LOC120559633 (LOC102199705,LOC100709941)


Basic Information

Item Value
gene id LOC120559633
gene name LOC102199705,LOC100709941
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 15957583 ~ 15961003 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801508.1
AAATTCTAGACGAGAAAACCTacgacgaaaaaaaaaaaaaaaataagctcaTCAGCCAGCGCGGCCGGACCGAGCCGGCTCTCGCTTCGTGCCGGGTCGTTTTGATTGatattgtttttctcttttttaaaccCGGCGATAAACAAAAGAGATGAGGGGACTCCTGCCGTTTTACCGGGGCCTGTGCACCCTGAGTAACCGTCAAGCCAGACGAAAAGCTGGGATTGTCGGTTCTCGGTGCGGGTTTTGCGGAACTCAGTCTAATAGCAAGCCGCAGCCAAGCTTTGGGCTGTTGTTTGACATTGATGGCGTGCTTGTCCGGGGAAGGATGCCAATCCCTGCTGCAAAGAAGGCGTTTGAGAAGTTGGTCGACTCTCAGGGACAATTTGTGTTGCCAGTTGTGTTTGTCACAAATGCAGGGAATTGCCTCCGACAAACAAAAGCAGACCAGCTCTCTCACATCCTGGGAGTACCTATTACACAAGATCAAGTCATCATGTCCCACAGTCCCCTGAGGATGTTTAATAAGTTTCATGACAAGTGTGTGCTGGTGTCAGGACAGGGACCAGTCCTGGAAATTGCTACAAACGTGGGCTTTACGAATGTTGTAAGTGTTGATATGCTGAGGGAATCATTCCCATTGCTGGACATGGTGGATCACAACAGGAGACCCAAATTGCCGTCCAATCCTGTTCGCAACCTTCCTAAGATTGATGCCGTGGTTCTGTTCGGGGAGCCAATTCGATGGGAGACCAACCTCCAGCTGATAATTGACATCTTGTTGACCAAAGGGAACCTCAGCAGTGTTCACCAAACCCAAAACATGCCTCAACTCCCCCTGCTGGCCTGCAACATGGACCTCATGTGGATGGCTGAGGCACATTCTCCACGGTTTGGCCATGGGACATTTCTTGTTTGCCTAGAGAACATCTATAAGAAGATAACCGGTAAAGACCTGAAGTATGAGGCGCTCATGGGAAAACCGAGTGAGCTGACCTACCATTTTGCAGAGTACCTCATCAGAACCCAGGCCATGCAGATGCAATGGAAACTTCCCGTCACTTCCCTTTATGCTATAGGGGATAACATTATGACTGACATCTATGGCGCCAATCTATACAACCGCTACCTGGAGCAGAGAGTTTCTCGAAAGAACCCCAAAACTGTTGCTAAGATGGTTTCCGCCACAGGGTCCACCACTGCAGTGCcccaggaggaggagagggacaatCTGTGGGAGAGCGAGCTAGCGCTGCCCTCTGCCACTTCCTGTAAGTCTGTCCTAGTTTGCACAGGGGTGTACAACCCCAACGTAGAAGTGCCGTCGGATGCAAGTCACTGCATCAAAGAGACTGTGTTCCACGGCCACCGGGACTTCAGATTTGACCCTGCGCTGGTGGAGCCAGACCACATTGTGCAGGATGTGGCAGAAGCTGTAGACCGCATCTTTGAGCTGGAGAAGTTTGTGCCTCAGTAG

Function

NR:

description
PREDICTED: cat eye syndrome critical region protein 5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801508.1 True 1477 mRNA 0.50 8 15957583 15961003

Neighbor

gene id symbol gene type direction distance location
cnbpa cnbp,LOC100709667,LOC101470196 coding upstream 909 15952502 ~ 15956674 (+)
syn2a LOC103368776,LOC108232134,LOC102310081,LOC100708766,LOC102780991,LOC102197631,LOC101471639 coding upstream 23358 15922374 ~ 15934225 (+)
LOC120559823 LOC103368780,LOC104958736,LOC100707957 coding upstream 102540 15850652 ~ 15855043 (+)
LOC120558427 LOC104958737 coding upstream 109788 15841943 ~ 15847795 (+)
spo11 spo11,LOC103368783 coding upstream 116806 15833183 ~ 15840777 (+)
LOC120559610 fbln2 coding downstream 142356 16103359 ~ 16127076 (+)
LOC120559808 NA coding downstream 174337 16135340 ~ 16136813 (+)
fbxw12 fbxw12 coding downstream 201694 16162697 ~ 16173601 (+)
LOC120558327 LOC103361995,LOC104966709 coding downstream 215574 16176577 ~ 16220258 (+)
fgd fgd3,LOC104966710 coding downstream 264549 16225552 ~ 16283799 (+)
G50077 NA non-coding upstream 6411 15949249 ~ 15951172 (+)
G50029 NA non-coding upstream 252115 15705096 ~ 15705468 (+)
G50017 NA non-coding upstream 288039 15667249 ~ 15669544 (+)
G50011 NA non-coding upstream 318282 15637483 ~ 15639301 (+)
G50014 NA non-coding upstream 534975 15422319 ~ 15422608 (+)
G50218 NA non-coding downstream 324554 16285557 ~ 16285759 (+)
G50280 NA non-coding downstream 464615 16425618 ~ 16425820 (+)
LOC120558722 NA non-coding downstream 583266 16544269 ~ 16545835 (+)
G50318 NA non-coding downstream 605998 16567001 ~ 16569382 (+)
G50320 NA non-coding downstream 619056 16580059 ~ 16580993 (+)
G50045 tnnc1,LOC107391089,LOC103147776,LOC100708228,LOC108232086,LOC105932306,LOC102236084 other upstream 90214 15776217 ~ 15867369 (+)
zmp:0000000926 LOC104958731,LOC103370836,LOC104919619 other upstream 158626 15772217 ~ 15798957 (+)
G49776 NA other upstream 1380011 14574542 ~ 14577572 (+)
G49773 LOC103358639 other upstream 1390127 14564867 ~ 14567456 (+)
uhrf1bp1 uhrf1bp1 other upstream 1729695 14205597 ~ 14227888 (+)
LOC120559121 NA other downstream 343309 16304312 ~ 16311017 (+)
LOC120559119 LOC104967193 other downstream 361818 16322821 ~ 16379645 (+)
brpf1 brpf1 other downstream 419041 16380044 ~ 16396208 (+)
LOC120559923 NA other downstream 436666 16397669 ~ 16408461 (+)
eif2d eif2d other downstream 1016894 16977897 ~ 16994701 (+)

Expression


Co-expression Network