)
G50014 NA non-coding upstream 740089 15422319 ~ 15422608 (+)
G50218 NA non-coding downstream 111956 16285557 ~ 16285759 (+)
G50280 NA non-coding downstream 252017 16425618 ~ 16425820 (+)
LOC120558722 NA non-coding downstream 370668 16544269 ~ 16545835 (+)
G50318 NA non-coding downstream 393400 16567001 ~ 16569382 (+)
G50320 NA non-coding downstream 406458 16580059 ~ 16580993 (+)
slc6a1a iqsec1,LOC104940213,LOC107088165 other upstream 193366 15885990 ~ 15969331 (+)
G50045 tnnc1,LOC107391089,LOC103147776,LOC100708228,LOC108232086,LOC105932306,LOC102236084 other upstream 295328 15776217 ~ 15867369 (+)
zmp:0000000926 LOC104958731,LOC103370836,LOC104919619 other upstream 363740 15772217 ~ 15798957 (+)
G49776 NA other upstream 1585125 14574542 ~ 14577572 (+)
G49773 LOC103358639 other upstream 1595241 14564867 ~ 14567456 (+)
LOC120559121 NA other downstream 130711 16304312 ~ 16311017 (+)
LOC120559119 LOC104967193 other downstream 149220 16322821 ~ 16379645 (+)
brpf1 brpf1 other downstream 206443 16380044 ~ 16396208 (+)
LOC120559923 NA other downstream 224068 16397669 ~ 16408461 (+)
eif2d eif2d other downstream 804296 16977897 ~ 16994701 (+)

Expression


Co-expression Network