cacnb3b (LOC103363728,LOC104967530,LOC100705687,LOC101472360)


Basic Information

Item Value
gene id cacnb3b
gene name LOC103363728,LOC104967530,LOC100705687,LOC101472360
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 22184296 ~ 22199110 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801597.1
TGTCTGCCTCCGACTCTAGCGCTACAGGACTCATCTGTAACAAGGACGAGGACTGTTTTGTCCCACATCACACTGGAAGCATGTTGAAGtatgaacaggaggaatgatCACAGCAAACACAAAGTGTTTCAATGTCCATATGGGCATGGTTCAGCCGATTCCTACACTAGTCGACCTTCGGATTCCGACCTGTCCCTGGAGGAGGACCAGGAGGCGTCTCGGCGTGAAGCCGAGCGCCAGGCTCAGCTGCAGCTAGAGAGAGCCAAGTCCAAACCAGTAGCATTTGCAGTGAAAACCAATGTGAGTTACTGTGGGGCTCTTGATGAAGATTGTCCAGTCCAAGGTGCTGCTATTAACTTCGAAACCAAAGACTTCCTGCACATAAAAGAGAAATACAACAATGATTGGTGGATTGGTCGACTAGTGAAAGAAGGGGCGGACATCACATTCATCCCGAGCCCAGTCAAACTGGAAGCCATGAGGATAAAACAAGAGCAGAAAGCAGCAGCAAGGAAAGGAGGGAACGCTTCATCTGGAGGCTGGAGGTCCACCCCGCCATCTGCAGCCAAACAGAAGCAGAAACAGACTGAGCATGTTCCTCCATATGATGTGGTCCCTTCTATGCGGCCAGTGGTGCTGGTGGGCCCTTCGCTGAAAGGCTATGAGGTAACAGACATGATGCAGAAAGCCTTGTTTGACTTCCTAAAGCACAGATTTGATGGCAGGATCTCTATTACACGGGTGACTGCTGATTTGTCACTGGCGAAGCGCTCAGTGCTGAACAAGAAGGCCATAATGGAGAGATCCAACACACGCTCCAGTCTGGctgaggtccagagtGAGATCGAGAGGATCTTTGAGCTGGCCAAGTCCCTCCAGCTGGTCGTCCTGGACGCAGACACCATCAATCACCCAGCACAGCTCCTTAAAACCTCTCTGGCTCCCATCGTCGTATACGTCAAAGTCTCCTCGCCTAAAGTCCTTCAGAGGCTGATTAAATCACGAGGGAAGTCACAAAGCAAACACCTCAATGTCCAAATGATGGCAGGAGACAAGCTAGCACAGTGTCCACCTGAGATGTTTGATGTCATCCTGGATGAGAATCAGCTGGAGGATGCATGTGAACATCTTGCAGAGTACCTGGACATTTACTGGCGTGCTACGCATCTCCCCTGTTCTGCCCCTGTTAACCCCTTACTGGACCAAAGCGTGGTCACCCCACCCTCAGCTGACTCCAGCCAGCAGTTTTCTGAGACTCAAGAGTTGATAGAATGATCACTACCACAGACATAGGACGCCTGTGCTGTCGGCTGGGGTCAGACTAGGAGGGCATAGAGCACAGGGACCAGGGCGCCACCAGGGGGCAGCAGCAGCCCTTATCTCTCCAAAGCCAGCCACCACCTTCTCTGGTCAGGTCCAGAGTCCCtcaggagagaaagagcagGAGGCTGGTGAGCTGGAGGATGAGGAGACACAAAACCAGGGAGAGGAGCATGAAGAGAAGGAGGATTCGAGAGAGGAGCCTCTCCACCTCACTGCTGCCCCCTCGGGAAGAGCTCCCTGCTCCCACCGCCACGTGACAACTCAGGGCCGCTTTCTACAGCTGCACGCCTACTGCTAACAAAAACCAGTACAGCAGTGCCGTCACTGCACGCCACCTCGCCACACCCTTCCTCCCACCCTGACCTTAATCCCAACTACCTGCTTTCACACTGGAAGTCACATCCCCCACCTGGCAACGCTGAGCCAGCCCATGTGTGATCAGACCCCCAGAAGTGGCTATCCCAGACACACATAGGCTAATTCAGCTCTCAATGTCGAGAAATTACACACCTCCGAAGGTAGAGTATGTTAGCATACAGAATTGTAGCATAGCAACGCTATCAGTATAACACAAAATCAAAACATGAGTAGCTTTCCATTGTCGGttcccagtgtttcctctctgATAAACCTGTCTTCCCCCTCTGGCCAAAGAGTGCAGATAGTGACAGAAAACCAAGTGTGTATGtcctccatctctacagctctcTGTGAGCTGGCATTCCACTTTAACTAAATGTTTCCTCAAAGGCACAATTGTTTCTAGCAGAGTCAACATCATCTCAACTGTGTTGGGACACCCAAGGAAAACTTTCCTCTTCctttatcacttattttctcTTCTTGTTTATCCAGTagcctttttttaattattctttatttccaattatttttttacagtatatatactacTATCTATAATTCATATATTGTCTCTCAGTATAGCTGATCACATAAGTAcgcaacagtgatgcaaaactAGCATGACAAGCACAGACTTGCACATCAACAGTCTATATGCATCTTTTGTCAcagctgtgaatgtataaatgcTGGTCCATTGTCTTAGGAAGGATTATTTACAATAATTGTGGTTTGTTTGCAGATGGTTGGTAGCAAATCCCATAACCTAACTAAAATGAAGAAAACTATTTATCCAAAAGAAATAAATGGTAAAATATTATTTCTGACAAAATTTGACAAACTCTGAGATATCATTTGTAGCATAACCAGATATCAGGAGATTCACTGATATTTCACATATGTGTAGGTTACTCCAAAAAGGACAGATGCATTGCTCCAGTGTCAGGCTTCATGACTCCTTTATTGGAGAAATCATACTCTTATAACCAGATGttgtaaattatgtttttaaaaatcgATAATTAACATTGTCTGTTTAtagtatttttatttctttgtttaaaaggagaaaaaaaaaagataaattgtGAGAGATTGAACACAACGTGACTTGGTATTTTCCAATGGactgtaaaacataaaaaaacaccttATTGAGTCGATGTACTGTATGATTTCCAAATACAGTAGATGTATTTATTAATAACACAGTTAAATGTTGCCTCAGCATGTGTGCTGAATGTAAGTTTTGGTGATATTAGCGCTAAAATAAACACAGCACCACAAATTACACAGTCAAGAACatactgcatttttttttatttgaccacATCACTTGTATCATTTACATCTCACACTTAGTGGTGTAGTGGTAACTGAAGAAGTGCTGGACTATATAGACATCAATGGAGCTTCAGAATTATTATCTCATAATCGTTTGGCATTAACAGCTAAAATAAGCATGTGTACAGCAGGCCTATAAGTATACAAAGGGCGACTTCTGGTGGTATGGTTATGTTATTCTTATATCCATATGGGAATATGTACAACTTCCAGTCATAACACTAGTTAAATGTCTTTTCTACAAATAACAAAAGCTTCATTCAAACGTTAACATAGCCACCAACTGTCACTTTTGTGTTTATCATCTATTGGCCTCCATTTCATATCTTACAGTATAAATGAATGCATCTCAATAATTCACTGAGGTTCTTTACATTAATGCATCTGCTTTTAACATATAAAACTATAGAATTCAGCTAACATACCactaatgtaaataatcaaatgTATGTGCATGACATATGTATTCCTGTTTCATCAGAAGGGCTTTTTAGGACCATCCTTACATGAGCCATTCATTCTTCATTGTAAATCAACATGAGCTGCATAACAAGTCACATGTATCAAGGCTTAATTGTACATGCTGTATattcaatattattattattatgaaattGCACAGAACAACAAATGCAGACAGGTAGAATGGTTTTAGTGACAGTACACAATTCTATACTCAACGCCTCTGAAAGCATGTGTTGATACgtattttcctctctttttagAATGATGCACAGTTATTTAGGACCACCGTAAAGTTTGCTTCCACTGACACCCACATTCATTTCTGAAGGACCAGGTTTGAGATATATAACTTCTACTTGATGAAACACAGAGAGCACATTACCTtcttttgattaaaaaaaaagatattagcTCCTTCTATTTGCTTAAATTGTATTGCAGGACATTTCTACGAAAGGTGAATTATTCTTTGGACTTCCAAAGCACAATTTTTTACAATTATCATTTCCTATTGCGTTTCACTTGCCTAAATTCTGTATGCAATACAAAGTCTAACATTGACGAGACACTAGCTGAGACTATCAAGGTACAGTATCTCCTCAGTTATGATGGGGTATAATTGCACTACTATCATTTATATGTCTGCTTTACAATGCAATAAATGCACTAAACGTTATGCTGTACCCACCTCCAATCCTGAACAAGTTATCTGGTCTGATGATGATGTCAACATTTCACTTGGTTTCTGACAAGTCGGCAAGATAAATTATATCCAACAGTGTCTGATGATGATGTGTACAGGGTGCATCTTTTGTCTATAGCACATTTGAAAGAGGGGGtgaataaaacacaacaacatttaaataca
>XM_039801598.1
AGAAAAGCTCCTTTTCTTACATGTGGGCTGGCTCGAAGAAACCCACTGTACTGTACCAGTATACATGGGCATGTACACACCAGTGCTGCAGTCAGGGCATCAATTTTGTATAGGAAATGGCTGTTGAGGCAGCGCAGCAACGTCAGCTGTAAAGCACTTAGGCTGAGcgtgcctccctctctctccccactgTAACCACGGGCTGAGAGGAGGAGGGTTCCGCCTTTTCTGTGCAATGGGGGAGAAGAAAGCGCTTGCAGCAGAATCATGTCTGCCTCCGACTCTAGCGCTACAGGACTCATCTGTAACAAGGGTTCAGCCGATTCCTACACTAGTCGACCTTCGGATTCCGACCTGTCCCTGGAGGAGGACCAGGAGGCGTCTCGGCGTGAAGCCGAGCGCCAGGCTCAGCTGCAGCTAGAGAGAGCCAAGTCCAAACCAGTAGCATTTGCAGTGAAAACCAATGTGAGTTACTGTGGGGCTCTTGATGAAGATTGTCCAGTCCAAGGTGCTGCTATTAACTTCGAAACCAAAGACTTCCTGCACATAAAAGAGAAATACAACAATGATTGGTGGATTGGTCGACTAGTGAAAGAAGGGGCGGACATCACATTCATCCCGAGCCCAGTCAAACTGGAAGCCATGAGGATAAAACAAGAGCAGAAAGCAGCAGCAAGGAAAGGAGGGAACGCTTCATCTGGAGGCTGGAGGTCCACCCCGCCATCTGCAGCCAAACAGAAGCAGAAACAGACTGAGCATGTTCCTCCATATGATGTGGTCCCTTCTATGCGGCCAGTGGTGCTGGTGGGCCCTTCGCTGAAAGGCTATGAGGTAACAGACATGATGCAGAAAGCCTTGTTTGACTTCCTAAAGCACAGATTTGATGGCAGGATCTCTATTACACGGGTGACTGCTGATTTGTCACTGGCGAAGCGCTCAGTGCTGAACAAGAAGGCCATAATGGAGAGATCCAACACACGCTCCAGTCTGGctgaggtccagagtGAGATCGAGAGGATCTTTGAGCTGGCCAAGTCCCTCCAGCTGGTCGTCCTGGACGCAGACACCATCAATCACCCAGCACAGCTCCTTAAAACCTCTCTGGCTCCCATCGTCGTATACGTCAAAGTCTCCTCGCCTAAAGTCCTTCAGAGGCTGATTAAATCACGAGGGAAGTCACAAAGCAAACACCTCAATGTCCAAATGATGGCAGGAGACAAGCTAGCACAGTGTCCACCTGAGATGTTTGATGTCATCCTGGATGAGAATCAGCTGGAGGATGCATGTGAACATCTTGCAGAGTACCTGGACATTTACTGGCGTGCTACGCATCTCCCCTGTTCTGCCCCTGTTAACCCCTTACTGGACCAAAGCGTGGTCACCCCACCCTCAGCTGACTCCAGCCAGCAGTTTTCTGAGACTCAAGAGTTGATAGAATGATCACTACCACAGACATAGGACGCCTGTGCTGTCGGCTGGGGTCAGACTAGGAGGGCATAGAGCACAGGGACCAGGGCGCCACCAGGGGGCAGCAGCAGCCCTTATCTCTCCAAAGCCAGCCACCACCTTCTCTGGTCAGGTCCAGAGTCCCtcaggagagaaagagcagGAGGCTGGTGAGCTGGAGGATGAGGAGACACAAAACCAGGGAGAGGAGCATGAAGAGAAGGAGGATTCGAGAGAGGAGCCTCTCCACCTCACTGCTGCCCCCTCGGGAAGAGCTCCCTGCTCCCACCGCCACGTGACAACTCAGGGCCGCTTTCTACAGCTGCACGCCTACTGCTAACAAAAACCAGTACAGCAGTGCCGTCACTGCACGCCACCTCGCCACACCCTTCCTCCCACCCTGACCTTAATCCCAACTACCTGCTTTCACACTGGAAGTCACATCCCCCACCTGGCAACGCTGAGCCAGCCCATGTGTGATCAGACCCCCAGAAGTGGCTATCCCAGACACACATAGGCTAATTCAGCTCTCAATGTCGAGAAATTACACACCTCCGAAGGTAGAGTATGTTAGCATACAGAATTGTAGCATAGCAACGCTATCAGTATAACACAAAATCAAAACATGAGTAGCTTTCCATTGTCGGttcccagtgtttcctctctgATAAACCTGTCTTCCCCCTCTGGCCAAAGAGTGCAGATAGTGACAGAAAACCAAGTGTGTATGtcctccatctctacagctctcTGTGAGCTGGCATTCCACTTTAACTAAATGTTTCCTCAAAGGCACAATTGTTTCTAGCAGAGTCAACATCATCTCAACTGTGTTGGGACACCCAAGGAAAACTTTCCTCTTCctttatcacttattttctcTTCTTGTTTATCCAGTagcctttttttaattattctttatttccaattatttttttacagtatatatactacTATCTATAATTCATATATTGTCTCTCAGTATAGCTGATCACATAAGTAcgcaacagtgatgcaaaactAGCATGACAAGCACAGACTTGCACATCAACAGTCTATATGCATCTTTTGTCAcagctgtgaatgtataaatgcTGGTCCATTGTCTTAGGAAGGATTATTTACAATAATTGTGGTTTGTTTGCAGATGGTTGGTAGCAAATCCCATAACCTAACTAAAATGAAGAAAACTATTTATCCAAAAGAAATAAATGGTAAAATATTATTTCTGACAAAATTTGACAAACTCTGAGATATCATTTGTAGCATAACCAGATATCAGGAGATTCACTGATATTTCACATATGTGTAGGTTACTCCAAAAAGGACAGATGCATTGCTCCAGTGTCAGGCTTCATGACTCCTTTATTGGAGAAATCATACTCTTATAACCAGATGttgtaaattatgtttttaaaaatcgATAATTAACATTGTCTGTTTAtagtatttttatttctttgtttaaaaggagaaaaaaaaaagataaattgtGAGAGATTGAACACAACGTGACTTGGTATTTTCCAATGGactgtaaaacataaaaaaacaccttATTGAGTCGATGTACTGTATGATTTCCAAATACAGTAGATGTATTTATTAATAACACAGTTAAATGTTGCCTCAGCATGTGTGCTGAATGTAAGTTTTGGTGATATTAGCGCTAAAATAAACACAGCACCACAAATTACACAGTCAAGAACatactgcatttttttttatttgaccacATCACTTGTATCATTTACATCTCACACTTAGTGGTGTAGTGGTAACTGAAGAAGTGCTGGACTATATAGACATCAATGGAGCTTCAGAATTATTATCTCATAATCGTTTGGCATTAACAGCTAAAATAAGCATGTGTACAGCAGGCCTATAAGTATACAAAGGGCGACTTCTGGTGGTATGGTTATGTTATTCTTATATCCATATGGGAATATGTACAACTTCCAGTCATAACACTAGTTAAATGTCTTTTCTACAAATAACAAAAGCTTCATTCAAACGTTAACATAGCCACCAACTGTCACTTTTGTGTTTATCATCTATTGGCCTCCATTTCATATCTTACAGTATAAATGAATGCATCTCAATAATTCACTGAGGTTCTTTACATTAATGCATCTGCTTTTAACATATAAAACTATAGAATTCAGCTAACATACCactaatgtaaataatcaaatgTATGTGCATGACATATGTATTCCTGTTTCATCAGAAGGGCTTTTTAGGACCATCCTTACATGAGCCATTCATTCTTCATTGTAAATCAACATGAGCTGCATAACAAGTCACATGTATCAAGGCTTAATTGTACATGCTGTATattcaatattattattattatgaaattGCACAGAACAACAAATGCAGACAGGTAGAATGGTTTTAGTGACAGTACACAATTCTATACTCAACGCCTCTGAAAGCATGTGTTGATACgtattttcctctctttttagAATGATGCACAGTTATTTAGGACCACCGTAAAGTTTGCTTCCACTGACACCCACATTCATTTCTGAAGGACCAGGTTTGAGATATATAACTTCTACTTGATGAAACACAGAGAGCACATTACCTtcttttgattaaaaaaaaagatattagcTCCTTCTATTTGCTTAAATTGTATTGCAGGACATTTCTACGAAAGGTGAATTATTCTTTGGACTTCCAAAGCACAATTTTTTACAATTATCATTTCCTATTGCGTTTCACTTGCCTAAATTCTGTATGCAATACAAAGTCTAACATTGACGAGACACTAGCTGAGACTATCAAGGTACAGTATCTCCTCAGTTATGATGGGGTATAATTGCACTACTATCATTTATATGTCTGCTTTACAATGCAATAAATGCACTAAACGTTATGCTGTACCCACCTCCAATCCTGAACAAGTTATCTGGTCTGATGATGATGTCAACATTTCACTTGGTTTCTGACAAGTCGGCAAGATAAATTATATCCAACAGTGTCTGATGATGATGTGTACAGGGTGCATCTTTTGTCTATAGCACATTTGAAAGAGGGGGtgaataaaacacaacaacatttaaataca

Function

NR:

description
PREDICTED: voltage-dependent L-type calcium channel subunit beta-4-like

GO:

id name namespace
GO:0034765 regulation of ion transmembrane transport biological_process
GO:0070588 calcium ion transmembrane transport biological_process
GO:0005891 voltage-gated calcium channel complex cellular_component
GO:0005245 voltage-gated calcium channel activity molecular_function

KEGG:

id description
K04863 CACNB2; voltage-dependent calcium channel beta-2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801597.1 False 4363 mRNA 0.42 15 22184564 22199110
XM_039801598.1 True 4528 mRNA 0.43 14 22184296 22199110

Neighbor

gene id symbol gene type direction distance location
zgc:158263 LOC104932850,LOC104967525,LOC101474144,LOC102796628 coding upstream 64687 22110987 ~ 22119609 (+)
idh3g idh3g coding upstream 156002 22022834 ~ 22028294 (+)
ribc1 NA coding upstream 356406 21823518 ~ 21827890 (+)
tmem9 tmem9,LOC107707676,LOC106572715,LOC107669678 coding upstream 403346 21776471 ~ 21780950 (+)
zgc:153867 LOC107390870,LOC103467339,LOC102296328,LOC104956861,LOC105928965,LOC106950810,LOC106525009,LOC101167617,LOC102221965,LOC100708807,LOC101480989 coding upstream 437579 21737480 ~ 21746717 (+)
rnd1b LOC101472065,LOC103358261,LOC100705424,LOC104932892,LOC103384592 coding downstream 3981 22203091 ~ 22213864 (+)
ptges3a LOC107390842,LOC103368333,LOC104967534,LOC100704884,LOC106525288,LOC108244561,LOC101471106 coding downstream 41372 22240482 ~ 22244763 (+)
mipa LOC103368323,LOC101065051,LOC100704616 coding downstream 47845 22246955 ~ 22248730 (+)
LOC120558509 NA coding downstream 189439 22388549 ~ 22397004 (+)
LOC120559492 def6 coding downstream 302346 22501456 ~ 22515546 (+)
LOC120558498 NA non-coding upstream 7885 22173144 ~ 22176411 (+)
G52035 NA non-coding upstream 46964 22111469 ~ 22137332 (+)
G52031 naa10 non-coding upstream 77351 22105645 ~ 22106945 (+)
LOC120558642 NA non-coding upstream 98063 22085266 ~ 22086233 (+)
G52006 NA non-coding upstream 152777 22031209 ~ 22031519 (+)
G52060 LOC104967533,LOC103368342 non-coding downstream 36046 22235156 ~ 22237182 (+)
G52064 NA non-coding downstream 55185 22254295 ~ 22254973 (+)
G52054 NA non-coding downstream 141273 22340383 ~ 22346646 (+)
G52179 NA non-coding downstream 275120 22474230 ~ 22476314 (+)
G52185 NA non-coding downstream 281433 22480543 ~ 22484101 (+)
LOC120558641 LOC103363734,LOC104967523 other upstream 89406 22090197 ~ 22094890 (+)
avpr2aa avpr2,LOC105897269 other upstream 123651 22046763 ~ 22060645 (+)
G51926 NA other upstream 280219 21903542 ~ 21904077 (+)
LOC120559721 cacna1s,LOC103368470 other upstream 376382 21783217 ~ 21807914 (+)
birc5b LOC107086758,LOC102206178,LOC102295711,LOC100709346,LOC106950807,LOC103141143,LOC106920826 other upstream 464173 21717109 ~ 21720123 (+)
G52210 LOC104964406,LOC106525460,LOC105931770 other downstream 357219 22556329 ~ 22560328 (+)
LOC120559933 NA other downstream 363044 22562154 ~ 22562521 (+)
lamtor5 lamtor5,LOC102787529 other downstream 642934 22842044 ~ 22846938 (+)
atxn7l2b kcnc4 other downstream 792142 22991252 ~ 23068479 (+)
tmem201 tmem201,LOC102777799 other downstream 1547255 23746365 ~ 23765165 (+)

Expression


Co-expression Network